RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 ATP5G3P48201 142 aa13.96□□□□□ -0.17
DDX55-207ENST00000540763 PRR9Q5T870 116 aa13.96□□□□□ -0.17
DDX55-207ENST00000540763 ZNF493Q6ZR52 646 aa13.96□□□□□ -0.17
DDX55-207ENST00000540763 C16orf74Q96GX8 76 aa13.96□□□□□ -0.17
DDX55-207ENST00000540763 PSG8Q9UQ74 426 aa13.96□□□□□ -0.17
DDX55-207ENST00000540763 ZNF705GA8MUZ8 300 aaPredicted RBP13.95□□□□□ -0.18
DDX55-207ENST00000540763 IFNA1P01562 189 aa13.95□□□□□ -0.18
DDX55-207ENST00000540763 RNASE4P34096 147 aaKnown RBP13.95□□□□□ -0.18
DDX55-207ENST00000540763 TAGLN2P37802 199 aaKnown RBP13.95□□□□□ -0.18
DDX55-207ENST00000540763 SAPCD1Q5SSQ6 148 aa13.95□□□□□ -0.18
DDX55-207ENST00000540763 C11orf45Q8TAV5 145 aa13.95□□□□□ -0.18
DDX55-207ENST00000540763 TMEM263Q8WUH6 116 aaKnown RBP13.95□□□□□ -0.18
DDX55-207ENST00000540763 TREM1Q9NP99 234 aa13.95□□□□□ -0.18
DDX55-207ENST00000540763 GNG13Q9P2W3 67 aa13.95□□□□□ -0.18
DDX55-207ENST00000540763 TRBV6-1A0A0K0K1D8 114 aa13.94□□□□□ -0.18
DDX55-207ENST00000540763 C11orf94C9JXX5 98 aa13.94□□□□□ -0.18
DDX55-207ENST00000540763 CCL20P78556 96 aa13.94□□□□□ -0.18
DDX55-207ENST00000540763 RNASE8Q8TDE3 154 aaKnown RBP13.94□□□□□ -0.18
DDX55-207ENST00000540763 TVP23CQ96ET8 276 aa13.94□□□□□ -0.18
DDX55-207ENST00000540763 FMC1Q96HJ9 113 aa13.94□□□□□ -0.18
DDX55-207ENST00000540763 KLF12Q9Y4X4 402 aa13.94□□□□□ -0.18
DDX55-207ENST00000540763 ANXA2RQ3ZCQ2 193 aa13.93□□□□□ -0.18
DDX55-207ENST00000540763 Q86TA4 180 aa13.93□□□□□ -0.18
DDX55-207ENST00000540763 LYPD6BQ8NI32 183 aa13.93□□□□□ -0.18
DDX55-207ENST00000540763 PLAC8L1A1L4L8 177 aa13.92□□□□□ -0.18
DDX55-207ENST00000540763 CXorf65A6NEN9 183 aa13.92□□□□□ -0.18
DDX55-207ENST00000540763 S100A9P06702 114 aaKnown RBP13.92□□□□□ -0.18
DDX55-207ENST00000540763 SPART-AS1P0CW21 52 aa13.92□□□□□ -0.18
DDX55-207ENST00000540763 AKR1C3P42330 323 aa13.92□□□□□ -0.18
DDX55-207ENST00000540763 PRNTQ86SH4 94 aa13.92□□□□□ -0.18
DDX55-207ENST00000540763 EIF4E3Q8N5X7 224 aaKnown RBP13.92□□□□□ -0.18
DDX55-207ENST00000540763 ZNF680Q8NEM1 530 aa13.92□□□□□ -0.18
DDX55-207ENST00000540763 SGK494Q96LW2 274 aa13.92□□□□□ -0.18
DDX55-207ENST00000540763 DKK2Q9UBU2 259 aa13.92□□□□□ -0.18
DDX55-207ENST00000540763 TRAV21A0A0B4J279 112 aa13.91□□□□□ -0.18
DDX55-207ENST00000540763 LYRM9A8MSI8 78 aa13.91□□□□□ -0.18
DDX55-207ENST00000540763 RGS13O14921 159 aa13.91□□□□□ -0.18
DDX55-207ENST00000540763 BCL2P10415 239 aa13.91□□□□□ -0.18
DDX55-207ENST00000540763 AZU1P20160 251 aa13.91□□□□□ -0.18
DDX55-207ENST00000540763 UBE2G1P62253 170 aa13.91□□□□□ -0.18
DDX55-207ENST00000540763 TMEM183BQ1AE95 376 aa13.91□□□□□ -0.18
DDX55-207ENST00000540763 TEX261Q6UWH6 196 aa13.91□□□□□ -0.18
DDX55-207ENST00000540763 C2CD4CQ8TF44 421 aa13.91□□□□□ -0.18
DDX55-207ENST00000540763 C11orf52Q96A22 123 aa13.91□□□□□ -0.18
DDX55-207ENST00000540763 CELA1Q9UNI1 258 aa13.91□□□□□ -0.18
DDX55-207ENST00000540763 ZFP30Q9Y2G7 519 aa13.91□□□□□ -0.18
DDX55-207ENST00000540763 IGHV1OR15-1A0A075B7D0 117 aa13.9□□□□□ -0.18
DDX55-207ENST00000540763 TRAV34A0A0B4J273 112 aa13.9□□□□□ -0.18
DDX55-207ENST00000540763 MEF2BQ02080 365 aaPredicted RBP13.9□□□□□ -0.18
DDX55-207ENST00000540763 SMUG1Q53HV7 270 aa13.9□□□□□ -0.18
DDX55-207ENST00000540763 FAM222AQ5U5X8 452 aa13.9□□□□□ -0.18
DDX55-207ENST00000540763 COX8CQ7Z4L0 72 aa13.9□□□□□ -0.18
DDX55-207ENST00000540763 LINC00479Q96M42 142 aa13.9□□□□□ -0.18
DDX55-207ENST00000540763 TIMM8BQ9Y5J9 83 aaPredicted RBP13.9□□□□□ -0.18
DDX55-207ENST00000540763 SCO2A0A1W2PP80 73 aa13.89□□□□□ -0.19
DDX55-207ENST00000540763 NUPR2A6NF83 97 aa13.89□□□□□ -0.19
DDX55-207ENST00000540763 HTN1P15515 57 aa13.89□□□□□ -0.19
DDX55-207ENST00000540763 EMP1P54849 157 aa13.89□□□□□ -0.19
DDX55-207ENST00000540763 NANOS2P60321 138 aaKnown RBP13.89□□□□□ -0.19
DDX55-207ENST00000540763 TDRG1Q3Y452 100 aa13.89□□□□□ -0.19
DDX55-207ENST00000540763 IBA57Q5T440 356 aaKnown RBP13.89□□□□□ -0.19
DDX55-207ENST00000540763 CASC10Q5T4H9 136 aa13.89□□□□□ -0.19
DDX55-207ENST00000540763 VAX2Q9UIW0 290 aa13.89□□□□□ -0.19
DDX55-207ENST00000540763 PDE6DO43924 150 aa13.88□□□□□ -0.19
DDX55-207ENST00000540763 LTAP01374 205 aa13.88□□□□□ -0.19
DDX55-207ENST00000540763 PRM2P04554 102 aa13.88□□□□□ -0.19
DDX55-207ENST00000540763 PFN1P07737 140 aaKnown RBP13.88□□□□□ -0.19
DDX55-207ENST00000540763 C8orf49Q96NF6 230 aa13.88□□□□□ -0.19
DDX55-207ENST00000540763 CBY3A6NI87 242 aa13.87□□□□□ -0.19
DDX55-207ENST00000540763 SNURFLB1AK76 121 aa13.87□□□□□ -0.19
DDX55-207ENST00000540763 GCGP01275 180 aa13.87□□□□□ -0.19
DDX55-207ENST00000540763 FAM159AQ6UWV7 190 aa13.87□□□□□ -0.19
DDX55-207ENST00000540763 DAZ2Q13117 558 aaKnown RBP13.86□□□□□ -0.19
DDX55-207ENST00000540763 C12orf74Q32Q52 190 aa13.86□□□□□ -0.19
DDX55-207ENST00000540763 Q6ZQT7 251 aa13.86□□□□□ -0.19
DDX55-207ENST00000540763 C11orf72Q8NBR9 251 aa13.86□□□□□ -0.19
DDX55-207ENST00000540763 PHLDA1Q8WV24 401 aaPredicted RBP13.86□□□□□ -0.19
DDX55-207ENST00000540763 KCNS1Q96KK3 526 aa13.86□□□□□ -0.19
DDX55-207ENST00000540763 TRGV11A0A075B6L2 103 aa13.85□□□□□ -0.19
DDX55-207ENST00000540763 ZNF80P51504 273 aaPredicted RBP13.85□□□□□ -0.19
DDX55-207ENST00000540763 ZFAND6Q6FIF0 208 aa13.85□□□□□ -0.19
DDX55-207ENST00000540763 TP53TG3Q9ULZ0 132 aa13.85□□□□□ -0.19
DDX55-207ENST00000540763 TRAV10A0A0B4J240 114 aa13.84□□□□□ -0.19
DDX55-207ENST00000540763 NDUFS6O75380 124 aaKnown RBP13.84□□□□□ -0.19
DDX55-207ENST00000540763 TCL1AP56279 114 aa13.84□□□□□ -0.19
DDX55-207ENST00000540763 ZNF415Q09FC8 603 aa13.84□□□□□ -0.19
DDX55-207ENST00000540763 CEMP1Q6PRD7 247 aaPredicted RBP13.84□□□□□ -0.19
DDX55-207ENST00000540763 Q6ZTC4 211 aa13.84□□□□□ -0.19
DDX55-207ENST00000540763 TMEM183AQ8IXX5 376 aa13.84□□□□□ -0.19
DDX55-207ENST00000540763 TENM2Q9NT68 2774 aa13.84□□□□□ -0.19
DDX55-207ENST00000540763 CSMD3Q7Z407 3707 aa13.83□□□□□ -0.2
DDX55-207ENST00000540763 FABP5P3A8MUU1 101 aa13.83□□□□□ -0.2
DDX55-207ENST00000540763 DAD1P61803 113 aa13.83□□□□□ -0.2
DDX55-207ENST00000540763 MUC21Q5SSG8 566 aa13.83□□□□□ -0.2
DDX55-207ENST00000540763 LINC00612Q8N6U2 182 aa13.83□□□□□ -0.2
DDX55-207ENST00000540763 SDF2L1Q9HCN8 221 aa13.83□□□□□ -0.2
DDX55-207ENST00000540763 NOP10Q9NPE3 64 aaKnown RBP13.83□□□□□ -0.2
DDX55-207ENST00000540763 KLK5Q9Y337 293 aaPredicted RBP13.83□□□□□ -0.2
DDX55-207ENST00000540763 RBFOX3A6NFN3 312 aa13.82□□□□□ -0.2
DDX55-207ENST00000540763 RPL35P42766 123 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms