RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 SYNMO15061 1565 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 ANK1P16157 1881 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 FAM135BQ49AJ0 1406 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 PCLOQ9Y6V0 5065 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 WDR97A6NE52 1622 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.05□□□□□ -2.42
CHD9-207ENST00000562806 NEBP20929 6669 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 LOC107986453A0A1B0GWG9 222 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 IFITM5A6NNB3 132 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 TMEM238C9JI98 176 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 PPP5D1E7EU14 171 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 GABARAPH6UMI1 98 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 BCL2P10415 239 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 SERPINB1P30740 379 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 C5orf56Q8N8D9 126 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 CDC26Q8NHZ8 85 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 MRPL36Q9P0J6 103 aaKnown RBP-0.05□□□□□ -2.42
CHD9-207ENST00000562806 PIEZO1Q92508 2521 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 FGD6Q6ZV73 1430 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 KDM6BO15054 1643 aa-0.05□□□□□ -2.42
CHD9-207ENST00000562806 DLC1Q96QB1 1528 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.06□□□□□ -2.42
CHD9-207ENST00000562806 LOC107984156A0A0G2JMH3 177 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 TRBV27A0A0K0K1C4 114 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 LOC101927531A0A1B0GV80 90 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 TMEM30CPA0ZSE6 113 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 MAP1LC3B2A6NCE7 125 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 FXYD1O00168 92 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 PFDN1O60925 122 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 SPINK1P00995 79 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 SRP9P49458 86 aaKnown RBP-0.06□□□□□ -2.42
CHD9-207ENST00000562806 CRYBA4P53673 196 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 DCUN1D2Q6PH85 259 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 LINC00305Q7Z4B0 112 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 ARL17AQ8IVW1 177 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 OR8J3Q8NGG0 315 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 DMAC1Q96GE9 116 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 OTOGQ6ZRI0 2925 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 NUP210Q8TEM1 1887 aaPredicted RBP-0.06□□□□□ -2.42
CHD9-207ENST00000562806 ROCK1Q13464 1354 aa-0.06□□□□□ -2.42
CHD9-207ENST00000562806 COL7A1Q02388 2944 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 HRNRQ86YZ3 2850 aaPredicted RBP-0.07□□□□□ -2.42
CHD9-207ENST00000562806 RREB1Q92766 1687 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 TRAV13-1A0A0B4J241 112 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 TMEM189A5PLL7 270 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 TPST1O60507 370 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 G0S2P27469 103 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 S100A11P31949 105 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 ETV6P41212 452 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 GTF2A1P52655 376 aaPredicted RBP-0.07□□□□□ -2.42
CHD9-207ENST00000562806 LSM3P62310 102 aaKnown RBP-0.07□□□□□ -2.42
CHD9-207ENST00000562806 KLKP1Q107X0 134 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 RHOHQ15669 191 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 Q5BKY6 102 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 Q5XG85 94 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 TRIQKQ629K1 86 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 PPP1R2P3Q6NXS1 205 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 HRCT1Q6UXD1 115 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 VMO1Q7Z5L0 202 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 TEX29Q8N6K0 151 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 MORN4Q8NDC4 146 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 SMIM7Q9BQ49 75 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 LXNQ9BS40 222 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 CCDC32Q9BV29 185 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 PROK2Q9HC23 129 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 TMEM14BQ9NUH8 114 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 GID8Q9NWU2 228 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 FKBP11Q9NYL4 201 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 MUC2Q02817 5179 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 RBBP6Q7Z6E9 1792 aaKnown RBP-0.07□□□□□ -2.42
CHD9-207ENST00000562806 HERC1Q15751 4861 aa-0.07□□□□□ -2.42
CHD9-207ENST00000562806 NSD1Q96L73 2696 aaPredicted RBP-0.08□□□□□ -2.42
CHD9-207ENST00000562806 CDK12Q9NYV4 1490 aaPredicted RBP-0.08□□□□□ -2.42
CHD9-207ENST00000562806 LRP5O75197 1615 aa-0.08□□□□□ -2.42
CHD9-207ENST00000562806 A0A096LNT2 108 aa-0.08□□□□□ -2.42
CHD9-207ENST00000562806 A0A0G2JMM0 328 aa-0.08□□□□□ -2.42
CHD9-207ENST00000562806 TRBV7-6A0A0J9YX20 115 aa-0.08□□□□□ -2.42
CHD9-207ENST00000562806 H3BMG7 143 aa-0.08□□□□□ -2.42
CHD9-207ENST00000562806 PGRMC1O00264 195 aaKnown RBP-0.08□□□□□ -2.42
CHD9-207ENST00000562806 EDF1O60869 148 aaKnown RBP-0.08□□□□□ -2.42
CHD9-207ENST00000562806 FAM107AO95990 144 aa-0.08□□□□□ -2.42
CHD9-207ENST00000562806 TMEM78Q5T7P6 136 aa-0.08□□□□□ -2.42
CHD9-207ENST00000562806 LYPD5Q6UWN5 251 aa-0.08□□□□□ -2.42
CHD9-207ENST00000562806 COMMD3Q9UBI1 195 aa-0.08□□□□□ -2.42
CHD9-207ENST00000562806 KNTC1P50748 2209 aa-0.08□□□□□ -2.42
CHD9-207ENST00000562806 TPRP12270 2363 aaKnown RBP-0.08□□□□□ -2.42
CHD9-207ENST00000562806 TRPM7Q96QT4 1865 aa-0.08□□□□□ -2.42
CHD9-207ENST00000562806 KMT2CQ8NEZ4 4911 aaKnown RBP-0.08□□□□□ -2.42
CHD9-207ENST00000562806 CPDO75976 1380 aa-0.08□□□□□ -2.42
CHD9-207ENST00000562806 MAP2P11137 1827 aaKnown RBP-0.08□□□□□ -2.42
CHD9-207ENST00000562806 AFDNP55196 1824 aaKnown RBP-0.08□□□□□ -2.42
CHD9-207ENST00000562806 SPTBP11277 2137 aa-0.08□□□□□ -2.42
CHD9-207ENST00000562806 ZFYVE26Q68DK2 2539 aa-0.09□□□□□ -2.42
CHD9-207ENST00000562806 FER1L6Q2WGJ9 1857 aa-0.09□□□□□ -2.42
CHD9-207ENST00000562806 KIAA1109Q2LD37 5005 aa-0.09□□□□□ -2.42
CHD9-207ENST00000562806 E5RI56 91 aa-0.09□□□□□ -2.42
CHD9-207ENST00000562806 E7EQ34 232 aa-0.09□□□□□ -2.42
CHD9-207ENST00000562806 CDC42EP2O14613 210 aa-0.09□□□□□ -2.42
CHD9-207ENST00000562806 IGKCP01834 107 aa-0.09□□□□□ -2.42
CHD9-207ENST00000562806 SLC25A4P12235 298 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms