RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 TCL1AP56279 114 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 RRAS2P62070 204 aaPredicted RBP2.02□□□□□ -2.09
SLIRP-202ENST00000553981 POLR2GP62487 172 aaKnown RBP eCLIP2.02□□□□□ -2.09
SLIRP-202ENST00000553981 SLC38A11Q08AI6 406 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 SMCO1Q147U7 214 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 OPCMLQ14982 345 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 SPCS2Q15005 226 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 KIAA1644Q3SXP7 199 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 ETFRF1Q6IPR1 90 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 DPPA3Q6W0C5 159 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 ZNF493Q6ZR52 646 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 BPIFCQ8NFQ6 507 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 ZFAND1Q8TCF1 268 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 DEFB104AQ8WTQ1 72 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 PPP1R14BQ96C90 147 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 SLC35E1Q96K37 410 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 SOSTQ9BQB4 213 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 ARV1Q9H2C2 271 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 C11orf1Q9H5F2 150 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 SHPKQ9UHJ6 478 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 FUT9Q9Y231 359 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.01□□□□□ -2.09
SLIRP-202ENST00000553981 IGKV2-40A0A087WW87 121 aaPredicted RBP2.01□□□□□ -2.09
SLIRP-202ENST00000553981 IGHV3-16A0A0C4DH30 117 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 ANKRD20A5PA0PJZ0 165 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 IBA57-AS1B1ANH7 110 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 FAM25AB3EWG3 89 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 FAM25CB3EWG5 89 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 FAM25GB3EWG6 89 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 GABARAPH6UMI1 98 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 EIF3GO75821 320 aaKnown RBP eCLIP2.01□□□□□ -2.09
SLIRP-202ENST00000553981 GABARAPO95166 117 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 ATP6V1G2O95670 118 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 OXTP01178 125 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 IGKV2D-40P01614 121 aaPredicted RBP2.01□□□□□ -2.09
SLIRP-202ENST00000553981 IGLV2-8P01709 118 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 IGHV3-30P01768 117 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 IGHV3-33P01772 117 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 CRYGDP07320 174 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 IGHV3-30-3P0DP02 117 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 IGHV3-30-5P0DP03 117 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 ZNF182P17025 639 aaPredicted RBP2.01□□□□□ -2.09
SLIRP-202ENST00000553981 AKR1C4P17516 323 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 MEOX2P50222 304 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 TAS2R19P59542 299 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 B2MP61769 119 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 GCSAMLQ5JQS6 135 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 SPANXN5Q5MJ07 72 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 FFAR4Q5NUL3 377 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 ADAMTSL4-AS1Q5T5F5 129 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 TMEM14EPQ6UXP3 125 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 CCDC190Q86UF4 302 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 TMEM256Q8N2U0 113 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 EXOC3-AS1Q8N2X6 119 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 CCDC71LQ8N9Z2 235 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 OR10J6PQ8NGY7 276 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 OR1S1Q8NH92 325 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 RNASE11Q8TAA1 199 aaKnown RBP2.01□□□□□ -2.09
SLIRP-202ENST00000553981 TVP23CQ96ET8 276 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 MGST2Q99735 147 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 C20orf144Q9BQM9 153 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 MRPL32Q9BYC8 188 aaKnown RBP2.01□□□□□ -2.09
SLIRP-202ENST00000553981 VCXQ9H320 206 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 Q9HAA7 133 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 PRR34Q9NV39 138 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 BLOC1S6Q9UL45 172 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 PAIP2BQ9ULR5 123 aaKnown RBP2.01□□□□□ -2.09
SLIRP-202ENST00000553981 HHLA3Q9XRX5 114 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 HIGD1AQ9Y241 93 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 ICOSQ9Y6W8 199 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 LY96Q9Y6Y9 160 aa2.01□□□□□ -2.09
SLIRP-202ENST00000553981 C7orf71A4D174 169 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 SNURFLB1AK76 121 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 CTDSPLO15194 276 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 GNRH2O43555 120 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 SYNGR2O43760 224 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 SFT2D2O95562 160 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 C1QBP02746 253 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 IL5P05113 134 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 HOXB5P09067 269 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 OR5G3P0C626 314 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 OR4E1P0C645 316 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 METTL15P1P0C7V9 234 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 LINC00694P0DN24 101 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 PYYP10082 97 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 CRISP2P16562 243 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 RPL7P18124 248 aaKnown RBP2□□□□□ -2.09
SLIRP-202ENST00000553981 RNASE4P34096 147 aaKnown RBP2□□□□□ -2.09
SLIRP-202ENST00000553981 UBE2MP61081 183 aaKnown RBP2□□□□□ -2.09
SLIRP-202ENST00000553981 ZNF415Q09FC8 603 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 PPP1R1AQ13522 171 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 SURF2Q15527 256 aaPredicted RBP2□□□□□ -2.09
SLIRP-202ENST00000553981 MUC21Q5SSG8 566 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 MIC13Q5XKP0 118 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 NEGR1Q7Z3B1 354 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 LINC00305Q7Z4B0 112 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 DAZ4Q86SG3 579 aaKnown RBP2□□□□□ -2.09
SLIRP-202ENST00000553981 CLVS1Q8IUQ0 354 aaPredicted RBP2□□□□□ -2.09
SLIRP-202ENST00000553981 IQCF2Q8IXL9 164 aa2□□□□□ -2.09
SLIRP-202ENST00000553981 EIF4E3Q8N5X7 224 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms