RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SUMO1P63165 101 aaKnown RBP8.16□□□□□ -1.1
SLIRP-205ENST00000556310 ZNF345Q14585 488 aa8.16□□□□□ -1.1
SLIRP-205ENST00000556310 ZNF680Q8NEM1 530 aa8.16□□□□□ -1.1
SLIRP-205ENST00000556310 SUN5Q8TC36 379 aa8.16□□□□□ -1.1
SLIRP-205ENST00000556310 TMED6Q8WW62 240 aa8.16□□□□□ -1.1
SLIRP-205ENST00000556310 HYLS1Q96M11 299 aa8.16□□□□□ -1.1
SLIRP-205ENST00000556310 ACTR3CQ9C0K3 210 aaPredicted RBP8.16□□□□□ -1.1
SLIRP-205ENST00000556310 NOP10Q9NPE3 64 aaKnown RBP8.16□□□□□ -1.1
SLIRP-205ENST00000556310 LENEPQ9Y5L5 61 aa8.16□□□□□ -1.1
SLIRP-205ENST00000556310 PGPA6NDG6 321 aa8.15□□□□□ -1.1
SLIRP-205ENST00000556310 CXorf1O96002 111 aa8.15□□□□□ -1.1
SLIRP-205ENST00000556310 GCHFRP30047 84 aa8.15□□□□□ -1.1
SLIRP-205ENST00000556310 RNASE4P34096 147 aaKnown RBP8.15□□□□□ -1.1
SLIRP-205ENST00000556310 ANXA2RQ3ZCQ2 193 aa8.15□□□□□ -1.1
SLIRP-205ENST00000556310 EIF4E3Q8N5X7 224 aaKnown RBP8.15□□□□□ -1.1
SLIRP-205ENST00000556310 LINC00612Q8N6U2 182 aa8.15□□□□□ -1.1
SLIRP-205ENST00000556310 CYTL1Q9NRR1 136 aa8.15□□□□□ -1.1
SLIRP-205ENST00000556310 TMEM167BQ9NRX6 74 aa8.15□□□□□ -1.1
SLIRP-205ENST00000556310 RPH3ALQ9UNE2 315 aa8.15□□□□□ -1.1
SLIRP-205ENST00000556310 EPPK1P58107 5090 aaKnown RBP8.14□□□□□ -1.11
SLIRP-205ENST00000556310 DNAH10Q8IVF4 4471 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 CTXND1A0A1B0GTU2 59 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 CBY3A6NI87 242 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 HMSDA8MTL9 139 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 ATP5G1P05496 136 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 P0DMU3 169 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 FAM231AP0DMU4 169 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 FAM231CP0DMU5 169 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 ATP5G3P48201 142 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 DAZ2Q13117 558 aaKnown RBP8.14□□□□□ -1.11
SLIRP-205ENST00000556310 AKR1C8PQ5T2L2 129 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 TMEM88Q6PEY1 159 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 GOLT1AQ6ZVE7 132 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 SSX7Q7RTT5 188 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 KCNRGQ8N5I3 272 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 C5orf17Q8NAS9 161 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 C11orf72Q8NBR9 251 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 ST6GAL2Q96JF0 529 aa8.14□□□□□ -1.11
SLIRP-205ENST00000556310 SERTM2A0A1B0GWG4 89 aa8.13□□□□□ -1.11
SLIRP-205ENST00000556310 GNG5P63218 68 aa8.13□□□□□ -1.11
SLIRP-205ENST00000556310 ZNF726P1Q15940 193 aa8.13□□□□□ -1.11
SLIRP-205ENST00000556310 IBA57Q5T440 356 aaKnown RBP8.13□□□□□ -1.11
SLIRP-205ENST00000556310 C15orf53Q8NAA6 179 aa8.13□□□□□ -1.11
SLIRP-205ENST00000556310 OR11H4Q8NGC9 324 aa8.13□□□□□ -1.11
SLIRP-205ENST00000556310 ARPC5LQ9BPX5 153 aa8.13□□□□□ -1.11
SLIRP-205ENST00000556310 IGHV1OR15-1A0A075B7D0 117 aa8.12□□□□□ -1.11
SLIRP-205ENST00000556310 GGTLC3B5MD39 225 aa8.12□□□□□ -1.11
SLIRP-205ENST00000556310 F5H768 121 aa8.12□□□□□ -1.11
SLIRP-205ENST00000556310 TCL1AP56279 114 aa8.12□□□□□ -1.11
SLIRP-205ENST00000556310 Q6AWC8 147 aa8.12□□□□□ -1.11
SLIRP-205ENST00000556310 IQCF2Q8IXL9 164 aa8.12□□□□□ -1.11
SLIRP-205ENST00000556310 GSN-AS1Q9NRJ2 163 aa8.12□□□□□ -1.11
SLIRP-205ENST00000556310 TRAV8-1A0A0A6YYK1 113 aa8.11□□□□□ -1.11
SLIRP-205ENST00000556310 A0A0D9SG52 128 aa8.11□□□□□ -1.11
SLIRP-205ENST00000556310 GAGE12BA1L429 117 aa8.11□□□□□ -1.11
SLIRP-205ENST00000556310 BCL2L11O43521 198 aa8.11□□□□□ -1.11
SLIRP-205ENST00000556310 GAGE7O76087 117 aa8.11□□□□□ -1.11
SLIRP-205ENST00000556310 TCRAP04437 139 aa8.11□□□□□ -1.11
SLIRP-205ENST00000556310 GAGE12FP0CL80 117 aa8.11□□□□□ -1.11
SLIRP-205ENST00000556310 GAGE12GP0CL81 117 aa8.11□□□□□ -1.11
SLIRP-205ENST00000556310 GAGE12IP0CL82 117 aa8.11□□□□□ -1.11
SLIRP-205ENST00000556310 Q6ZQT7 251 aa8.11□□□□□ -1.11
SLIRP-205ENST00000556310 Q6ZTI0 123 aa8.11□□□□□ -1.11
SLIRP-205ENST00000556310 POM121L12Q8N7R1 296 aa8.11□□□□□ -1.11
SLIRP-205ENST00000556310 FRAS1Q86XX4 4008 aa8.1□□□□□ -1.11
SLIRP-205ENST00000556310 KANTRA0A1W2PQU2 76 aa8.1□□□□□ -1.11
SLIRP-205ENST00000556310 A0A1W2PRE2 83 aa8.1□□□□□ -1.11
SLIRP-205ENST00000556310 MAP1LC3B2A6NCE7 125 aa8.1□□□□□ -1.11
SLIRP-205ENST00000556310 K7EQM0 130 aa8.1□□□□□ -1.11
SLIRP-205ENST00000556310 ZNF415Q09FC8 603 aa8.1□□□□□ -1.11
SLIRP-205ENST00000556310 CYB561D1Q8N8Q1 229 aa8.1□□□□□ -1.11
SLIRP-205ENST00000556310 C18orf15Q96N68 181 aa8.1□□□□□ -1.11
SLIRP-205ENST00000556310 NDFIP1Q9BT67 221 aa8.1□□□□□ -1.11
SLIRP-205ENST00000556310 MAP1LC3BQ9GZQ8 125 aa8.1□□□□□ -1.11
SLIRP-205ENST00000556310 TP53TG3Q9ULZ0 132 aa8.1□□□□□ -1.11
SLIRP-205ENST00000556310 NACAE9PAV3 2078 aa8.1□□□□□ -1.11
SLIRP-205ENST00000556310 MUC4Q99102 2169 aa8.1□□□□□ -1.11
SLIRP-205ENST00000556310 TRGV1A0A0A0MS02 117 aa8.09□□□□□ -1.11
SLIRP-205ENST00000556310 F6UZH7 168 aa8.09□□□□□ -1.11
SLIRP-205ENST00000556310 SPINK4O60575 86 aa8.09□□□□□ -1.11
SLIRP-205ENST00000556310 SEC11BP0C7V7 166 aa8.09□□□□□ -1.11
SLIRP-205ENST00000556310 FGF8P55075 233 aaPredicted RBP8.09□□□□□ -1.11
SLIRP-205ENST00000556310 MUC21Q5SSG8 566 aa8.09□□□□□ -1.11
SLIRP-205ENST00000556310 UBE2DNLQ8IWF7 75 aa8.09□□□□□ -1.11
SLIRP-205ENST00000556310 TMEM75Q8N9X5 138 aa8.09□□□□□ -1.11
SLIRP-205ENST00000556310 TVP23CQ96ET8 276 aa8.09□□□□□ -1.11
SLIRP-205ENST00000556310 ATG101Q9BSB4 218 aa8.09□□□□□ -1.11
SLIRP-205ENST00000556310 ZNF471Q9BX82 626 aaPredicted RBP8.09□□□□□ -1.11
SLIRP-205ENST00000556310 TMPRSS5Q9H3S3 457 aa8.09□□□□□ -1.11
SLIRP-205ENST00000556310 TREM1Q9NP99 234 aa8.09□□□□□ -1.11
SLIRP-205ENST00000556310 EPDR1Q9UM22 224 aa8.09□□□□□ -1.11
SLIRP-205ENST00000556310 KLF12Q9Y4X4 402 aa8.09□□□□□ -1.11
SLIRP-205ENST00000556310 TRGV11A0A075B6L2 103 aa8.08□□□□□ -1.12
SLIRP-205ENST00000556310 TRGV2A0A075B6R0 118 aa8.08□□□□□ -1.12
SLIRP-205ENST00000556310 TRAV21A0A0B4J279 112 aa8.08□□□□□ -1.12
SLIRP-205ENST00000556310 FBLL1A6NHQ2 334 aaKnown RBP8.08□□□□□ -1.12
SLIRP-205ENST00000556310 UMAD1C9J7I0 102 aa8.08□□□□□ -1.12
SLIRP-205ENST00000556310 IGLV2-11P01706 119 aa8.08□□□□□ -1.12
SLIRP-205ENST00000556310 EIF5AP63241 154 aaKnown RBP8.08□□□□□ -1.12
SLIRP-205ENST00000556310 LGALS9BQ3B8N2 356 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms