RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 MLST8Q9BVC4 326 aa12.46□□□□□ -0.41
CADM1-220ENST00000546000 XCL2Q9UBD3 114 aa12.46□□□□□ -0.41
CADM1-220ENST00000546000 LOC102724200A0A096LPH7 203 aaPredicted RBP12.45□□□□□ -0.42
CADM1-220ENST00000546000 KLLNB2CW77 178 aa12.45□□□□□ -0.42
CADM1-220ENST00000546000 CA1P00915 261 aaPredicted RBP12.45□□□□□ -0.42
CADM1-220ENST00000546000 GCGP01275 180 aa12.45□□□□□ -0.42
CADM1-220ENST00000546000 RNASE4P34096 147 aaKnown RBP12.45□□□□□ -0.42
CADM1-220ENST00000546000 TMEM183AQ8IXX5 376 aa12.45□□□□□ -0.42
CADM1-220ENST00000546000 CLUHP3Q96NS8 147 aa12.45□□□□□ -0.42
CADM1-220ENST00000546000 FBLL1A6NHQ2 334 aaKnown RBP12.44□□□□□ -0.42
CADM1-220ENST00000546000 FRMD6-AS1P0C7T7 363 aa12.44□□□□□ -0.42
CADM1-220ENST00000546000 CDKN1BP46527 198 aa12.44□□□□□ -0.42
CADM1-220ENST00000546000 CRIP1P50238 77 aa12.44□□□□□ -0.42
CADM1-220ENST00000546000 RPL23P62829 140 aaKnown RBP12.44□□□□□ -0.42
CADM1-220ENST00000546000 LINC01551Q86U37 167 aa12.44□□□□□ -0.42
CADM1-220ENST00000546000 NAT8Q9UHE5 227 aa12.44□□□□□ -0.42
CADM1-220ENST00000546000 ZFP30Q9Y2G7 519 aa12.44□□□□□ -0.42
CADM1-220ENST00000546000 TRAV12-3A0A0B4J271 114 aa12.43□□□□□ -0.42
CADM1-220ENST00000546000 C7orf71A4D174 169 aa12.43□□□□□ -0.42
CADM1-220ENST00000546000 GPX1P07203 203 aa12.43□□□□□ -0.42
CADM1-220ENST00000546000 ADIRFQ15847 76 aa12.43□□□□□ -0.42
CADM1-220ENST00000546000 FAM74A3Q4VXF1 159 aa12.43□□□□□ -0.42
CADM1-220ENST00000546000 SMUG1Q53HV7 270 aa12.43□□□□□ -0.42
CADM1-220ENST00000546000 SAPCD1Q5SSQ6 148 aa12.43□□□□□ -0.42
CADM1-220ENST00000546000 LENEPQ9Y5L5 61 aa12.43□□□□□ -0.42
CADM1-220ENST00000546000 SH2D1AO60880 128 aa12.42□□□□□ -0.42
CADM1-220ENST00000546000 TSPOP30536 169 aa12.42□□□□□ -0.42
CADM1-220ENST00000546000 TMEM241Q24JQ0 296 aa12.42□□□□□ -0.42
CADM1-220ENST00000546000 NIPSNAP3BQ9BS92 247 aa12.42□□□□□ -0.42
CADM1-220ENST00000546000 SEC11CQ9BY50 192 aa12.42□□□□□ -0.42
CADM1-220ENST00000546000 CSTL1Q9H114 145 aa12.42□□□□□ -0.42
CADM1-220ENST00000546000 SDF2L1Q9HCN8 221 aa12.42□□□□□ -0.42
CADM1-220ENST00000546000 C11orf21Q9P2W6 132 aa12.42□□□□□ -0.42
CADM1-220ENST00000546000 TRBV7-9A0A0J9YWB2 115 aa12.41□□□□□ -0.42
CADM1-220ENST00000546000 INSP01308 110 aa12.41□□□□□ -0.42
CADM1-220ENST00000546000 MORN3Q6PF18 240 aaPredicted RBP12.41□□□□□ -0.42
CADM1-220ENST00000546000 COX8CQ7Z4L0 72 aa12.41□□□□□ -0.42
CADM1-220ENST00000546000 NAGKQ9UJ70 344 aa12.41□□□□□ -0.42
CADM1-220ENST00000546000 A8MZ25 164 aa12.4□□□□□ -0.42
CADM1-220ENST00000546000 PRM2P04554 102 aa12.4□□□□□ -0.42
CADM1-220ENST00000546000 RPL19P84098 196 aaKnown RBP12.4□□□□□ -0.42
CADM1-220ENST00000546000 MUC21Q5SSG8 566 aa12.4□□□□□ -0.42
CADM1-220ENST00000546000 C10orf91Q5T1B1 145 aa12.4□□□□□ -0.42
CADM1-220ENST00000546000 C1orf158Q8N1D5 194 aa12.4□□□□□ -0.42
CADM1-220ENST00000546000 RNASE7Q9H1E1 156 aaKnown RBP12.4□□□□□ -0.42
CADM1-220ENST00000546000 RETNQ9HD89 108 aa12.4□□□□□ -0.42
CADM1-220ENST00000546000 CARHSP1Q9Y2V2 147 aaKnown RBP12.4□□□□□ -0.42
CADM1-220ENST00000546000 IGHV3OR16-12A0A075B7B8 117 aa12.39□□□□□ -0.43
CADM1-220ENST00000546000 DEFB135Q30KP9 77 aa12.39□□□□□ -0.43
CADM1-220ENST00000546000 DEFB121Q5J5C9 76 aa12.39□□□□□ -0.43
CADM1-220ENST00000546000 Q6AWC8 147 aa12.39□□□□□ -0.43
CADM1-220ENST00000546000 ISOC2Q96AB3 205 aa12.39□□□□□ -0.43
CADM1-220ENST00000546000 TMSB15BA0A087X1C1 80 aa12.38□□□□□ -0.43
CADM1-220ENST00000546000 M0R036 132 aa12.38□□□□□ -0.43
CADM1-220ENST00000546000 ATP6V1G1O75348 118 aa12.38□□□□□ -0.43
CADM1-220ENST00000546000 ZNF324O75467 553 aaPredicted RBP12.38□□□□□ -0.43
CADM1-220ENST00000546000 AMBPP02760 352 aa12.38□□□□□ -0.43
CADM1-220ENST00000546000 APOC4P55056 127 aa12.38□□□□□ -0.43
CADM1-220ENST00000546000 NUTF2P61970 127 aaKnown RBP12.38□□□□□ -0.43
CADM1-220ENST00000546000 FAM162BQ5T6X4 162 aa12.38□□□□□ -0.43
CADM1-220ENST00000546000 CSNK1G2-AS1Q8NCQ2 148 aa12.38□□□□□ -0.43
CADM1-220ENST00000546000 MRAPQ8TCY5 172 aa12.38□□□□□ -0.43
CADM1-220ENST00000546000 SMIM12Q96EX1 92 aa12.38□□□□□ -0.43
CADM1-220ENST00000546000 LY96Q9Y6Y9 160 aa12.38□□□□□ -0.43
CADM1-220ENST00000546000 TRAV21A0A0B4J279 112 aa12.37□□□□□ -0.43
CADM1-220ENST00000546000 KIR2DL5BA0A0G2JN68 375 aa12.37□□□□□ -0.43
CADM1-220ENST00000546000 KIR2DL5BA0A0G2JPC4 375 aa12.37□□□□□ -0.43
CADM1-220ENST00000546000 C19orf71A6NCJ1 209 aa12.37□□□□□ -0.43
CADM1-220ENST00000546000 APOC3P02656 99 aa12.37□□□□□ -0.43
CADM1-220ENST00000546000 PFN1P07737 140 aaKnown RBP12.37□□□□□ -0.43
CADM1-220ENST00000546000 KIR2DL5AQ8N109 375 aa12.37□□□□□ -0.43
CADM1-220ENST00000546000 KIR2DL5BQ8NHK3 375 aa12.37□□□□□ -0.43
CADM1-220ENST00000546000 KRBOX1C9JBD0 128 aa12.36□□□□□ -0.43
CADM1-220ENST00000546000 DEFA6Q01524 100 aa12.36□□□□□ -0.43
CADM1-220ENST00000546000 ANXA2RQ3ZCQ2 193 aa12.36□□□□□ -0.43
CADM1-220ENST00000546000 NUDT10Q8NFP7 164 aa12.36□□□□□ -0.43
CADM1-220ENST00000546000 NUDT11Q96G61 164 aa12.36□□□□□ -0.43
CADM1-220ENST00000546000 TP53TG3Q9ULZ0 132 aa12.36□□□□□ -0.43
CADM1-220ENST00000546000 IGKV3D-20A0A0C4DH25 116 aa12.35□□□□□ -0.43
CADM1-220ENST00000546000 SBSPONQ8IVN8 264 aa12.35□□□□□ -0.43
CADM1-220ENST00000546000 GRIFINA4D1Z8 144 aa12.34□□□□□ -0.43
CADM1-220ENST00000546000 FABP5P3A8MUU1 101 aa12.34□□□□□ -0.43
CADM1-220ENST00000546000 ZNF705GA8MUZ8 300 aaPredicted RBP12.34□□□□□ -0.43
CADM1-220ENST00000546000 ORM1P02763 201 aa12.34□□□□□ -0.43
CADM1-220ENST00000546000 GZMBP10144 247 aa12.34□□□□□ -0.43
CADM1-220ENST00000546000 HTN1P15515 57 aa12.34□□□□□ -0.43
CADM1-220ENST00000546000 ERVFC1-1P60608 527 aa12.34□□□□□ -0.43
CADM1-220ENST00000546000 IBA57Q5T440 356 aaKnown RBP12.34□□□□□ -0.43
CADM1-220ENST00000546000 SFRP2Q96HF1 295 aa12.34□□□□□ -0.43
CADM1-220ENST00000546000 LINC01587Q99440 93 aa12.34□□□□□ -0.43
CADM1-220ENST00000546000 TMEM208Q9BTX3 173 aa12.34□□□□□ -0.43
CADM1-220ENST00000546000 C1QTNF4Q9BXJ3 329 aa12.34□□□□□ -0.43
CADM1-220ENST00000546000 GOLT1BQ9Y3E0 138 aa12.34□□□□□ -0.43
CADM1-220ENST00000546000 IGHV1OR15-1A0A075B7D0 117 aa12.33□□□□□ -0.44
CADM1-220ENST00000546000 P01737 135 aa12.33□□□□□ -0.44
CADM1-220ENST00000546000 PNRC1Q12796 327 aaPredicted RBP12.33□□□□□ -0.44
CADM1-220ENST00000546000 RNF212Q495C1 297 aa12.33□□□□□ -0.44
CADM1-220ENST00000546000 ATRAIDQ6UW56 229 aa12.33□□□□□ -0.44
CADM1-220ENST00000546000 ZNF575Q86XF7 245 aa12.33□□□□□ -0.44
CADM1-220ENST00000546000 CLRN3Q8NCR9 226 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms