RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 C11orf72Q8NBR9 251 aa12.92□□□□□ -0.34
SNRPA1-203ENST00000540017 TMED6Q8WW62 240 aa12.92□□□□□ -0.34
SNRPA1-203ENST00000540017 SGK494Q96LW2 274 aa12.92□□□□□ -0.34
SNRPA1-203ENST00000540017 ZNF471Q9BX82 626 aaPredicted RBP12.92□□□□□ -0.34
SNRPA1-203ENST00000540017 LENEPQ9Y5L5 61 aa12.92□□□□□ -0.34
SNRPA1-203ENST00000540017 KMT2AQ03164 3969 aa12.92□□□□□ -0.34
SNRPA1-203ENST00000540017 KANTRA0A1W2PQU2 76 aa12.91□□□□□ -0.34
SNRPA1-203ENST00000540017 TCRAP04437 139 aa12.91□□□□□ -0.34
SNRPA1-203ENST00000540017 ANXA2RQ3ZCQ2 193 aa12.91□□□□□ -0.34
SNRPA1-203ENST00000540017 TCTE3Q8IZS6 198 aa12.91□□□□□ -0.34
SNRPA1-203ENST00000540017 LINC00612Q8N6U2 182 aa12.91□□□□□ -0.34
SNRPA1-203ENST00000540017 NDUFAF3Q9BU61 184 aa12.91□□□□□ -0.34
SNRPA1-203ENST00000540017 GSN-AS1Q9NRJ2 163 aa12.91□□□□□ -0.34
SNRPA1-203ENST00000540017 hCG_2014768A0A024R1R8 64 aa12.9□□□□□ -0.34
SNRPA1-203ENST00000540017 IGHV1OR15-1A0A075B7D0 117 aa12.9□□□□□ -0.34
SNRPA1-203ENST00000540017 MAP1LC3B2A6NCE7 125 aa12.9□□□□□ -0.34
SNRPA1-203ENST00000540017 CBY3A6NI87 242 aa12.9□□□□□ -0.34
SNRPA1-203ENST00000540017 SNURFLB1AK76 121 aa12.9□□□□□ -0.34
SNRPA1-203ENST00000540017 SEC11BP0C7V7 166 aa12.9□□□□□ -0.34
SNRPA1-203ENST00000540017 UBE2G2P60604 165 aa12.9□□□□□ -0.34
SNRPA1-203ENST00000540017 Q6AWC8 147 aa12.9□□□□□ -0.34
SNRPA1-203ENST00000540017 MAP1LC3BQ9GZQ8 125 aa12.9□□□□□ -0.34
SNRPA1-203ENST00000540017 EPDR1Q9UM22 224 aa12.9□□□□□ -0.34
SNRPA1-203ENST00000540017 A0A1W2PRE2 83 aa12.89□□□□□ -0.35
SNRPA1-203ENST00000540017 RGS13O14921 159 aa12.89□□□□□ -0.35
SNRPA1-203ENST00000540017 IGLV2-11P01706 119 aa12.89□□□□□ -0.35
SNRPA1-203ENST00000540017 LGALSLQ3ZCW2 172 aaPredicted RBP12.89□□□□□ -0.35
SNRPA1-203ENST00000540017 MUC21Q5SSG8 566 aa12.89□□□□□ -0.35
SNRPA1-203ENST00000540017 TMEM88Q6PEY1 159 aa12.89□□□□□ -0.35
SNRPA1-203ENST00000540017 KLF12Q9Y4X4 402 aa12.89□□□□□ -0.35
SNRPA1-203ENST00000540017 GAGE12BA1L429 117 aa12.88□□□□□ -0.35
SNRPA1-203ENST00000540017 F6UZH7 168 aa12.88□□□□□ -0.35
SNRPA1-203ENST00000540017 GAGE7O76087 117 aa12.88□□□□□ -0.35
SNRPA1-203ENST00000540017 GAGE12FP0CL80 117 aa12.88□□□□□ -0.35
SNRPA1-203ENST00000540017 GAGE12GP0CL81 117 aa12.88□□□□□ -0.35
SNRPA1-203ENST00000540017 GAGE12IP0CL82 117 aa12.88□□□□□ -0.35
SNRPA1-203ENST00000540017 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-203ENST00000540017 Q6ZTI0 123 aa12.88□□□□□ -0.35
SNRPA1-203ENST00000540017 FAM210BQ96KR6 192 aa12.88□□□□□ -0.35
SNRPA1-203ENST00000540017 SERTM2A0A1B0GWG4 89 aa12.87□□□□□ -0.35
SNRPA1-203ENST00000540017 FAM74A7A6NL05 159 aa12.87□□□□□ -0.35
SNRPA1-203ENST00000540017 PFDN1O60925 122 aa12.87□□□□□ -0.35
SNRPA1-203ENST00000540017 ATP5G1P05496 136 aa12.87□□□□□ -0.35
SNRPA1-203ENST00000540017 ATP5G3P48201 142 aa12.87□□□□□ -0.35
SNRPA1-203ENST00000540017 ZNF680Q8NEM1 530 aa12.87□□□□□ -0.35
SNRPA1-203ENST00000540017 TREM1Q9NP99 234 aa12.87□□□□□ -0.35
SNRPA1-203ENST00000540017 F5H768 121 aa12.86□□□□□ -0.35
SNRPA1-203ENST00000540017 C1QBP02746 253 aa12.86□□□□□ -0.35
SNRPA1-203ENST00000540017 TCL1AP56279 114 aa12.86□□□□□ -0.35
SNRPA1-203ENST00000540017 CYB561D1Q8N8Q1 229 aa12.86□□□□□ -0.35
SNRPA1-203ENST00000540017 FAM213BQ8TBF2 198 aa12.86□□□□□ -0.35
SNRPA1-203ENST00000540017 LINC00479Q96M42 142 aa12.86□□□□□ -0.35
SNRPA1-203ENST00000540017 C8orf49Q96NF6 230 aa12.86□□□□□ -0.35
SNRPA1-203ENST00000540017 PSG8Q9UQ74 426 aa12.86□□□□□ -0.35
SNRPA1-203ENST00000540017 UMAD1C9J7I0 102 aa12.85□□□□□ -0.35
SNRPA1-203ENST00000540017 FLI1Q01543 452 aaPredicted RBP12.85□□□□□ -0.35
SNRPA1-203ENST00000540017 IBA57Q5T440 356 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-203ENST00000540017 STOML3Q8TAV4 291 aa12.85□□□□□ -0.35
SNRPA1-203ENST00000540017 MBD3L1Q8WWY6 194 aa12.85□□□□□ -0.35
SNRPA1-203ENST00000540017 ATG101Q9BSB4 218 aa12.85□□□□□ -0.35
SNRPA1-203ENST00000540017 DNAH6Q9C0G6 4158 aa12.84□□□□□ -0.35
SNRPA1-203ENST00000540017 TRAV34A0A0B4J273 112 aa12.84□□□□□ -0.35
SNRPA1-203ENST00000540017 IFNA7P01567 189 aa12.84□□□□□ -0.35
SNRPA1-203ENST00000540017 TPT1P13693 172 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-203ENST00000540017 ZNF80P51504 273 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-203ENST00000540017 EIF5AP63241 154 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-203ENST00000540017 PRNTQ86SH4 94 aa12.84□□□□□ -0.35
SNRPA1-203ENST00000540017 TMEM75Q8N9X5 138 aa12.84□□□□□ -0.35
SNRPA1-203ENST00000540017 SFT2D1Q8WV19 159 aa12.84□□□□□ -0.35
SNRPA1-203ENST00000540017 MDFICQ9P1T7 246 aa12.84□□□□□ -0.35
SNRPA1-203ENST00000540017 TRGV1A0A0A0MS02 117 aa12.83□□□□□ -0.36
SNRPA1-203ENST00000540017 A0A1B0GV50 99 aa12.83□□□□□ -0.36
SNRPA1-203ENST00000540017 A0A1B0GVG6 124 aa12.83□□□□□ -0.36
SNRPA1-203ENST00000540017 K7EQM0 130 aa12.83□□□□□ -0.36
SNRPA1-203ENST00000540017 SPINK4O60575 86 aa12.83□□□□□ -0.36
SNRPA1-203ENST00000540017 HOXA5P20719 270 aa12.83□□□□□ -0.36
SNRPA1-203ENST00000540017 AKAP14Q86UN6 197 aa12.83□□□□□ -0.36
SNRPA1-203ENST00000540017 NAGKQ9UJ70 344 aa12.83□□□□□ -0.36
SNRPA1-203ENST00000540017 TRAV21A0A0B4J279 112 aa12.82□□□□□ -0.36
SNRPA1-203ENST00000540017 PEX7O00628 323 aa12.82□□□□□ -0.36
SNRPA1-203ENST00000540017 GNRH2O43555 120 aa12.82□□□□□ -0.36
SNRPA1-203ENST00000540017 TMEM183BQ1AE95 376 aa12.82□□□□□ -0.36
SNRPA1-203ENST00000540017 TDRG1Q3Y452 100 aa12.82□□□□□ -0.36
SNRPA1-203ENST00000540017 FAM159AQ6UWV7 190 aa12.82□□□□□ -0.36
SNRPA1-203ENST00000540017 TMEM183AQ8IXX5 376 aa12.82□□□□□ -0.36
SNRPA1-203ENST00000540017 MRPL16Q9NX20 251 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-203ENST00000540017 C11orf21Q9P2W6 132 aa12.82□□□□□ -0.36
SNRPA1-203ENST00000540017 P0DMU3 169 aa12.81□□□□□ -0.36
SNRPA1-203ENST00000540017 FAM231AP0DMU4 169 aa12.81□□□□□ -0.36
SNRPA1-203ENST00000540017 FAM231CP0DMU5 169 aa12.81□□□□□ -0.36
SNRPA1-203ENST00000540017 ZNF415Q09FC8 603 aa12.81□□□□□ -0.36
SNRPA1-203ENST00000540017 DPPA3Q6W0C5 159 aa12.81□□□□□ -0.36
SNRPA1-203ENST00000540017 NDFIP1Q9BT67 221 aa12.81□□□□□ -0.36
SNRPA1-203ENST00000540017 NKX6-2Q9C056 277 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-203ENST00000540017 PAGE4O60829 102 aa12.8□□□□□ -0.36
SNRPA1-203ENST00000540017 GCGP01275 180 aa12.8□□□□□ -0.36
SNRPA1-203ENST00000540017 OR5I1Q13606 314 aa12.8□□□□□ -0.36
SNRPA1-203ENST00000540017 CST9LP1Q5W188 147 aa12.8□□□□□ -0.36
SNRPA1-203ENST00000540017 POM121L12Q8N7R1 296 aa12.8□□□□□ -0.36
SNRPA1-203ENST00000540017 C15orf53Q8NAA6 179 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms