RNA–Protein interactions for RNA: ENST00000561442.5

USP3-221, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-221ENST00000561442 GGTLC3B5MD39 225 aa10.36□□□□□ -0.75
USP3-221ENST00000561442 PRM2P04554 102 aa10.36□□□□□ -0.75
USP3-221ENST00000561442 MIFP14174 115 aa10.36□□□□□ -0.75
USP3-221ENST00000561442 GFI1BQ5VTD9 330 aa10.36□□□□□ -0.75
USP3-221ENST00000561442 C9orf47Q6ZRZ4 202 aa10.36□□□□□ -0.75
USP3-221ENST00000561442 GOLT1AQ6ZVE7 132 aa10.36□□□□□ -0.75
USP3-221ENST00000561442 MUC7Q8TAX7 377 aa10.36□□□□□ -0.75
USP3-221ENST00000561442 RXFP4Q8TDU9 374 aa10.36□□□□□ -0.75
USP3-221ENST00000561442 LINC00477Q96M19 166 aa10.36□□□□□ -0.75
USP3-221ENST00000561442 NIPSNAP3BQ9BS92 247 aa10.36□□□□□ -0.75
USP3-221ENST00000561442 YTHDF2Q9Y5A9 579 aaKnown RBP10.36□□□□□ -0.75
USP3-221ENST00000561442 DYNC2H1Q8NCM8 4307 aaKnown RBP10.35□□□□□ -0.75
USP3-221ENST00000561442 C7orf77A4D0Y5 90 aa10.35□□□□□ -0.75
USP3-221ENST00000561442 TMEM250H0YL14 139 aa10.35□□□□□ -0.75
USP3-221ENST00000561442 M0R036 132 aa10.35□□□□□ -0.75
USP3-221ENST00000561442 MT-ND4LP03901 98 aa10.35□□□□□ -0.75
USP3-221ENST00000561442 SUMO1P63165 101 aaKnown RBP10.35□□□□□ -0.75
USP3-221ENST00000561442 CCL20P78556 96 aa10.35□□□□□ -0.75
USP3-221ENST00000561442 ZFAND6Q6FIF0 208 aa10.35□□□□□ -0.75
USP3-221ENST00000561442 ODF3Q96PU9 254 aa10.35□□□□□ -0.75
USP3-221ENST00000561442 LINC01587Q99440 93 aa10.35□□□□□ -0.75
USP3-221ENST00000561442 C11orf68Q9H3H3 251 aaKnown RBP10.35□□□□□ -0.75
USP3-221ENST00000561442 RPS10P5Q9NQ39 176 aa10.35□□□□□ -0.75
USP3-221ENST00000561442 ZNF705GA8MUZ8 300 aaPredicted RBP10.34□□□□□ -0.75
USP3-221ENST00000561442 ZNF138P52744 262 aa10.34□□□□□ -0.75
USP3-221ENST00000561442 EMP1P54849 157 aa10.34□□□□□ -0.75
USP3-221ENST00000561442 TMEM88Q6PEY1 159 aa10.34□□□□□ -0.75
USP3-221ENST00000561442 CBLN2Q8IUK8 224 aa10.34□□□□□ -0.75
USP3-221ENST00000561442 C5orf17Q8NAS9 161 aa10.34□□□□□ -0.75
USP3-221ENST00000561442 IL17DQ8TAD2 202 aa10.34□□□□□ -0.75
USP3-221ENST00000561442 TVP23CQ96ET8 276 aa10.34□□□□□ -0.75
USP3-221ENST00000561442 TMEM242Q9NWH2 141 aa10.34□□□□□ -0.75
USP3-221ENST00000561442 ZNF492Q9P255 531 aa10.34□□□□□ -0.75
USP3-221ENST00000561442 GNG13Q9P2W3 67 aa10.34□□□□□ -0.75
USP3-221ENST00000561442 TRAV8-1A0A0A6YYK1 113 aa10.33□□□□□ -0.76
USP3-221ENST00000561442 TRAV12-3A0A0B4J271 114 aa10.33□□□□□ -0.76
USP3-221ENST00000561442 A0A1W2PRE2 83 aa10.33□□□□□ -0.76
USP3-221ENST00000561442 RBAKDNA6NC62 111 aa10.33□□□□□ -0.76
USP3-221ENST00000561442 HTN1P15515 57 aa10.33□□□□□ -0.76
USP3-221ENST00000561442 RNASE4P34096 147 aaKnown RBP10.33□□□□□ -0.76
USP3-221ENST00000561442 PRR9Q5T870 116 aa10.33□□□□□ -0.76
USP3-221ENST00000561442 FAM19A4Q96LR4 140 aa10.33□□□□□ -0.76
USP3-221ENST00000561442 SGK494Q96LW2 274 aa10.33□□□□□ -0.76
USP3-221ENST00000561442 NEU1Q99519 415 aa10.33□□□□□ -0.76
USP3-221ENST00000561442 PLECQ15149 4684 aaKnown RBP10.32□□□□□ -0.76
USP3-221ENST00000561442 C7orf71A4D174 169 aa10.32□□□□□ -0.76
USP3-221ENST00000561442 SMIM9A6NGZ8 99 aa10.32□□□□□ -0.76
USP3-221ENST00000561442 COLCA2A8K830 154 aa10.32□□□□□ -0.76
USP3-221ENST00000561442 TCRAP04437 139 aa10.32□□□□□ -0.76
USP3-221ENST00000561442 NANOS2P60321 138 aaKnown RBP10.32□□□□□ -0.76
USP3-221ENST00000561442 RRN3P1Q2M238 152 aa10.32□□□□□ -0.76
USP3-221ENST00000561442 ZFAND2AQ8N6M9 145 aa10.32□□□□□ -0.76
USP3-221ENST00000561442 EPDR1Q9UM22 224 aa10.32□□□□□ -0.76
USP3-221ENST00000561442 KLLNB2CW77 178 aa10.31□□□□□ -0.76
USP3-221ENST00000561442 GPX1P07203 203 aa10.31□□□□□ -0.76
USP3-221ENST00000561442 CRISP2P16562 243 aa10.31□□□□□ -0.76
USP3-221ENST00000561442 RAB5BP61020 215 aa10.31□□□□□ -0.76
USP3-221ENST00000561442 MEF2BQ02080 365 aaPredicted RBP10.31□□□□□ -0.76
USP3-221ENST00000561442 CST9LP1Q5W188 147 aa10.31□□□□□ -0.76
USP3-221ENST00000561442 TMEM256Q8N2U0 113 aa10.31□□□□□ -0.76
USP3-221ENST00000561442 ARL6IP6Q8N6S5 226 aa10.31□□□□□ -0.76
USP3-221ENST00000561442 CYB561D1Q8N8Q1 229 aa10.31□□□□□ -0.76
USP3-221ENST00000561442 C11orf45Q8TAV5 145 aa10.31□□□□□ -0.76
USP3-221ENST00000561442 CTDSP1Q9GZU7 261 aa10.31□□□□□ -0.76
USP3-221ENST00000561442 CELA1Q9UNI1 258 aa10.31□□□□□ -0.76
USP3-221ENST00000561442 ARL2-SNX15V9GYD0 113 aa10.31□□□□□ -0.76
USP3-221ENST00000561442 C3orf84H3BNL1 204 aa10.3□□□□□ -0.76
USP3-221ENST00000561442 H7BYZ3 331 aa10.3□□□□□ -0.76
USP3-221ENST00000561442 PAGE4O60829 102 aa10.3□□□□□ -0.76
USP3-221ENST00000561442 AZU1P20160 251 aa10.3□□□□□ -0.76
USP3-221ENST00000561442 TAS2R60P59551 318 aa10.3□□□□□ -0.76
USP3-221ENST00000561442 Q6ZQT7 251 aa10.3□□□□□ -0.76
USP3-221ENST00000561442 C20orf144Q9BQM9 153 aa10.3□□□□□ -0.76
USP3-221ENST00000561442 TRAV34A0A0B4J273 112 aa10.29□□□□□ -0.76
USP3-221ENST00000561442 C1orf196B1AJZ1 125 aa10.29□□□□□ -0.76
USP3-221ENST00000561442 K7EQM0 130 aa10.29□□□□□ -0.76
USP3-221ENST00000561442 PEX7O00628 323 aa10.29□□□□□ -0.76
USP3-221ENST00000561442 PDE6DO43924 150 aa10.29□□□□□ -0.76
USP3-221ENST00000561442 ATP5G3P48201 142 aa10.29□□□□□ -0.76
USP3-221ENST00000561442 HIST1H2BAQ96A08 127 aa10.29□□□□□ -0.76
USP3-221ENST00000561442 LINC00479Q96M42 142 aa10.29□□□□□ -0.76
USP3-221ENST00000561442 ATG101Q9BSB4 218 aa10.29□□□□□ -0.76
USP3-221ENST00000561442 BIN3Q9NQY0 253 aa10.29□□□□□ -0.76
USP3-221ENST00000561442 NAT8Q9UHE5 227 aa10.29□□□□□ -0.76
USP3-221ENST00000561442 SERTM2A0A1B0GWG4 89 aa10.28□□□□□ -0.76
USP3-221ENST00000561442 TMEM189A5PLL7 270 aa10.28□□□□□ -0.76
USP3-221ENST00000561442 F6UZH7 168 aa10.28□□□□□ -0.76
USP3-221ENST00000561442 CASC10Q5T4H9 136 aa10.28□□□□□ -0.76
USP3-221ENST00000561442 PRNTQ86SH4 94 aa10.28□□□□□ -0.76
USP3-221ENST00000561442 PSG8Q9UQ74 426 aa10.28□□□□□ -0.76
USP3-221ENST00000561442 TRBV7-9A0A0J9YWB2 115 aa10.27□□□□□ -0.77
USP3-221ENST00000561442 ZNF324O75467 553 aaPredicted RBP10.27□□□□□ -0.77
USP3-221ENST00000561442 IGLV2-11P01706 119 aa10.27□□□□□ -0.77
USP3-221ENST00000561442 FAM222AQ5U5X8 452 aa10.27□□□□□ -0.77
USP3-221ENST00000561442 SDF2L1Q9HCN8 221 aa10.27□□□□□ -0.77
USP3-221ENST00000561442 LENEPQ9Y5L5 61 aa10.27□□□□□ -0.77
USP3-221ENST00000561442 ZNF727A8MUV8 499 aa10.26□□□□□ -0.77
USP3-221ENST00000561442 SPART-AS1P0CW21 52 aa10.26□□□□□ -0.77
USP3-221ENST00000561442 RAB5AP20339 215 aa10.26□□□□□ -0.77
USP3-221ENST00000561442 C12orf74Q32Q52 190 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 358.2 ms