RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 IGHV4-4A0A075B6R2 117 aa18.46■□□□□ 0.55
CPSF6-205ENST00000550075 TCRAP04437 139 aa18.46■□□□□ 0.55
CPSF6-205ENST00000550075 DEFB130BP0DP73 79 aa18.46■□□□□ 0.55
CPSF6-205ENST00000550075 DEFB130AP0DP74 79 aa18.46■□□□□ 0.55
CPSF6-205ENST00000550075 FGF8P55075 233 aaPredicted RBP18.46■□□□□ 0.55
CPSF6-205ENST00000550075 PRR9Q5T870 116 aa18.46■□□□□ 0.55
CPSF6-205ENST00000550075 NKX6-2Q9C056 277 aaPredicted RBP18.46■□□□□ 0.55
CPSF6-205ENST00000550075 NOP10Q9NPE3 64 aaKnown RBP18.46■□□□□ 0.55
CPSF6-205ENST00000550075 CBY3A6NI87 242 aa18.45■□□□□ 0.54
CPSF6-205ENST00000550075 HTN3P15516 51 aa18.45■□□□□ 0.54
CPSF6-205ENST00000550075 DPPA3Q6W0C5 159 aa18.45■□□□□ 0.54
CPSF6-205ENST00000550075 FAM210BQ96KR6 192 aa18.45■□□□□ 0.54
CPSF6-205ENST00000550075 SACSQ9NZJ4 4579 aa18.44■□□□□ 0.54
CPSF6-205ENST00000550075 FBLL1A6NHQ2 334 aaKnown RBP18.44■□□□□ 0.54
CPSF6-205ENST00000550075 LY6G6CO95867 125 aa18.44■□□□□ 0.54
CPSF6-205ENST00000550075 ANXA2RQ3ZCQ2 193 aa18.44■□□□□ 0.54
CPSF6-205ENST00000550075 EIF5AL1Q6IS14 154 aaKnown RBP18.44■□□□□ 0.54
CPSF6-205ENST00000550075 CYB561D1Q8N8Q1 229 aa18.44■□□□□ 0.54
CPSF6-205ENST00000550075 FAM213BQ8TBF2 198 aa18.44■□□□□ 0.54
CPSF6-205ENST00000550075 TMPRSS5Q9H3S3 457 aa18.44■□□□□ 0.54
CPSF6-205ENST00000550075 PLA2G2EQ9NZK7 142 aa18.44■□□□□ 0.54
CPSF6-205ENST00000550075 EPDR1Q9UM22 224 aa18.44■□□□□ 0.54
CPSF6-205ENST00000550075 IGHV1OR15-1A0A075B7D0 117 aa18.43■□□□□ 0.54
CPSF6-205ENST00000550075 UBE2G2P60604 165 aa18.43■□□□□ 0.54
CPSF6-205ENST00000550075 ATG101Q9BSB4 218 aa18.43■□□□□ 0.54
CPSF6-205ENST00000550075 NDUFAF3Q9BU61 184 aa18.43■□□□□ 0.54
CPSF6-205ENST00000550075 TRAV8-1A0A0A6YYK1 113 aa18.42■□□□□ 0.54
CPSF6-205ENST00000550075 IFNA7P01567 189 aa18.42■□□□□ 0.54
CPSF6-205ENST00000550075 Q6AWC8 147 aa18.42■□□□□ 0.54
CPSF6-205ENST00000550075 TREM1Q9NP99 234 aa18.42■□□□□ 0.54
CPSF6-205ENST00000550075 APLNQ9ULZ1 77 aa18.42■□□□□ 0.54
CPSF6-205ENST00000550075 DNAH1Q9P2D7 4330 aa18.41■□□□□ 0.54
CPSF6-205ENST00000550075 FHITP49789 147 aa18.41■□□□□ 0.54
CPSF6-205ENST00000550075 LGALSLQ3ZCW2 172 aaPredicted RBP18.41■□□□□ 0.54
CPSF6-205ENST00000550075 LGALS9CQ6DKI2 356 aa18.41■□□□□ 0.54
CPSF6-205ENST00000550075 ATP5G1P05496 136 aa18.4■□□□□ 0.54
CPSF6-205ENST00000550075 ATP5G3P48201 142 aa18.4■□□□□ 0.54
CPSF6-205ENST00000550075 PPT1P50897 306 aa18.4■□□□□ 0.54
CPSF6-205ENST00000550075 DAZ2Q13117 558 aaKnown RBP18.4■□□□□ 0.54
CPSF6-205ENST00000550075 IBA57Q5T440 356 aaKnown RBP18.4■□□□□ 0.54
CPSF6-205ENST00000550075 TMEM75Q8N9X5 138 aa18.4■□□□□ 0.54
CPSF6-205ENST00000550075 SFT2D1Q8WV19 159 aa18.4■□□□□ 0.54
CPSF6-205ENST00000550075 ARL2-SNX15V9GYD0 113 aa18.4■□□□□ 0.54
CPSF6-205ENST00000550075 RYR3Q15413 4870 aa18.4■□□□□ 0.54
CPSF6-205ENST00000550075 FAM74A7A6NL05 159 aa18.39■□□□□ 0.53
CPSF6-205ENST00000550075 FLI1Q01543 452 aaPredicted RBP18.39■□□□□ 0.53
CPSF6-205ENST00000550075 MBD3L1Q8WWY6 194 aa18.39■□□□□ 0.53
CPSF6-205ENST00000550075 RYR2Q92736 4967 aa18.38■□□□□ 0.53
CPSF6-205ENST00000550075 TRAV21A0A0B4J279 112 aa18.38■□□□□ 0.53
CPSF6-205ENST00000550075 ZFP69Q49AA0 526 aa18.38■□□□□ 0.53
CPSF6-205ENST00000550075 FAM159AQ6UWV7 190 aa18.38■□□□□ 0.53
CPSF6-205ENST00000550075 HIST1H2BAQ96A08 127 aa18.38■□□□□ 0.53
CPSF6-205ENST00000550075 TCEAL7Q9BRU2 100 aa18.38■□□□□ 0.53
CPSF6-205ENST00000550075 GSN-AS1Q9NRJ2 163 aa18.38■□□□□ 0.53
CPSF6-205ENST00000550075 PSG8Q9UQ74 426 aa18.38■□□□□ 0.53
CPSF6-205ENST00000550075 F6UZH7 168 aa18.37■□□□□ 0.53
CPSF6-205ENST00000550075 RAB5CP51148 216 aa18.37■□□□□ 0.53
CPSF6-205ENST00000550075 TCL1AP56279 114 aa18.37■□□□□ 0.53
CPSF6-205ENST00000550075 ZNF415Q09FC8 603 aa18.37■□□□□ 0.53
CPSF6-205ENST00000550075 SLC51BQ86UW2 128 aa18.37■□□□□ 0.53
CPSF6-205ENST00000550075 C11orf72Q8NBR9 251 aa18.37■□□□□ 0.53
CPSF6-205ENST00000550075 SGK494Q96LW2 274 aa18.37■□□□□ 0.53
CPSF6-205ENST00000550075 PEX7O00628 323 aa18.36■□□□□ 0.53
CPSF6-205ENST00000550075 H2AFB1P0C5Y9 115 aa18.36■□□□□ 0.53
CPSF6-205ENST00000550075 MUC21Q5SSG8 566 aa18.36■□□□□ 0.53
CPSF6-205ENST00000550075 LINC00612Q8N6U2 182 aa18.36■□□□□ 0.53
CPSF6-205ENST00000550075 TRGV11A0A075B6L2 103 aa18.35■□□□□ 0.53
CPSF6-205ENST00000550075 GAGE12BA1L429 117 aa18.35■□□□□ 0.53
CPSF6-205ENST00000550075 GAGE7O76087 117 aa18.35■□□□□ 0.53
CPSF6-205ENST00000550075 GAGE12FP0CL80 117 aa18.35■□□□□ 0.53
CPSF6-205ENST00000550075 GAGE12GP0CL81 117 aa18.35■□□□□ 0.53
CPSF6-205ENST00000550075 GAGE12IP0CL82 117 aa18.35■□□□□ 0.53
CPSF6-205ENST00000550075 SAPCD1Q5SSQ6 148 aa18.35■□□□□ 0.53
CPSF6-205ENST00000550075 CST9LP1Q5W188 147 aa18.35■□□□□ 0.53
CPSF6-205ENST00000550075 Q6ZQT7 251 aa18.35■□□□□ 0.53
CPSF6-205ENST00000550075 PRNTQ86SH4 94 aa18.35■□□□□ 0.53
CPSF6-205ENST00000550075 TVP23CQ96ET8 276 aa18.35■□□□□ 0.53
CPSF6-205ENST00000550075 NAGKQ9UJ70 344 aa18.35■□□□□ 0.53
CPSF6-205ENST00000550075 F5H768 121 aa18.34■□□□□ 0.53
CPSF6-205ENST00000550075 TP53TG3Q9ULZ0 132 aa18.34■□□□□ 0.53
CPSF6-205ENST00000550075 SMUG1Q53HV7 270 aa18.33■□□□□ 0.52
CPSF6-205ENST00000550075 TMEM88Q6PEY1 159 aa18.33■□□□□ 0.52
CPSF6-205ENST00000550075 C15orf53Q8NAA6 179 aa18.33■□□□□ 0.52
CPSF6-205ENST00000550075 TRGV1A0A0A0MS02 117 aa18.32■□□□□ 0.52
CPSF6-205ENST00000550075 A0A1B0GV50 99 aa18.32■□□□□ 0.52
CPSF6-205ENST00000550075 TEX46H3BTG2 121 aa18.32■□□□□ 0.52
CPSF6-205ENST00000550075 IGLV2-11P01706 119 aa18.32■□□□□ 0.52
CPSF6-205ENST00000550075 TDRG1Q3Y452 100 aa18.32■□□□□ 0.52
CPSF6-205ENST00000550075 Q6ZTI0 123 aa18.32■□□□□ 0.52
CPSF6-205ENST00000550075 KCNS1Q96KK3 526 aa18.32■□□□□ 0.52
CPSF6-205ENST00000550075 KLF12Q9Y4X4 402 aa18.32■□□□□ 0.52
CPSF6-205ENST00000550075 TRGV2A0A075B6R0 118 aa18.31■□□□□ 0.52
CPSF6-205ENST00000550075 P0DMU3 169 aa18.31■□□□□ 0.52
CPSF6-205ENST00000550075 FAM231AP0DMU4 169 aa18.31■□□□□ 0.52
CPSF6-205ENST00000550075 FAM231CP0DMU5 169 aa18.31■□□□□ 0.52
CPSF6-205ENST00000550075 TMEM183BQ1AE95 376 aa18.31■□□□□ 0.52
CPSF6-205ENST00000550075 TMEM183AQ8IXX5 376 aa18.31■□□□□ 0.52
CPSF6-205ENST00000550075 C9orf62Q8N4C0 152 aa18.31■□□□□ 0.52
CPSF6-205ENST00000550075 PAGE4O60829 102 aa18.3■□□□□ 0.52
CPSF6-205ENST00000550075 GCGP01275 180 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms