RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 MEF2BQ02080 365 aaPredicted RBP2.89□□□□□ -1.95
LRRC28-222ENST00000561431 HSD52Q0P140 79 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 CHD3Q12873 2000 aaKnown RBP2.89□□□□□ -1.95
LRRC28-222ENST00000561431 VMA21Q3ZAQ7 101 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 ABCA11PQ4W5N1 156 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 LRRC10Q5BKY1 277 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 OR2T2Q6IF00 324 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 LCN12Q6JVE5 192 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 RPL22L1Q6P5R6 122 aaKnown RBP2.89□□□□□ -1.95
LRRC28-222ENST00000561431 TMEM14EPQ6UXP3 125 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 LINC00173Q6ZV60 143 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 GTF2H5Q6ZYL4 71 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 FAM19A3Q7Z5A8 133 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 ALPK2Q86TB3 2170 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 OR5AS1Q8N127 324 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 TMEM75Q8N9X5 138 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 OR4S1Q8NGB4 309 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 RPS4Y2Q8TD47 263 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 RTN4IP1Q8WWV3 396 aaPredicted RBP2.89□□□□□ -1.95
LRRC28-222ENST00000561431 GNPNAT1Q96EK6 184 aaPredicted RBP2.89□□□□□ -1.95
LRRC28-222ENST00000561431 CARD19Q96LW7 228 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 ZNF184Q99676 751 aaPredicted RBP2.89□□□□□ -1.95
LRRC28-222ENST00000561431 PAXXQ9BUH6 204 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 TMEM191AQ9H0A3 160 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 GABARAPL1Q9H0R8 117 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 GTSF1LQ9H1H1 148 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 MED28Q9H204 178 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 Q9H521 79 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 NUFIP1Q9UHK0 495 aaKnown RBP2.89□□□□□ -1.95
LRRC28-222ENST00000561431 CYSLTR1Q9Y271 337 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 ANK3Q12955 4377 aaKnown RBP2.89□□□□□ -1.95
LRRC28-222ENST00000561431 TENM1Q9UKZ4 2725 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 SONP18583 2426 aaKnown RBP2.89□□□□□ -1.95
LRRC28-222ENST00000561431 COL6A5A8TX70 2615 aa2.89□□□□□ -1.95
LRRC28-222ENST00000561431 CSPG4Q6UVK1 2322 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 JMJD1CQ15652 2540 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 RTTNQ86VV8 2226 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 STAB1Q9NY15 2570 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 IGLV8-61A0A075B6I0 122 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 IGKV1-27A0A075B6S5 117 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 IGHV7-81A0A0B4J1V7 117 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 C1orf196B1AJZ1 125 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 ZNF670-ZNF695F2Z2N8 137 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 GABARAPH6UMI1 98 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 M0R129 80 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 M0R135 149 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 GSTZ1O43708 216 aaPredicted RBP2.88□□□□□ -1.95
LRRC28-222ENST00000561431 MPC2O95563 127 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 FSTL3O95633 263 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 HLA-DPB1P04440 258 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 IGLC6P0CF74 106 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 LINC00694P0DN24 101 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 ZNF823P16415 610 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 S100A2P29034 98 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 INPP1P49441 399 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 DAPP51397 102 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 HERVK_113P63121 156 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 KIAA0087Q14695 138 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 UBE2NLQ5JXB2 153 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 LYRM7Q5U5X0 104 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 C12orf73Q69YU5 71 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 FOXI2Q6ZQN5 318 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 PACRGLQ8N7B6 248 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 OTOSQ8NHW6 89 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 MRPL30Q8TCC3 161 aaKnown RBP2.88□□□□□ -1.95
LRRC28-222ENST00000561431 DEDD2Q8WXF8 326 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 SPTSSAQ969W0 71 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 ZNF799Q96GE5 643 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 OR4C12Q96R67 309 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 TM2D3Q9BRN9 247 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 SPANXDQ9BXN6 97 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 TMEM106BQ9NUM4 274 aa2.88□□□□□ -1.95
LRRC28-222ENST00000561431 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.87□□□□□ -1.95
LRRC28-222ENST00000561431 LOC102724200A0A096LPH7 203 aaPredicted RBP2.87□□□□□ -1.95
LRRC28-222ENST00000561431 TRBV7-6A0A0J9YX20 115 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 IGHV3-64DA0A0J9YX35 117 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 LOC107984640A0A0U1RRK4 108 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 PNMA8CA0A1B0GUJ8 204 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 M0R381 172 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 LST1O00453 97 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 GNGT2O14610 69 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 COX7A2P2O60397 106 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 ZNF780AO75290 641 aaPredicted RBP2.87□□□□□ -1.95
LRRC28-222ENST00000561431 IGLV3-1P01715 115 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 PSMB8P28062 276 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 TGFBR1P36897 503 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 OPRK1P41145 380 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 TMBIM6P55061 237 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 DEFA3P59666 94 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 HERVK_113P61574 105 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 MSMO1Q15800 293 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 RTL8BQ17RB0 113 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 TMEM155Q4W5P6 130 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 CLLU1Q5K131 121 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 LCE3CQ5T5A8 94 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 NXNL2Q5VZ03 156 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 WDR86Q86TI4 376 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 MKXQ8IYA7 352 aa2.87□□□□□ -1.95
LRRC28-222ENST00000561431 DRAM1Q8N682 238 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms