RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 PRNTQ86SH4 94 aa6.85□□□□□ -1.31
HERC1-206ENST00000559996 Q86TA4 180 aa6.85□□□□□ -1.31
HERC1-206ENST00000559996 STHQ8IWL8 128 aa6.85□□□□□ -1.31
HERC1-206ENST00000559996 OCC1Q8TAD7 63 aa6.85□□□□□ -1.31
HERC1-206ENST00000559996 TREM1Q9NP99 234 aa6.85□□□□□ -1.31
HERC1-206ENST00000559996 LENEPQ9Y5L5 61 aa6.85□□□□□ -1.31
HERC1-206ENST00000559996 C9JCJ5 164 aa6.84□□□□□ -1.31
HERC1-206ENST00000559996 K7EN84 100 aa6.84□□□□□ -1.31
HERC1-206ENST00000559996 M0R2Z0 102 aa6.84□□□□□ -1.31
HERC1-206ENST00000559996 S100A9P06702 114 aaKnown RBP6.84□□□□□ -1.31
HERC1-206ENST00000559996 SFTA3P0C7M3 94 aa6.84□□□□□ -1.31
HERC1-206ENST00000559996 RPL35AP18077 110 aaKnown RBP6.84□□□□□ -1.31
HERC1-206ENST00000559996 TMEM78Q5T7P6 136 aa6.84□□□□□ -1.31
HERC1-206ENST00000559996 BAGE2Q86Y30 109 aa6.84□□□□□ -1.31
HERC1-206ENST00000559996 TMEM183AQ8IXX5 376 aa6.84□□□□□ -1.31
HERC1-206ENST00000559996 ZFP30Q9Y2G7 519 aa6.84□□□□□ -1.31
HERC1-206ENST00000559996 TRAV12-2A0A075B6T6 113 aa6.83□□□□□ -1.32
HERC1-206ENST00000559996 FBLL1A6NHQ2 334 aaKnown RBP6.83□□□□□ -1.32
HERC1-206ENST00000559996 K7EQM0 130 aa6.83□□□□□ -1.32
HERC1-206ENST00000559996 SPINK13Q1W4C9 94 aa6.83□□□□□ -1.32
HERC1-206ENST00000559996 Q6AWC8 147 aa6.83□□□□□ -1.32
HERC1-206ENST00000559996 C1orf158Q8N1D5 194 aa6.83□□□□□ -1.32
HERC1-206ENST00000559996 NHLRC2Q8NBF2 726 aa6.83□□□□□ -1.32
HERC1-206ENST00000559996 ZC2HC1AQ96GY0 325 aa6.83□□□□□ -1.32
HERC1-206ENST00000559996 KRTAP9-9Q9BYP9 154 aa6.83□□□□□ -1.32
HERC1-206ENST00000559996 KRTAP9-4Q9BYQ2 154 aa6.83□□□□□ -1.32
HERC1-206ENST00000559996 SDF2L1Q9HCN8 221 aa6.83□□□□□ -1.32
HERC1-206ENST00000559996 C11orf21Q9P2W6 132 aa6.83□□□□□ -1.32
HERC1-206ENST00000559996 LOC102724200A0A096LPH7 203 aaPredicted RBP6.82□□□□□ -1.32
HERC1-206ENST00000559996 ZNF727A8MUV8 499 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 GCGP01275 180 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 FRMD6-AS1P0C7T7 363 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 CDKN1BP46527 198 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 CEBPGP53567 150 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 UBE2G1P62253 170 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 RPL23P62829 140 aaKnown RBP6.82□□□□□ -1.32
HERC1-206ENST00000559996 BTN1A1Q13410 526 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 OR5I1Q13606 314 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 NDUFA5Q16718 116 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 ZNF674Q2M3X9 581 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 CENPWQ5EE01 88 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 SOHLH1Q5JUK2 328 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 SAPCD1Q5SSQ6 148 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 GFI1BQ5VTD9 330 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 LINC01551Q86U37 167 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 SMIM7Q9BQ49 75 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 MRPL18Q9H0U6 180 aaKnown RBP6.82□□□□□ -1.32
HERC1-206ENST00000559996 CSTL1Q9H114 145 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 LY96Q9Y6Y9 160 aa6.82□□□□□ -1.32
HERC1-206ENST00000559996 KIR2DL5BA0A0G2JN68 375 aa6.81□□□□□ -1.32
HERC1-206ENST00000559996 KIR2DL5BA0A0G2JPC4 375 aa6.81□□□□□ -1.32
HERC1-206ENST00000559996 C19orf71A6NCJ1 209 aa6.81□□□□□ -1.32
HERC1-206ENST00000559996 PRM2P04554 102 aa6.81□□□□□ -1.32
HERC1-206ENST00000559996 TMEM241Q24JQ0 296 aa6.81□□□□□ -1.32
HERC1-206ENST00000559996 FAM74A3Q4VXF1 159 aa6.81□□□□□ -1.32
HERC1-206ENST00000559996 MORN3Q6PF18 240 aaPredicted RBP6.81□□□□□ -1.32
HERC1-206ENST00000559996 KIR2DL5AQ8N109 375 aa6.81□□□□□ -1.32
HERC1-206ENST00000559996 KIR2DL5BQ8NHK3 375 aa6.81□□□□□ -1.32
HERC1-206ENST00000559996 SMIM12Q96EX1 92 aa6.81□□□□□ -1.32
HERC1-206ENST00000559996 SEC11CQ9BY50 192 aa6.81□□□□□ -1.32
HERC1-206ENST00000559996 TUBA4BQ9H853 241 aa6.81□□□□□ -1.32
HERC1-206ENST00000559996 XCL2Q9UBD3 114 aa6.81□□□□□ -1.32
HERC1-206ENST00000559996 CARHSP1Q9Y2V2 147 aaKnown RBP6.81□□□□□ -1.32
HERC1-206ENST00000559996 C7orf71A4D174 169 aa6.8□□□□□ -1.32
HERC1-206ENST00000559996 J3KRW8 73 aa6.8□□□□□ -1.32
HERC1-206ENST00000559996 GPX1P07203 203 aa6.8□□□□□ -1.32
HERC1-206ENST00000559996 RNASE4P34096 147 aaKnown RBP6.8□□□□□ -1.32
HERC1-206ENST00000559996 LEPP41159 167 aa6.8□□□□□ -1.32
HERC1-206ENST00000559996 GNG4P50150 75 aa6.8□□□□□ -1.32
HERC1-206ENST00000559996 SMUG1Q53HV7 270 aa6.8□□□□□ -1.32
HERC1-206ENST00000559996 ZNF705AQ6ZN79 300 aaPredicted RBP6.8□□□□□ -1.32
HERC1-206ENST00000559996 SBSPONQ8IVN8 264 aa6.8□□□□□ -1.32
HERC1-206ENST00000559996 NAT8Q9UHE5 227 aa6.8□□□□□ -1.32
HERC1-206ENST00000559996 TRAV12-3A0A0B4J271 114 aa6.79□□□□□ -1.32
HERC1-206ENST00000559996 IGKV3D-20A0A0C4DH25 116 aa6.79□□□□□ -1.32
HERC1-206ENST00000559996 F8W036 122 aa6.79□□□□□ -1.32
HERC1-206ENST00000559996 PAX4O43316 350 aa6.79□□□□□ -1.32
HERC1-206ENST00000559996 CA1P00915 261 aaPredicted RBP6.79□□□□□ -1.32
HERC1-206ENST00000559996 GHRHP01286 108 aa6.79□□□□□ -1.32
HERC1-206ENST00000559996 PFN1P07737 140 aaKnown RBP6.79□□□□□ -1.32
HERC1-206ENST00000559996 TSPOP30536 169 aa6.79□□□□□ -1.32
HERC1-206ENST00000559996 NUDT10Q8NFP7 164 aa6.79□□□□□ -1.32
HERC1-206ENST00000559996 ISOC2Q96AB3 205 aa6.79□□□□□ -1.32
HERC1-206ENST00000559996 NUDT11Q96G61 164 aa6.79□□□□□ -1.32
HERC1-206ENST00000559996 FABP5P3A8MUU1 101 aa6.78□□□□□ -1.32
HERC1-206ENST00000559996 SH2D1AO60880 128 aa6.78□□□□□ -1.32
HERC1-206ENST00000559996 AMBPP02760 352 aa6.78□□□□□ -1.32
HERC1-206ENST00000559996 AZU1P20160 251 aa6.78□□□□□ -1.32
HERC1-206ENST00000559996 NUTF2P61970 127 aaKnown RBP6.78□□□□□ -1.32
HERC1-206ENST00000559996 FAM231DQ6ZW35 169 aa6.78□□□□□ -1.32
HERC1-206ENST00000559996 RNF183Q96D59 192 aa6.78□□□□□ -1.32
HERC1-206ENST00000559996 C20orf144Q9BQM9 153 aa6.78□□□□□ -1.32
HERC1-206ENST00000559996 OVOL2Q9BRP0 275 aa6.78□□□□□ -1.32
HERC1-206ENST00000559996 LINC00467Q9BRT7 94 aa6.78□□□□□ -1.32
HERC1-206ENST00000559996 NDFIP1Q9BT67 221 aa6.78□□□□□ -1.32
HERC1-206ENST00000559996 RNASE7Q9H1E1 156 aaKnown RBP6.78□□□□□ -1.32
HERC1-206ENST00000559996 TP53TG3Q9ULZ0 132 aa6.78□□□□□ -1.32
HERC1-206ENST00000559996 X6R8D5 127 aa6.78□□□□□ -1.32
HERC1-206ENST00000559996 TRAV21A0A0B4J279 112 aa6.77□□□□□ -1.33
HERC1-206ENST00000559996 PLAC8L1A1L4L8 177 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms