RNA–Protein interactions for RNA: ENST00000552931.1

SMARCC2-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, human

TSL 3

Gene SMARCC2, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCC2-215	ENST00000552931	SEC22C	Q9BRL7	303 aa		4.25	□□□□□ -1.73
SMARCC2-215	ENST00000552931	NPCDR1	Q9BY65	106 aa		4.25	□□□□□ -1.73
SMARCC2-215	ENST00000552931	MRPL32	Q9BYC8	188 aa	Known RBP	4.25	□□□□□ -1.73
SMARCC2-215	ENST00000552931	SLC25A31	Q9H0C2	315 aa		4.25	□□□□□ -1.73
SMARCC2-215	ENST00000552931	TREM1	Q9NP99	234 aa		4.25	□□□□□ -1.73
SMARCC2-215	ENST00000552931	KCNIP2	Q9NS61	270 aa		4.25	□□□□□ -1.73
SMARCC2-215	ENST00000552931	NACA	E9PAV3	2078 aa		4.25	□□□□□ -1.73
SMARCC2-215	ENST00000552931	LRP1B	Q9NZR2	4599 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	TRAV6	A0A075B6T7	132 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	KRTAP23-1	A1A580	65 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	IGSF23	A1L1A6	192 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931		K7EP13	123 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	CST7	O76096	145 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	RLN2	P04090	185 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	CT45A10	P0DMU9	189 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	AZU1	P20160	251 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	CAV2	P51636	162 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	IFITM3	Q01628	133 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	MIC13	Q5XKP0	118 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	BAP18	Q8IXM2	172 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	ZNF680	Q8NEM1	530 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	OR11H4	Q8NGC9	324 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	ZNRF2	Q8NHG8	242 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	ASB13	Q8WXK3	278 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	LINC01587	Q99440	93 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	TMEM208	Q9BTX3	173 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	ZNF586	Q9NXT0	402 aa		4.24	□□□□□ -1.73
SMARCC2-215	ENST00000552931	MUC4	Q99102	2169 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	SLC17A3	O00476	420 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	CCS	O14618	274 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	IGKV3-20	P01619	116 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	NBEAP1	P0C6P0	100 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	PET100	P0DJ07	73 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	LEP	P41159	167 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	FXYD7	P58549	80 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	CTAG1A	P78358	180 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	HIST1H1A	Q02539	215 aa	Predicted RBP	4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	SLA	Q13239	276 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	TDRG1	Q3Y452	100 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	LINC01620	Q4KN68	170 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	SOHLH1	Q5JUK2	328 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	PAPPA-AS1	Q5QFB9	102 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	GFI1B	Q5VTD9	330 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	IGFL4	Q6B9Z1	124 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	RNASEK	Q6P5S7	137 aa	Known RBP	4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931		Q6ZNX1	250 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	C11orf72	Q8NBR9	251 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	LRRC20	Q8TCA0	184 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	RXFP4	Q8TDU9	374 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	SGK494	Q96LW2	274 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	WDR61	Q9GZS3	305 aa	Known RBP	4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	BATF3	Q9NR55	127 aa		4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	LSM5	Q9Y4Y9	91 aa	Known RBP	4.23	□□□□□ -1.73
SMARCC2-215	ENST00000552931	TRAV12-2	A0A075B6T6	113 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	IGHV3OR16-12	A0A075B7B8	117 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	PRAC2	D3DTV9	90 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	INMT-MINDY4	F8WBC2	141 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	MB	P02144	154 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	CCL18	P55774	89 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	TCL1A	P56279	114 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	H2BFS	P57053	126 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	RHOB	P62745	196 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931		Q6AWC8	147 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	ZFAND2A	Q8N6M9	145 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	OR5C1	Q8NGR4	320 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	THAP6	Q8TBB0	222 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	PPP1R1C	Q8WVI7	109 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	FXYD5	Q96DB9	178 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	SLC25A2	Q9BXI2	301 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	AGPAT4-IT1	Q9H0P7	198 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	ZNF492	Q9P255	531 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	PAM16	Q9Y3D7	125 aa		4.22	□□□□□ -1.73
SMARCC2-215	ENST00000552931	HSPG2	P98160	4391 aa		4.21	□□□□□ -1.73
SMARCC2-215	ENST00000552931	TRAV5	A0A0B4J249	113 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	NBDY	A0A0U1RRE5	68 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	UBE2L5P	A0A1B0GUS4	154 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	C7orf71	A4D174	169 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	C17orf112	F2Z3M2	114 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	TEX46	H3BTG2	121 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	SPINK4	O60575	86 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	MPC2	O95563	127 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	M6PR	P20645	277 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	FGF7	P21781	194 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	EMP1	P54849	157 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	DEFA1	P59665	94 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	DEFA3	P59666	94 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	SEC61B	P60468	96 aa	Known RBP	4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	ZNF266	Q14584	549 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	C1orf134	Q5TEV5	83 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	ZNF767P	Q75MW2	155 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	EIF4E3	Q8N5X7	224 aa	Known RBP	4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	OR2G3	Q8NGZ4	309 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	ENKUR	Q8TC29	256 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	RASL10A	Q92737	203 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	ZNF479	Q96JC4	524 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	ATP5S	Q99766	215 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	OR51M1	Q9H341	326 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931		Q9H3A6	140 aa		4.21	□□□□□ -1.74
SMARCC2-215	ENST00000552931	NOP10	Q9NPE3	64 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms