RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 MCRIP2Q9BUT9 160 aaKnown RBP14.14□□□□□ -0.15
PRPF40B-208ENST00000548436 MAP1LC3CQ9BXW4 147 aa14.14□□□□□ -0.15
PRPF40B-208ENST00000548436 HSPB8Q9UJY1 196 aa14.14□□□□□ -0.15
PRPF40B-208ENST00000548436 GPHB5Q86YW7 130 aa14.14□□□□□ -0.15
PRPF40B-208ENST00000548436 TMEM191AQ9H0A3 160 aa14.14□□□□□ -0.15
PRPF40B-208ENST00000548436 C20orf202A1L168 122 aa14.13□□□□□ -0.15
PRPF40B-208ENST00000548436 BATFQ16520 125 aa14.13□□□□□ -0.15
PRPF40B-208ENST00000548436 A0A096LNJ9 63 aa14.13□□□□□ -0.15
PRPF40B-208ENST00000548436 HNRNPA3P51991 378 aaKnown RBP14.13□□□□□ -0.15
PRPF40B-208ENST00000548436 HIST1H1AQ02539 215 aaPredicted RBP14.13□□□□□ -0.15
PRPF40B-208ENST00000548436 Q6ZQT7 251 aa14.13□□□□□ -0.15
PRPF40B-208ENST00000548436 OR4X2Q8NGF9 303 aa14.13□□□□□ -0.15
PRPF40B-208ENST00000548436 RNF185Q96GF1 192 aa14.13□□□□□ -0.15
PRPF40B-208ENST00000548436 H0Y8G0 127 aa14.12□□□□□ -0.15
PRPF40B-208ENST00000548436 NCR2O95944 276 aa14.12□□□□□ -0.15
PRPF40B-208ENST00000548436 IGLV1-40P01703 118 aa14.12□□□□□ -0.15
PRPF40B-208ENST00000548436 CKS2P33552 79 aa14.12□□□□□ -0.15
PRPF40B-208ENST00000548436 DSCR9P59020 149 aa14.12□□□□□ -0.15
PRPF40B-208ENST00000548436 PET117Q6UWS5 81 aa14.12□□□□□ -0.15
PRPF40B-208ENST00000548436 OR10AG1Q8NH19 301 aa14.12□□□□□ -0.15
PRPF40B-208ENST00000548436 ZNF747Q9BV97 191 aa14.12□□□□□ -0.15
PRPF40B-208ENST00000548436 NPYP01303 97 aa14.11□□□□□ -0.15
PRPF40B-208ENST00000548436 C9orf139Q6ZV77 190 aa14.11□□□□□ -0.15
PRPF40B-208ENST00000548436 PPP1R14DQ9NXH3 145 aa14.11□□□□□ -0.15
PRPF40B-208ENST00000548436 hDV102S1A0JD36 115 aa14.11□□□□□ -0.15
PRPF40B-208ENST00000548436 TCAPO15273 167 aa14.11□□□□□ -0.15
PRPF40B-208ENST00000548436 RPLP1P05386 114 aaKnown RBP14.11□□□□□ -0.15
PRPF40B-208ENST00000548436 TSPOP30536 169 aa14.11□□□□□ -0.15
PRPF40B-208ENST00000548436 FOXE3Q13461 319 aa14.11□□□□□ -0.15
PRPF40B-208ENST00000548436 SOCS3O14543 225 aa14.1□□□□□ -0.15
PRPF40B-208ENST00000548436 GATA3P23771 443 aa14.1□□□□□ -0.15
PRPF40B-208ENST00000548436 CFHR3Q02985 330 aa14.1□□□□□ -0.15
PRPF40B-208ENST00000548436 ZNF738Q8NE65 137 aa14.1□□□□□ -0.15
PRPF40B-208ENST00000548436 FBN2P35556 2912 aa14.1□□□□□ -0.15
PRPF40B-208ENST00000548436 ANKRD17O75179 2603 aaKnown RBP14.1□□□□□ -0.15
PRPF40B-208ENST00000548436 A0A096LNT2 108 aa14.1□□□□□ -0.15
PRPF40B-208ENST00000548436 GAS8-AS1O95177 125 aa14.1□□□□□ -0.15
PRPF40B-208ENST00000548436 SLC25A16P16260 332 aa14.1□□□□□ -0.15
PRPF40B-208ENST00000548436 TMEM95Q3KNT9 176 aa14.1□□□□□ -0.15
PRPF40B-208ENST00000548436 PRR9Q5T870 116 aa14.1□□□□□ -0.15
PRPF40B-208ENST00000548436 PRSS57Q6UWY2 283 aa14.1□□□□□ -0.15
PRPF40B-208ENST00000548436 NPFFR1Q9GZQ6 430 aa14.1□□□□□ -0.15
PRPF40B-208ENST00000548436 LINC01545Q5VT33 79 aa14.09□□□□□ -0.15
PRPF40B-208ENST00000548436 PMCHL2Q9BQD1 86 aa14.09□□□□□ -0.15
PRPF40B-208ENST00000548436 FXYD7P58549 80 aa14.08□□□□□ -0.15
PRPF40B-208ENST00000548436 DEFB112Q30KQ8 113 aa14.08□□□□□ -0.15
PRPF40B-208ENST00000548436 LINC01356Q8N9X3 169 aa14.08□□□□□ -0.15
PRPF40B-208ENST00000548436 LAMTOR2Q9Y2Q5 125 aa14.08□□□□□ -0.15
PRPF40B-208ENST00000548436 IGHV7-4-1A0A0J9YVY3 117 aa14.08□□□□□ -0.16
PRPF40B-208ENST00000548436 IGHV4-59P01825 116 aa14.08□□□□□ -0.16
PRPF40B-208ENST00000548436 DEFB1P60022 68 aa14.08□□□□□ -0.16
PRPF40B-208ENST00000548436 MAPK1IP1LQ8NDC0 245 aa14.08□□□□□ -0.16
PRPF40B-208ENST00000548436 TP73-AS1Q9UF72 201 aa14.08□□□□□ -0.16
PRPF40B-208ENST00000548436 A0A0G2JLM5 398 aa14.07□□□□□ -0.16
PRPF40B-208ENST00000548436 TM4SF20Q53R12 229 aa14.07□□□□□ -0.16
PRPF40B-208ENST00000548436 ST20Q9HBF5 79 aa14.07□□□□□ -0.16
PRPF40B-208ENST00000548436 MRPS16Q9Y3D3 137 aaKnown RBP14.07□□□□□ -0.16
PRPF40B-208ENST00000548436 SRSF1Q07955 248 aaKnown RBP eCLIP14.06□□□□□ -0.16
PRPF40B-208ENST00000548436 SELENOKQ9Y6D0 94 aa14.06□□□□□ -0.16
PRPF40B-208ENST00000548436 TCF21O43680 179 aa14.06□□□□□ -0.16
PRPF40B-208ENST00000548436 TFPI2P48307 235 aa14.05□□□□□ -0.16
PRPF40B-208ENST00000548436 RPL11P62913 178 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-208ENST00000548436 STPG4Q8N801 248 aa14.05□□□□□ -0.16
PRPF40B-208ENST00000548436 RHPN1-AS1Q9BWJ2 59 aa14.05□□□□□ -0.16
PRPF40B-208ENST00000548436 LENEPQ9Y5L5 61 aa14.05□□□□□ -0.16
PRPF40B-208ENST00000548436 IGKV3-7A0A075B6H7 116 aa14.05□□□□□ -0.16
PRPF40B-208ENST00000548436 J3KRW8 73 aa14.05□□□□□ -0.16
PRPF40B-208ENST00000548436 PPBPP02775 128 aa14.05□□□□□ -0.16
PRPF40B-208ENST00000548436 EDN2P20800 178 aa14.05□□□□□ -0.16
PRPF40B-208ENST00000548436 OR8A1Q8NGG7 326 aa14.05□□□□□ -0.16
PRPF40B-208ENST00000548436 LINC00477Q96M19 166 aa14.05□□□□□ -0.16
PRPF40B-208ENST00000548436 ZANQ9Y493 2812 aa14.04□□□□□ -0.16
PRPF40B-208ENST00000548436 COX6B1P14854 86 aa14.04□□□□□ -0.16
PRPF40B-208ENST00000548436 GATA1P15976 413 aaPredicted RBP14.04□□□□□ -0.16
PRPF40B-208ENST00000548436 EVI2AP22794 236 aa14.04□□□□□ -0.16
PRPF40B-208ENST00000548436 G0S2P27469 103 aa14.04□□□□□ -0.16
PRPF40B-208ENST00000548436 COL5A1-AS1Q5SY13 56 aa14.04□□□□□ -0.16
PRPF40B-208ENST00000548436 ZFAND2AQ8N6M9 145 aa14.04□□□□□ -0.16
PRPF40B-208ENST00000548436 USP9YO00507 2555 aaPredicted RBP14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 A1L4Q6 167 aa14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 OVOL1O14753 267 aa14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 TGFAP01135 160 aa14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 HBDP02042 147 aa14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 C10orf99Q6UWK7 81 aa14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 OR10J6PQ8NGY7 276 aa14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 DAZ1Q9NQZ3 744 aaKnown RBP14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 PEF1Q9UBV8 284 aaKnown RBP14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 POLQO75417 2590 aa14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 TNFRSF6BO95407 300 aa14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 PSMB8P28062 276 aa14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 MAP1LC3AQ9H492 121 aa14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 ZNF580Q9UK33 172 aa14.03□□□□□ -0.16
PRPF40B-208ENST00000548436 CR1P17927 2039 aa14.02□□□□□ -0.16
PRPF40B-208ENST00000548436 HSBP1L1C9JCN9 74 aa14.02□□□□□ -0.16
PRPF40B-208ENST00000548436 F6UB75 175 aa14.02□□□□□ -0.16
PRPF40B-208ENST00000548436 SNAI2O43623 268 aa14.02□□□□□ -0.16
PRPF40B-208ENST00000548436 ZNF25P17030 456 aaPredicted RBP14.02□□□□□ -0.16
PRPF40B-208ENST00000548436 HINT1P49773 126 aaPredicted RBP14.02□□□□□ -0.16
PRPF40B-208ENST00000548436 SCRT2Q9NQ03 307 aa14.02□□□□□ -0.17
PRPF40B-208ENST00000548436 SMPXQ9UHP9 88 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms