RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 BSXQ3C1V8 233 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 NMSQ5H8A3 153 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.98□□□□□ -1.77
CPSF7-220ENST00000541963 COL5A1-AS1Q5SY13 56 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 C1orf194Q5T5A4 169 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 TOMM20LQ6UXN7 152 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 ADAMTSL5Q6ZMM2 481 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 Q6ZRP5 223 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 LYZL2Q7Z4W2 148 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 TMEM61Q8N0U2 210 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 KIR2DL5AQ8N109 375 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 OR4X1Q8NH49 305 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 DTD1Q8TEA8 209 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 Q8WTZ3 238 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 CACNG8Q8WXS5 425 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 HIST1H2BHQ93079 126 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 FAM210BQ96KR6 192 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 FAM218AQ96MZ4 157 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 CIB3Q96Q77 187 aaPredicted RBP3.98□□□□□ -1.77
CPSF7-220ENST00000541963 HIST1H2BNQ99877 126 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 HIST1H2BMQ99879 126 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 OVOL2Q9BRP0 275 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 RNF126Q9BV68 326 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 SMPXQ9UHP9 88 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 PRKDCP78527 4128 aaKnown RBP3.98□□□□□ -1.77
CPSF7-220ENST00000541963 A0A087X002 238 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 LOC102724200A0A096LPH7 203 aaPredicted RBP3.97□□□□□ -1.77
CPSF7-220ENST00000541963 K7EQD1 137 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 ZNF207O43670 478 aaKnown RBP3.97□□□□□ -1.77
CPSF7-220ENST00000541963 DEDDO75618 318 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 IGHV3-48P01763 117 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 CD7P09564 240 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 FABP4P15090 132 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 CDKN1BP46527 198 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 CEBPGP53567 150 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 BAXQ07812 192 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 IL15RAQ13261 267 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 ELOBQ15370 118 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 TMEM183BQ1AE95 376 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 ZNF506Q5JVG8 444 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 DEFB125Q8N687 156 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 OR10C1Q96KK4 312 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 RCHY1Q96PM5 261 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 METTL26Q96S19 204 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 HIST1H2BLQ99880 126 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 C20orf144Q9BQM9 153 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 RHPN1-AS1Q9BWJ2 59 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 SLC25A31Q9H0C2 315 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 RBKSQ9H477 322 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 ZFP30Q9Y2G7 519 aa3.97□□□□□ -1.77
CPSF7-220ENST00000541963 PUS1Q9Y606 427 aaKnown RBP eCLIP3.97□□□□□ -1.77
CPSF7-220ENST00000541963 DNAH9Q9NYC9 4486 aa3.96□□□□□ -1.77
CPSF7-220ENST00000541963 NOTCH1P46531 2555 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 TRAV9-1A0A075B6T8 112 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 IGHV3OR16-8A0A075B7F1 116 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 RBFOX3A6NFN3 312 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 C3orf84H3BNL1 204 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 H3BQ15 152 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 K7EP13 123 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 PHOX2AO14813 284 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 SYNGR2O43760 224 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 PITX3O75364 302 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 PPBPP02775 128 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 RD3LP0DJH9 198 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 GZMBP10144 247 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 ZNF25P17030 456 aaPredicted RBP3.96□□□□□ -1.78
CPSF7-220ENST00000541963 S100A7P31151 101 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 FHITP49789 147 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 CNN1P51911 297 aaKnown RBP3.96□□□□□ -1.78
CPSF7-220ENST00000541963 APOC4P55056 127 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 YPEL3P61236 119 aaPredicted RBP3.96□□□□□ -1.78
CPSF7-220ENST00000541963 COX19Q49B96 90 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 KCNIP4Q6PIL6 250 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 SSX7Q7RTT5 188 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 TCF24Q7RTU0 167 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 ORAOV1Q8WV07 137 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 SLC35E1Q96K37 410 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 RNF2Q99496 336 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 TM2D3Q9BRN9 247 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 TMEM208Q9BTX3 173 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 GGTLC1Q9BX51 225 aa3.96□□□□□ -1.78
CPSF7-220ENST00000541963 FNDC4Q9H6D8 234 aaPredicted RBP3.96□□□□□ -1.78
CPSF7-220ENST00000541963 IGHV3-49A0A0A0MS15 119 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 TRAV2A0A0B4J234 112 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 C20orf202A1L168 122 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 HELTA6NFD8 242 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 ZFP92A6NM28 416 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 TYMSP04818 313 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 HERV-K104P63124 156 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 TIGITQ495A1 244 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 LEMD1Q68G75 181 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 RPL7L1Q6DKI1 246 aaKnown RBP3.95□□□□□ -1.78
CPSF7-220ENST00000541963 LINC00322Q6ZN03 302 aaPredicted RBP3.95□□□□□ -1.78
CPSF7-220ENST00000541963 OR4B1Q8NGF8 309 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 ISOC2Q96AB3 205 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 SMIM12Q96EX1 92 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 PYGO2Q9BRQ0 406 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 MIEN1Q9BRT3 115 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 VSIRQ9H7M9 311 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms