RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 TSKUQ8WUA8 353 aa5.55□□□□□ -1.52
SMARCD1-210ENST00000551352 C4orf3Q8WVX3 66 aa5.55□□□□□ -1.52
SMARCD1-210ENST00000551352 FRZBQ92765 325 aa5.55□□□□□ -1.52
SMARCD1-210ENST00000551352 DAZAP1Q96EP5 407 aaKnown RBP5.55□□□□□ -1.52
SMARCD1-210ENST00000551352 C8orf49Q96NF6 230 aa5.55□□□□□ -1.52
SMARCD1-210ENST00000551352 NRN1Q9NPD7 142 aa5.55□□□□□ -1.52
SMARCD1-210ENST00000551352 IZUMO1RA6ND01 250 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 A8MWL6 223 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 HIST1H2BKO60814 126 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 S100A6P06703 90 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 HIST1H2BJP06899 126 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 TRGC1P0CF51 173 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 CT45A10P0DMU9 189 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 HIST1H2BOP23527 126 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 HIST1H2BBP33778 126 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 CRIP1P50238 77 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 SYNJ2BPP57105 145 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 HIST1H2BDP58876 126 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 HIST1H2BCP62807 126 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 RPL19P84098 196 aaKnown RBP5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 HIST2H2BEQ16778 126 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 SAMD13Q5VXD3 122 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 HIST1H2BHQ93079 126 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 C20orf173Q96LM9 149 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 NEU1Q99519 415 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 HIST1H2BNQ99877 126 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 HIST1H2BMQ99879 126 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 NDFIP1Q9BT67 221 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 GPR61Q9BZJ8 451 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 NAT8BQ9UHF3 227 aa5.54□□□□□ -1.52
SMARCD1-210ENST00000551352 FAM231BA6NCW3 169 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 C5orf52A6NGY3 159 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 C2orf70A6NJV1 201 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 HIGD1CA8MV81 97 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 LINC01619G3V211 115 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 SH2D1AO60880 128 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 FRMD6-AS1P0C7T7 363 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 CBLN1P23435 193 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 ZNF138P52744 262 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 SLURP1P55000 103 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 SNRPEP62304 92 aaKnown RBP5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 RPL11P62913 178 aaKnown RBP5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 FABP9Q0Z7S8 132 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 ERCC8Q13216 396 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 FHL3Q13643 280 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 KLF5Q13887 457 aaPredicted RBP5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 COX19Q49B96 90 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 FAM162BQ5T6X4 162 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 C9orf47Q6ZRZ4 202 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 ZNF738Q8NE65 137 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 NUP35Q8NFH5 326 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 OR2D3Q8NGH3 330 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 OR1N2Q8NGR9 330 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 DPF1Q92782 380 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 GFRA4Q9GZZ7 299 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 AGPAT4-IT1Q9H0P7 198 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 SAV1Q9H4B6 383 aaPredicted RBP5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 TRAPPC1Q9Y5R8 145 aa5.53□□□□□ -1.52
SMARCD1-210ENST00000551352 IGKV3-7A0A075B6H7 116 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 CCL24O00175 119 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 UBE2CO00762 179 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 OVOL1O14753 267 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 SPINK4O60575 86 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 MT-ND6P03923 174 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 NDUFA6P56556 154 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 SMUG1Q53HV7 270 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 TMEM78Q5T7P6 136 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 MRPL54Q6P161 138 aaKnown RBP5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 WDR73Q6P4I2 378 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 RASL11AQ6T310 242 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 ATP5L2Q7Z4Y8 100 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 OR11H1Q8NG94 326 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 DCANP1Q8TF63 244 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 GTSF1Q8WW33 167 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 GNB1LQ9BYB4 327 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 PPP1R14DQ9NXH3 145 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 SELENOKQ9Y6D0 94 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 U3KQK5 164 aa5.52□□□□□ -1.53
SMARCD1-210ENST00000551352 A0A1B0GXF2 115 aa5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 SNURFLB1AK76 121 aa5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 HLA-DQA1P01909 254 aa5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 GZMBP10144 247 aa5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 ID1P41134 155 aa5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 ZNF80P51504 273 aaPredicted RBP5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 ADAMTSL5Q6ZMM2 481 aa5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 TMEM136Q6ZRR5 245 aa5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 RBPMS2Q6ZRY4 209 aaKnown RBP5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 OR8A1Q8NGG7 326 aa5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 OR10J6PQ8NGY7 276 aa5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 LINC00477Q96M19 166 aa5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 MRPL18Q9H0U6 180 aaKnown RBP5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 MS4A6AQ9H2W1 248 aa5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 PEMTQ9UBM1 199 aa5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 LENEPQ9Y5L5 61 aa5.51□□□□□ -1.53
SMARCD1-210ENST00000551352 DNAH10Q8IVF4 4471 aa5.5□□□□□ -1.53
SMARCD1-210ENST00000551352 XKRY2A2RUG3 117 aa5.5□□□□□ -1.53
SMARCD1-210ENST00000551352 TMEM189A5PLL7 270 aa5.5□□□□□ -1.53
SMARCD1-210ENST00000551352 FABP5P3A8MUU1 101 aa5.5□□□□□ -1.53
SMARCD1-210ENST00000551352 K7EQG2 157 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms