RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 SLC25A15Q9Y619 301 aa7.2□□□□□ -1.26
CDH1-205ENST00000562836 MDC1Q14676 2089 aaKnown RBP7.19□□□□□ -1.26
CDH1-205ENST00000562836 FAM223BA6NKX1 122 aa7.19□□□□□ -1.26
CDH1-205ENST00000562836 HBDP02042 147 aa7.19□□□□□ -1.26
CDH1-205ENST00000562836 LINC01600Q96MT4 127 aa7.19□□□□□ -1.26
CDH1-205ENST00000562836 TAC3Q9UHF0 121 aa7.19□□□□□ -1.26
CDH1-205ENST00000562836 SMKR1H3BMG3 65 aa7.19□□□□□ -1.26
CDH1-205ENST00000562836 H7C2G1 150 aa7.19□□□□□ -1.26
CDH1-205ENST00000562836 PRSS1P07477 247 aa7.19□□□□□ -1.26
CDH1-205ENST00000562836 SUB1P53999 127 aaKnown RBP eCLIP7.19□□□□□ -1.26
CDH1-205ENST00000562836 KTN1-AS1Q86SY8 53 aa7.19□□□□□ -1.26
CDH1-205ENST00000562836 PAXXQ9BUH6 204 aa7.19□□□□□ -1.26
CDH1-205ENST00000562836 BPESC1Q9GZL8 116 aa7.19□□□□□ -1.26
CDH1-205ENST00000562836 SHANK1Q9Y566 2161 aa7.19□□□□□ -1.26
CDH1-205ENST00000562836 C20orf197Q8N268 126 aa7.18□□□□□ -1.26
CDH1-205ENST00000562836 PSMG3-AS1Q96PY0 264 aa7.18□□□□□ -1.26
CDH1-205ENST00000562836 ZNF492Q9P255 531 aa7.18□□□□□ -1.26
CDH1-205ENST00000562836 LAMTOR3Q9UHA4 124 aa7.18□□□□□ -1.26
CDH1-205ENST00000562836 ALPK2Q86TB3 2170 aa7.18□□□□□ -1.26
CDH1-205ENST00000562836 BEAN1Q3B7T3 259 aa7.18□□□□□ -1.26
CDH1-205ENST00000562836 DEFB121Q5J5C9 76 aa7.18□□□□□ -1.26
CDH1-205ENST00000562836 FOXQ1Q9C009 403 aa7.18□□□□□ -1.26
CDH1-205ENST00000562836 TRAV40A0A0B4J280 105 aa7.17□□□□□ -1.26
CDH1-205ENST00000562836 CFC1BP0CG36 223 aa7.17□□□□□ -1.26
CDH1-205ENST00000562836 CFC1P0CG37 223 aa7.17□□□□□ -1.26
CDH1-205ENST00000562836 KRTAP27-1Q3LI81 207 aa7.17□□□□□ -1.26
CDH1-205ENST00000562836 TIMM17AQ99595 171 aa7.17□□□□□ -1.26
CDH1-205ENST00000562836 LGALS3P17931 250 aaKnown RBP7.17□□□□□ -1.26
CDH1-205ENST00000562836 FGF12P61328 243 aa7.17□□□□□ -1.26
CDH1-205ENST00000562836 SDIM1Q6ZPB5 146 aa7.17□□□□□ -1.26
CDH1-205ENST00000562836 ZNF818PQ6ZRF7 136 aa7.17□□□□□ -1.26
CDH1-205ENST00000562836 THAP8Q8NA92 274 aa7.17□□□□□ -1.26
CDH1-205ENST00000562836 R4GMQ9 66 aa7.17□□□□□ -1.26
CDH1-205ENST00000562836 COL4A3Q01955 1670 aa7.17□□□□□ -1.26
CDH1-205ENST00000562836 COL4A6Q14031 1691 aa7.17□□□□□ -1.26
CDH1-205ENST00000562836 IGHV1-58A0A0C4DH39 117 aa7.16□□□□□ -1.26
CDH1-205ENST00000562836 C4orf51C9J302 202 aa7.16□□□□□ -1.26
CDH1-205ENST00000562836 PVRIGQ6DKI7 326 aa7.16□□□□□ -1.26
CDH1-205ENST00000562836 TMEM75Q8N9X5 138 aa7.16□□□□□ -1.26
CDH1-205ENST00000562836 PRO1854Q9UHT4 67 aa7.16□□□□□ -1.26
CDH1-205ENST00000562836 A0A1B0GWA3 101 aa7.16□□□□□ -1.26
CDH1-205ENST00000562836 M0R378 163 aa7.16□□□□□ -1.26
CDH1-205ENST00000562836 Q8N2B8 174 aa7.16□□□□□ -1.26
CDH1-205ENST00000562836 SRXN1Q9BYN0 137 aa7.16□□□□□ -1.26
CDH1-205ENST00000562836 DIDO1Q9BTC0 2240 aaKnown RBP7.16□□□□□ -1.26
CDH1-205ENST00000562836 TRBV19A0A075B6N1 114 aa7.15□□□□□ -1.26
CDH1-205ENST00000562836 IGKV1D-43A0A0B4J1Z2 117 aa7.15□□□□□ -1.26
CDH1-205ENST00000562836 H7C423 109 aa7.15□□□□□ -1.26
CDH1-205ENST00000562836 PRSS2P07478 247 aa7.15□□□□□ -1.26
CDH1-205ENST00000562836 CTXN1P60606 82 aa7.15□□□□□ -1.26
CDH1-205ENST00000562836 COPS9Q8WXC6 57 aa7.15□□□□□ -1.26
CDH1-205ENST00000562836 A0A087WVE0 104 aa7.15□□□□□ -1.26
CDH1-205ENST00000562836 H7BZZ5 65 aa7.15□□□□□ -1.26
CDH1-205ENST00000562836 TWIST1Q15672 202 aa7.15□□□□□ -1.26
CDH1-205ENST00000562836 C16orf47Q6ZP98 133 aaPredicted RBP7.15□□□□□ -1.26
CDH1-205ENST00000562836 SEM1Q6ZVN7 128 aa7.15□□□□□ -1.26
CDH1-205ENST00000562836 Q8N7P7 452 aa7.15□□□□□ -1.26
CDH1-205ENST00000562836 PRR14LQ5THK1 2151 aa7.15□□□□□ -1.27
CDH1-205ENST00000562836 KIAA1549LQ6ZVL6 1849 aa7.15□□□□□ -1.27
CDH1-205ENST00000562836 A0A0B4J2C4 111 aa7.14□□□□□ -1.27
CDH1-205ENST00000562836 XCL1P47992 114 aa7.14□□□□□ -1.27
CDH1-205ENST00000562836 XCL2Q9UBD3 114 aa7.14□□□□□ -1.27
CDH1-205ENST00000562836 PRB4P10163 310 aaPredicted RBP7.14□□□□□ -1.27
CDH1-205ENST00000562836 SCGB1D4Q6XE38 83 aa7.14□□□□□ -1.27
CDH1-205ENST00000562836 Q8N8P6 123 aa7.14□□□□□ -1.27
CDH1-205ENST00000562836 MDFIQ99750 246 aa7.14□□□□□ -1.27
CDH1-205ENST00000562836 MLANAQ16655 118 aa7.14□□□□□ -1.27
CDH1-205ENST00000562836 FAM19A3Q7Z5A8 133 aa7.14□□□□□ -1.27
CDH1-205ENST00000562836 A0A0A0MQY5 61 aa7.13□□□□□ -1.27
CDH1-205ENST00000562836 TMEM30CPA0ZSE6 113 aa7.13□□□□□ -1.27
CDH1-205ENST00000562836 J3QT63 122 aa7.13□□□□□ -1.27
CDH1-205ENST00000562836 IGHG2P01859 326 aa7.13□□□□□ -1.27
CDH1-205ENST00000562836 MRPS36P82909 103 aaKnown RBP7.13□□□□□ -1.27
CDH1-205ENST00000562836 FAM229BQ4G0N7 80 aa7.13□□□□□ -1.27
CDH1-205ENST00000562836 SLC25A29Q8N8R3 303 aa7.13□□□□□ -1.27
CDH1-205ENST00000562836 WNT9BO14905 357 aa7.13□□□□□ -1.27
CDH1-205ENST00000562836 RSPO4Q2I0M5 234 aaPredicted RBP7.13□□□□□ -1.27
CDH1-205ENST00000562836 CCL28Q9NRJ3 127 aa7.13□□□□□ -1.27
CDH1-205ENST00000562836 TMEM256-PLSCR3K7ERE1 68 aa7.12□□□□□ -1.27
CDH1-205ENST00000562836 ZNF134P52741 427 aa7.12□□□□□ -1.27
CDH1-205ENST00000562836 Q6ZS52 159 aa7.12□□□□□ -1.27
CDH1-205ENST00000562836 FANCD2OSQ96PS1 177 aa7.12□□□□□ -1.27
CDH1-205ENST00000562836 A0A087WZ39 114 aa7.12□□□□□ -1.27
CDH1-205ENST00000562836 RBMY1BA6NDE4 496 aaKnown RBP7.12□□□□□ -1.27
CDH1-205ENST00000562836 RBMY1EA6NEQ0 496 aaKnown RBP7.12□□□□□ -1.27
CDH1-205ENST00000562836 NDUFA3O95167 84 aa7.12□□□□□ -1.27
CDH1-205ENST00000562836 RBMY1DP0C7P1 496 aaKnown RBP7.12□□□□□ -1.27
CDH1-205ENST00000562836 RBMY1A1P0DJD3 496 aaKnown RBP7.12□□□□□ -1.27
CDH1-205ENST00000562836 RBMY1CP0DJD4 496 aa7.12□□□□□ -1.27
CDH1-205ENST00000562836 RBMY1FQ15415 496 aaKnown RBP7.12□□□□□ -1.27
CDH1-205ENST00000562836 Q1RN00 199 aa7.12□□□□□ -1.27
CDH1-205ENST00000562836 TCF20Q9UGU0 1960 aaKnown RBP7.11□□□□□ -1.27
CDH1-205ENST00000562836 IGKV3D-7A0A0C4DH55 119 aa7.11□□□□□ -1.27
CDH1-205ENST00000562836 PMS2P5A8MQ11 134 aa7.11□□□□□ -1.27
CDH1-205ENST00000562836 FAM222AQ5U5X8 452 aa7.11□□□□□ -1.27
CDH1-205ENST00000562836 MKXQ8IYA7 352 aa7.11□□□□□ -1.27
CDH1-205ENST00000562836 NRACQ8N912 160 aa7.11□□□□□ -1.27
CDH1-205ENST00000562836 MRPL35Q9NZE8 188 aaKnown RBP7.11□□□□□ -1.27
CDH1-205ENST00000562836 IGKV1D-13A0A0B4J2D9 117 aa7.11□□□□□ -1.27
CDH1-205ENST00000562836 ZNF73O43830 326 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms