RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 A0A0A6YYD4 124 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 ARMS2P0C7Q2 107 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 HIST1H2BLQ99880 126 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 IGKV4-1P06312 121 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 OR11H6Q8NGC7 330 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 ZNRD1Q9P1U0 126 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 IGLL5B9A064 214 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 IGHV1-69DA0A0B4J2H0 117 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 IGHV1-69P01742 117 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 IGHV4OR15-8A0A075B7B6 117 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 A0A087WW49 117 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 GYPEP15421 78 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 A0A1B0GTI1 187 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 C15orf53Q8NAA6 179 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 CAMK2N2Q96S95 79 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 LMO1P25800 156 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 ATG2AQ2TAZ0 1938 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 H0Y9J4 135 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 NCR3O14931 201 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 C8orf86Q6ZUL3 223 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 CTHRC1Q96CG8 243 aa5.55□□□□□ -1.52
SYNE2-216ENST00000555002 TRAV4A0A0B4J268 109 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 FGF6P10767 208 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 HGFACQ04756 655 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 ZNF134P52741 427 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 SPANXCQ9NY87 97 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 CXCL1P09341 107 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 E7EQL1 145 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 HIST3H2BBQ8N257 126 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 RFNGQ9Y644 331 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.54□□□□□ -1.52
SYNE2-216ENST00000555002 IGKV2-29A2NJV5 120 aaPredicted RBP5.54□□□□□ -1.52
SYNE2-216ENST00000555002 TEX36Q5VZQ5 186 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 FAM104BQ5XKR9 115 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 HS3ST6Q96QI5 342 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 ORMDL1Q9P0S3 153 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 SEM1Q6ZVN7 128 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 RNF138Q8WVD3 245 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 FANCD2OSQ96PS1 177 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 MRPS18CQ9Y3D5 142 aaKnown RBP5.54□□□□□ -1.52
SYNE2-216ENST00000555002 A0A1B0GUS0 222 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 C5orf24Q7Z6I8 188 aa5.54□□□□□ -1.52
SYNE2-216ENST00000555002 TEX22C9J3V5 150 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 PROP1O75360 226 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 CCL18P55774 89 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 IGHV2-70DA0A0C4DH43 119 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 LINC00479Q96M42 142 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 MESP1Q9BRJ9 268 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 FAM231BA6NCW3 169 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 CD59P13987 128 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 CDKN1BP46527 198 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 LINC00205P59089 165 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 ANKHD1Q8IWZ3 2542 aaKnown RBP5.53□□□□□ -1.52
SYNE2-216ENST00000555002 IGKV1-9A0A0C4DH69 117 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 CD200R1LQ6Q8B3 271 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 FBLIM1Q8WUP2 373 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 ICOSQ9Y6W8 199 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 DENND4CQ5VZ89 1909 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 SDHAF1A6NFY7 115 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-216ENST00000555002 NTF4P34130 210 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 ANKRD29Q8N6D5 301 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 NDUFB8O95169 186 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 ESM1Q9NQ30 184 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 A0A1B0GX51 115 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 SRRM5B3KS81 715 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 HERVK_113P63121 156 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 TM2D2Q9BX73 214 aa5.53□□□□□ -1.52
SYNE2-216ENST00000555002 RNF5Q99942 180 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 RNF126Q9BV68 326 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 TSSC4Q9Y5U2 329 aaPredicted RBP5.52□□□□□ -1.53
SYNE2-216ENST00000555002 C3orf79P0CE67 100 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 CASC2Q6XLA1 102 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 WIPF2Q8TF74 440 aaPredicted RBP5.52□□□□□ -1.53
SYNE2-216ENST00000555002 RNF222A6NCQ9 220 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 DEFB4AO15263 64 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 IFI6P09912 130 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 PFN1P07737 140 aaKnown RBP5.52□□□□□ -1.53
SYNE2-216ENST00000555002 C2orf66Q6UXQ4 117 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 WDR83OSQ9Y284 106 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 COL5A3P25940 1745 aaPredicted RBP5.52□□□□□ -1.53
SYNE2-216ENST00000555002 GATA3P23771 443 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 MRPL51Q4U2R6 128 aaKnown RBP5.52□□□□□ -1.53
SYNE2-216ENST00000555002 VSIG2Q96IQ7 327 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 PLXNA2O75051 1894 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 IGKV1-27A0A075B6S5 117 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 LINC00473A8K010 186 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 CRYBA4P53673 196 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 TMEM75Q8N9X5 138 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 TMEM190Q8WZ59 177 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 IGKV3D-7A0A0C4DH55 119 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 BAALC-AS2P0C853 105 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 LINC01551Q86U37 167 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 GGNQ86UU5 652 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 Q8N8P6 123 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 SPTSSBQ8NFR3 76 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 FBLN5Q9UBX5 448 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 ARTNQ5T4W7 220 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 U3KQE9 123 aa5.52□□□□□ -1.53
SYNE2-216ENST00000555002 WISP3O95389 354 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms