RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 ACTL10Q5JWF8 245 aa8.81□□□□□ -1
VTN-202ENST00000539746 WDR73Q6P4I2 378 aa8.81□□□□□ -1
VTN-202ENST00000539746 TMEM88Q6PEY1 159 aa8.81□□□□□ -1
VTN-202ENST00000539746 FAM159AQ6UWV7 190 aa8.81□□□□□ -1
VTN-202ENST00000539746 SMIM15Q7Z3B0 74 aa8.81□□□□□ -1
VTN-202ENST00000539746 LINC00479Q96M42 142 aa8.81□□□□□ -1
VTN-202ENST00000539746 NF1P21359 2839 aa8.81□□□□□ -1
VTN-202ENST00000539746 TRAV8-1A0A0A6YYK1 113 aa8.8□□□□□ -1
VTN-202ENST00000539746 C7orf71A4D174 169 aa8.8□□□□□ -1
VTN-202ENST00000539746 COLCA2A8K830 154 aa8.8□□□□□ -1
VTN-202ENST00000539746 A8MTW9 85 aa8.8□□□□□ -1
VTN-202ENST00000539746 H3BMM0 161 aa8.8□□□□□ -1
VTN-202ENST00000539746 MT-ND6P03923 174 aa8.8□□□□□ -1
VTN-202ENST00000539746 APOC4P55056 127 aa8.8□□□□□ -1
VTN-202ENST00000539746 CBLN2Q8IUK8 224 aa8.8□□□□□ -1
VTN-202ENST00000539746 APRG1Q8IVJ8 170 aa8.8□□□□□ -1
VTN-202ENST00000539746 OR2D3Q8NGH3 330 aa8.8□□□□□ -1
VTN-202ENST00000539746 C20orf173Q96LM9 149 aa8.8□□□□□ -1
VTN-202ENST00000539746 TRGV11A0A075B6L2 103 aa8.79□□□□□ -1
VTN-202ENST00000539746 C19orf71A6NCJ1 209 aa8.79□□□□□ -1
VTN-202ENST00000539746 KLLNB2CW77 178 aa8.79□□□□□ -1
VTN-202ENST00000539746 ORM1P02763 201 aa8.79□□□□□ -1
VTN-202ENST00000539746 MED14OSP0DP75 135 aa8.79□□□□□ -1
VTN-202ENST00000539746 RAB5BP61020 215 aa8.79□□□□□ -1
VTN-202ENST00000539746 KRTAP21-3Q3LHN1 58 aa8.79□□□□□ -1
VTN-202ENST00000539746 LINC01559Q495D7 138 aa8.79□□□□□ -1
VTN-202ENST00000539746 IGFL4Q6B9Z1 124 aa8.79□□□□□ -1
VTN-202ENST00000539746 NUDT10Q8NFP7 164 aa8.79□□□□□ -1
VTN-202ENST00000539746 NUDT11Q96G61 164 aa8.79□□□□□ -1
VTN-202ENST00000539746 ZC2HC1AQ96GY0 325 aa8.79□□□□□ -1
VTN-202ENST00000539746 GOLT1BQ9Y3E0 138 aa8.79□□□□□ -1
VTN-202ENST00000539746 TRBV24-1A0A075B6N3 115 aa8.78□□□□□ -1
VTN-202ENST00000539746 KIR2DL5BA0A0G2JN68 375 aa8.78□□□□□ -1
VTN-202ENST00000539746 KIR2DL5BA0A0G2JPC4 375 aa8.78□□□□□ -1
VTN-202ENST00000539746 K7EN84 100 aa8.78□□□□□ -1
VTN-202ENST00000539746 UBE2CO00762 179 aa8.78□□□□□ -1
VTN-202ENST00000539746 SH2D1AO60880 128 aa8.78□□□□□ -1
VTN-202ENST00000539746 IGLV2-8P01709 118 aa8.78□□□□□ -1
VTN-202ENST00000539746 S100A4P26447 101 aaKnown RBP8.78□□□□□ -1
VTN-202ENST00000539746 HLA-DMBP28068 263 aa8.78□□□□□ -1
VTN-202ENST00000539746 ASIPP42127 132 aa8.78□□□□□ -1
VTN-202ENST00000539746 FAM3BP58499 235 aaPredicted RBP8.78□□□□□ -1
VTN-202ENST00000539746 CACNG7P62955 275 aa8.78□□□□□ -1
VTN-202ENST00000539746 ERCC8Q13216 396 aa8.78□□□□□ -1
VTN-202ENST00000539746 RIGQ13278 110 aa8.78□□□□□ -1
VTN-202ENST00000539746 KIR2DL5AQ8N109 375 aa8.78□□□□□ -1
VTN-202ENST00000539746 KIR2DL5BQ8NHK3 375 aa8.78□□□□□ -1
VTN-202ENST00000539746 SPATA3Q8NHX4 192 aa8.78□□□□□ -1
VTN-202ENST00000539746 Q8TAT8 98 aa8.78□□□□□ -1
VTN-202ENST00000539746 FAM19A4Q96LR4 140 aa8.78□□□□□ -1
VTN-202ENST00000539746 PYGO2Q9BRQ0 406 aa8.78□□□□□ -1
VTN-202ENST00000539746 NDUFAF3Q9BU61 184 aa8.78□□□□□ -1
VTN-202ENST00000539746 JMJD1CQ15652 2540 aa8.77□□□□□ -1.01
VTN-202ENST00000539746 SMIM27A0A1W2PRY6 76 aa8.77□□□□□ -1.01
VTN-202ENST00000539746 C1orf196B1AJZ1 125 aa8.77□□□□□ -1.01
VTN-202ENST00000539746 PRAC2D3DTV9 90 aa8.77□□□□□ -1.01
VTN-202ENST00000539746 NHLRC2Q8NBF2 726 aa8.77□□□□□ -1.01
VTN-202ENST00000539746 SGK494Q96LW2 274 aa8.77□□□□□ -1.01
VTN-202ENST00000539746 LINC00467Q9BRT7 94 aa8.77□□□□□ -1.01
VTN-202ENST00000539746 TMEM208Q9BTX3 173 aa8.77□□□□□ -1.01
VTN-202ENST00000539746 RNASE7Q9H1E1 156 aaKnown RBP8.77□□□□□ -1.01
VTN-202ENST00000539746 V9GYV3 84 aa8.77□□□□□ -1.01
VTN-202ENST00000539746 IZUMO1RA6ND01 250 aa8.76□□□□□ -1.01
VTN-202ENST00000539746 PGPEP1LA6NFU8 196 aa8.76□□□□□ -1.01
VTN-202ENST00000539746 EDN2P20800 178 aa8.76□□□□□ -1.01
VTN-202ENST00000539746 RNASE4P34096 147 aaKnown RBP8.76□□□□□ -1.01
VTN-202ENST00000539746 FOXA3P55318 350 aaPredicted RBP8.76□□□□□ -1.01
VTN-202ENST00000539746 ODF3L2Q3SX64 289 aa8.76□□□□□ -1.01
VTN-202ENST00000539746 TDRG1Q3Y452 100 aa8.76□□□□□ -1.01
VTN-202ENST00000539746 SYT8Q8NBV8 401 aa8.76□□□□□ -1.01
VTN-202ENST00000539746 A0A1B0GUT8 65 aa8.75□□□□□ -1.01
VTN-202ENST00000539746 RAB5AP20339 215 aa8.75□□□□□ -1.01
VTN-202ENST00000539746 TRPT1Q86TN4 253 aaKnown RBP8.75□□□□□ -1.01
VTN-202ENST00000539746 ZFAND2AQ8N6M9 145 aa8.75□□□□□ -1.01
VTN-202ENST00000539746 FER1L6-AS1Q8NA97 138 aa8.75□□□□□ -1.01
VTN-202ENST00000539746 FAM210BQ96KR6 192 aa8.75□□□□□ -1.01
VTN-202ENST00000539746 AURKAIP1Q9NWT8 199 aaPredicted RBP8.75□□□□□ -1.01
VTN-202ENST00000539746 LOC102724200A0A096LPH7 203 aaPredicted RBP8.74□□□□□ -1.01
VTN-202ENST00000539746 HIGD1CA8MV81 97 aa8.74□□□□□ -1.01
VTN-202ENST00000539746 HLA-DQA1P01909 254 aa8.74□□□□□ -1.01
VTN-202ENST00000539746 TYMSP04818 313 aa8.74□□□□□ -1.01
VTN-202ENST00000539746 OR5AL1P0C617 328 aa8.74□□□□□ -1.01
VTN-202ENST00000539746 TRGC1P0CF51 173 aa8.74□□□□□ -1.01
VTN-202ENST00000539746 IGLL1P15814 213 aa8.74□□□□□ -1.01
VTN-202ENST00000539746 PIK3CD-AS1Q5SR53 167 aa8.74□□□□□ -1.01
VTN-202ENST00000539746 DNLZQ5SXM8 178 aa8.74□□□□□ -1.01
VTN-202ENST00000539746 ZNF493Q6ZR52 646 aa8.74□□□□□ -1.01
VTN-202ENST00000539746 FAM24BQ8N5W8 94 aa8.74□□□□□ -1.01
VTN-202ENST00000539746 FRZBQ92765 325 aa8.74□□□□□ -1.01
VTN-202ENST00000539746 C8orf49Q96NF6 230 aa8.74□□□□□ -1.01
VTN-202ENST00000539746 IGHV1OR15-1A0A075B7D0 117 aa8.73□□□□□ -1.01
VTN-202ENST00000539746 SMIM9A6NGZ8 99 aa8.73□□□□□ -1.01
VTN-202ENST00000539746 KNCNA6PVL3 124 aa8.73□□□□□ -1.01
VTN-202ENST00000539746 F6UB75 175 aa8.73□□□□□ -1.01
VTN-202ENST00000539746 HBBP68871 147 aa8.73□□□□□ -1.01
VTN-202ENST00000539746 ZNF415Q09FC8 603 aa8.73□□□□□ -1.01
VTN-202ENST00000539746 EGFEM1PQ0D2K5 195 aa8.73□□□□□ -1.01
VTN-202ENST00000539746 YPEL4Q96NS1 127 aa8.73□□□□□ -1.01
VTN-202ENST00000539746 NEU1Q99519 415 aa8.73□□□□□ -1.01
VTN-202ENST00000539746 SPXQ9BT56 116 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms