RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 RLN2P04090 185 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 CRYGDP07320 174 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 PSG1P11464 419 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 SLC25A6P12236 298 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 HTN1P15515 57 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 PVALBP20472 110 aaPredicted RBP3.43□□□□□ -1.86
CKAP4-203ENST00000553039 NUP62P37198 522 aaPredicted RBP3.43□□□□□ -1.86
CKAP4-203ENST00000553039 SNCAP37840 140 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 CDKN1BP46527 198 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 PSMB3P49720 205 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 AKR1C2P52895 323 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 PAX9P55771 341 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 SLAQ13239 276 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 Q5BKY6 102 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 PXDC1Q5TGL8 231 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 GDF5OSQ5U4N7 250 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 PRSS54Q6PEW0 395 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 LYZL2Q7Z4W2 148 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 ZNF546Q86UE3 836 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 SELENOHQ8IZQ5 122 aaKnown RBP3.43□□□□□ -1.86
CKAP4-203ENST00000553039 LHFPL5Q8TAF8 219 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 CIRBP-AS1Q8TBR5 109 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 PAXXQ9BUH6 204 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 NOP10Q9NPE3 64 aaKnown RBP3.43□□□□□ -1.86
CKAP4-203ENST00000553039 RPRMQ9NS64 109 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 CACNG5Q9UF02 275 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 PAIP2BQ9ULR5 123 aaKnown RBP3.43□□□□□ -1.86
CKAP4-203ENST00000553039 TNFSF18Q9UNG2 199 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 LRP2P98164 4655 aa3.43□□□□□ -1.86
CKAP4-203ENST00000553039 LRP1Q07954 4544 aaKnown RBP3.42□□□□□ -1.86
CKAP4-203ENST00000553039 KANTRA0A1W2PQU2 76 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 K7EPK0 472 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 CORTO00230 105 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 BCL2L11O43521 198 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 PRM2P04554 102 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 CXCL2P19875 107 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 AZU1P20160 251 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 S100A11P31949 105 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 LPAR6P43657 344 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 PRCDQ00LT1 54 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 IL15RAQ13261 267 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 EIF4EBP1Q13541 118 aaPredicted RBP3.42□□□□□ -1.86
CKAP4-203ENST00000553039 OR2F1Q13607 317 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 MRPL23Q16540 153 aaKnown RBP3.42□□□□□ -1.86
CKAP4-203ENST00000553039 LGALSLQ3ZCW2 172 aaPredicted RBP3.42□□□□□ -1.86
CKAP4-203ENST00000553039 NMSQ5H8A3 153 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 C6orf226Q5I0X4 101 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 LYPD5Q6UWN5 251 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 ACOT7LQ6ZUV0 252 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 KCNRGQ8N5I3 272 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 OR4C5Q8NGB2 326 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 OR4D5Q8NGN0 318 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 OR1S1Q8NH92 325 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 TMED6Q8WW62 240 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 AQP10Q96PS8 301 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 ARL6Q9H0F7 186 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 DOK5Q9P104 306 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 LSM5Q9Y4Y9 91 aaKnown RBP3.42□□□□□ -1.86
CKAP4-203ENST00000553039 ICOSQ9Y6W8 199 aa3.42□□□□□ -1.86
CKAP4-203ENST00000553039 A0A0J9YX75 114 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 RBFOX3A6NFN3 312 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 ISLRO14498 428 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 BUB3O43684 328 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 SSSCA1O60232 199 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 KRASP01116 189 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 TSHBP01222 138 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 IFNA7P01567 189 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 G6PCP35575 357 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 IFITM2Q01629 132 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 FHL2Q14192 279 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 FFAR4Q5NUL3 377 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 ATRAIDQ6UW56 229 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 TMUB2Q71RG4 321 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 H2BFWTQ7Z2G1 175 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 NEGR1Q7Z3B1 354 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 OR4X1Q8NH49 305 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 OR52E5Q8NH55 327 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 LINC00467Q9BRT7 94 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 OR5AC2Q9NZP5 309 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 CACFD1Q9UGQ2 172 aa3.41□□□□□ -1.86
CKAP4-203ENST00000553039 RCL1Q9Y2P8 373 aaKnown RBP3.41□□□□□ -1.86
CKAP4-203ENST00000553039 A0A0G2JRQ6 117 aa3.4□□□□□ -1.87
CKAP4-203ENST00000553039 PLAC8L1A1L4L8 177 aa3.4□□□□□ -1.87
CKAP4-203ENST00000553039 C9JCJ5 164 aa3.4□□□□□ -1.87
CKAP4-203ENST00000553039 TAAR5O14804 337 aa3.4□□□□□ -1.87
CKAP4-203ENST00000553039 SYNGR2O43760 224 aa3.4□□□□□ -1.87
CKAP4-203ENST00000553039 PITX3O75364 302 aa3.4□□□□□ -1.87
CKAP4-203ENST00000553039 ZNF324O75467 553 aaPredicted RBP3.4□□□□□ -1.87
CKAP4-203ENST00000553039 MED6O75586 246 aa3.4□□□□□ -1.87
CKAP4-203ENST00000553039 IGKV1-39P01597 117 aa3.4□□□□□ -1.87
CKAP4-203ENST00000553039 IGKV1-5P01602 117 aa3.4□□□□□ -1.87
CKAP4-203ENST00000553039 IGKV1D-39P04432 117 aa3.4□□□□□ -1.87
CKAP4-203ENST00000553039 S100A9P06702 114 aaKnown RBP3.4□□□□□ -1.87
CKAP4-203ENST00000553039 TPT1P13693 172 aaKnown RBP3.4□□□□□ -1.87
CKAP4-203ENST00000553039 RPL12P30050 165 aaKnown RBP3.4□□□□□ -1.87
CKAP4-203ENST00000553039 CAV2P51636 162 aa3.4□□□□□ -1.87
CKAP4-203ENST00000553039 RAB14P61106 215 aa3.4□□□□□ -1.87
CKAP4-203ENST00000553039 YPEL3P61236 119 aaPredicted RBP3.4□□□□□ -1.87
CKAP4-203ENST00000553039 HSPE1P61604 102 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 234.9 ms