RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 TRAV34A0A0B4J273 112 aa12.3□□□□□ -0.44
RABGGTA-203ENST00000543002 C11orf94C9JXX5 98 aa12.3□□□□□ -0.44
RABGGTA-203ENST00000543002 PRM2P04554 102 aa12.3□□□□□ -0.44
RABGGTA-203ENST00000543002 PRNTQ86SH4 94 aa12.3□□□□□ -0.44
RABGGTA-203ENST00000543002 IL17DQ8TAD2 202 aa12.3□□□□□ -0.44
RABGGTA-203ENST00000543002 MUC7Q8TAX7 377 aa12.3□□□□□ -0.44
RABGGTA-203ENST00000543002 TXNDC17Q9BRA2 123 aa12.3□□□□□ -0.44
RABGGTA-203ENST00000543002 PYGO2Q9BRQ0 406 aa12.3□□□□□ -0.44
RABGGTA-203ENST00000543002 IFNA1P01562 189 aa12.29□□□□□ -0.44
RABGGTA-203ENST00000543002 AZU1P20160 251 aa12.29□□□□□ -0.44
RABGGTA-203ENST00000543002 Q6AWC8 147 aa12.29□□□□□ -0.44
RABGGTA-203ENST00000543002 TEX261Q6UWH6 196 aa12.29□□□□□ -0.44
RABGGTA-203ENST00000543002 LYPD6BQ8NI32 183 aa12.29□□□□□ -0.44
RABGGTA-203ENST00000543002 LINC00467Q9BRT7 94 aa12.29□□□□□ -0.44
RABGGTA-203ENST00000543002 KLF12Q9Y4X4 402 aa12.29□□□□□ -0.44
RABGGTA-203ENST00000543002 HTN1P15515 57 aa12.28□□□□□ -0.44
RABGGTA-203ENST00000543002 SAPCD1Q5SSQ6 148 aa12.28□□□□□ -0.44
RABGGTA-203ENST00000543002 Q6ZQT7 251 aa12.28□□□□□ -0.44
RABGGTA-203ENST00000543002 ZNF680Q8NEM1 530 aa12.28□□□□□ -0.44
RABGGTA-203ENST00000543002 C11orf45Q8TAV5 145 aa12.28□□□□□ -0.44
RABGGTA-203ENST00000543002 FMC1Q96HJ9 113 aa12.28□□□□□ -0.44
RABGGTA-203ENST00000543002 TRBV6-1A0A0K0K1D8 114 aa12.27□□□□□ -0.45
RABGGTA-203ENST00000543002 SCO2A0A1W2PP80 73 aa12.27□□□□□ -0.45
RABGGTA-203ENST00000543002 BCL2P10415 239 aa12.27□□□□□ -0.45
RABGGTA-203ENST00000543002 TAGLN2P37802 199 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-203ENST00000543002 AKR1C3P42330 323 aa12.27□□□□□ -0.45
RABGGTA-203ENST00000543002 EMP1P54849 157 aa12.27□□□□□ -0.45
RABGGTA-203ENST00000543002 TMEM183BQ1AE95 376 aa12.27□□□□□ -0.45
RABGGTA-203ENST00000543002 ZNF493Q6ZR52 646 aa12.27□□□□□ -0.45
RABGGTA-203ENST00000543002 Q86TA4 180 aa12.27□□□□□ -0.45
RABGGTA-203ENST00000543002 C2CD4CQ8TF44 421 aa12.27□□□□□ -0.45
RABGGTA-203ENST00000543002 TMEM263Q8WUH6 116 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-203ENST00000543002 C16orf74Q96GX8 76 aa12.27□□□□□ -0.45
RABGGTA-203ENST00000543002 C8orf49Q96NF6 230 aa12.27□□□□□ -0.45
RABGGTA-203ENST00000543002 PLAC8L1A1L4L8 177 aa12.26□□□□□ -0.45
RABGGTA-203ENST00000543002 CXorf65A6NEN9 183 aa12.26□□□□□ -0.45
RABGGTA-203ENST00000543002 S100A9P06702 114 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-203ENST00000543002 UBE2G1P62253 170 aa12.26□□□□□ -0.45
RABGGTA-203ENST00000543002 MEF2BQ02080 365 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-203ENST00000543002 RNASE8Q8TDE3 154 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-203ENST00000543002 VAX2Q9UIW0 290 aa12.26□□□□□ -0.45
RABGGTA-203ENST00000543002 CELA1Q9UNI1 258 aa12.26□□□□□ -0.45
RABGGTA-203ENST00000543002 IGHV1OR15-1A0A075B7D0 117 aa12.25□□□□□ -0.45
RABGGTA-203ENST00000543002 TRAV21A0A0B4J279 112 aa12.25□□□□□ -0.45
RABGGTA-203ENST00000543002 C3orf84H3BNL1 204 aa12.25□□□□□ -0.45
RABGGTA-203ENST00000543002 RGS13O14921 159 aa12.25□□□□□ -0.45
RABGGTA-203ENST00000543002 SPART-AS1P0CW21 52 aa12.25□□□□□ -0.45
RABGGTA-203ENST00000543002 ANXA2RQ3ZCQ2 193 aa12.25□□□□□ -0.45
RABGGTA-203ENST00000543002 SMUG1Q53HV7 270 aa12.25□□□□□ -0.45
RABGGTA-203ENST00000543002 EIF4E3Q8N5X7 224 aaKnown RBP12.25□□□□□ -0.45
RABGGTA-203ENST00000543002 C11orf52Q96A22 123 aa12.25□□□□□ -0.45
RABGGTA-203ENST00000543002 ZFP30Q9Y2G7 519 aa12.25□□□□□ -0.45
RABGGTA-203ENST00000543002 TEX48A0A1B0GUV7 120 aa12.24□□□□□ -0.45
RABGGTA-203ENST00000543002 PDE6DO43924 150 aa12.24□□□□□ -0.45
RABGGTA-203ENST00000543002 GCGP01275 180 aa12.24□□□□□ -0.45
RABGGTA-203ENST00000543002 NANOS2P60321 138 aaKnown RBP12.24□□□□□ -0.45
RABGGTA-203ENST00000543002 DKK2Q9UBU2 259 aa12.24□□□□□ -0.45
RABGGTA-203ENST00000543002 CBY3A6NI87 242 aa12.23□□□□□ -0.45
RABGGTA-203ENST00000543002 LTAP01374 205 aa12.23□□□□□ -0.45
RABGGTA-203ENST00000543002 ZNF80P51504 273 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-203ENST00000543002 FAM222AQ5U5X8 452 aa12.23□□□□□ -0.45
RABGGTA-203ENST00000543002 COX8CQ7Z4L0 72 aa12.23□□□□□ -0.45
RABGGTA-203ENST00000543002 LYRM9A8MSI8 78 aa12.22□□□□□ -0.45
RABGGTA-203ENST00000543002 MUC21Q5SSG8 566 aa12.22□□□□□ -0.45
RABGGTA-203ENST00000543002 FAM159AQ6UWV7 190 aa12.22□□□□□ -0.45
RABGGTA-203ENST00000543002 TIMM8BQ9Y5J9 83 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-203ENST00000543002 RBFOX3A6NFN3 312 aa12.21□□□□□ -0.45
RABGGTA-203ENST00000543002 PFN1P07737 140 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-203ENST00000543002 C12orf74Q32Q52 190 aa12.21□□□□□ -0.45
RABGGTA-203ENST00000543002 TDRG1Q3Y452 100 aa12.21□□□□□ -0.45
RABGGTA-203ENST00000543002 ZFAND6Q6FIF0 208 aa12.21□□□□□ -0.45
RABGGTA-203ENST00000543002 TMEM183AQ8IXX5 376 aa12.21□□□□□ -0.45
RABGGTA-203ENST00000543002 C11orf72Q8NBR9 251 aa12.21□□□□□ -0.45
RABGGTA-203ENST00000543002 TP53TG3Q9ULZ0 132 aa12.21□□□□□ -0.45
RABGGTA-203ENST00000543002 SNURFLB1AK76 121 aa12.2□□□□□ -0.46
RABGGTA-203ENST00000543002 RPL35P42766 123 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-203ENST00000543002 ZNF506Q5JVG8 444 aa12.2□□□□□ -0.46
RABGGTA-203ENST00000543002 IBA57Q5T440 356 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-203ENST00000543002 ZC2HC1AQ96GY0 325 aa12.2□□□□□ -0.46
RABGGTA-203ENST00000543002 DERL1Q9BUN8 251 aa12.2□□□□□ -0.46
RABGGTA-203ENST00000543002 NOP10Q9NPE3 64 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-203ENST00000543002 NAGKQ9UJ70 344 aa12.2□□□□□ -0.46
RABGGTA-203ENST00000543002 DNAH7Q8WXX0 4024 aa12.19□□□□□ -0.46
RABGGTA-203ENST00000543002 FABP5P3A8MUU1 101 aa12.19□□□□□ -0.46
RABGGTA-203ENST00000543002 DAZ2Q13117 558 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-203ENST00000543002 CASC10Q5T4H9 136 aa12.19□□□□□ -0.46
RABGGTA-203ENST00000543002 Q6ZTC4 211 aa12.19□□□□□ -0.46
RABGGTA-203ENST00000543002 ZNF767PQ75MW2 155 aa12.19□□□□□ -0.46
RABGGTA-203ENST00000543002 BAGE2Q86Y30 109 aa12.19□□□□□ -0.46
RABGGTA-203ENST00000543002 PHLDA1Q8WV24 401 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-203ENST00000543002 PCNPQ8WW12 178 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-203ENST00000543002 KCNS1Q96KK3 526 aa12.19□□□□□ -0.46
RABGGTA-203ENST00000543002 GSN-AS1Q9NRJ2 163 aa12.19□□□□□ -0.46
RABGGTA-203ENST00000543002 MED9Q9NWA0 146 aa12.19□□□□□ -0.46
RABGGTA-203ENST00000543002 C11orf21Q9P2W6 132 aa12.19□□□□□ -0.46
RABGGTA-203ENST00000543002 TRGV11A0A075B6L2 103 aa12.18□□□□□ -0.46
RABGGTA-203ENST00000543002 CRIP1P50238 77 aa12.18□□□□□ -0.46
RABGGTA-203ENST00000543002 TCL1AP56279 114 aa12.18□□□□□ -0.46
RABGGTA-203ENST00000543002 FAM210AQ96ND0 272 aa12.18□□□□□ -0.46
RABGGTA-203ENST00000543002 MLST8Q9BVC4 326 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms