RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 TIMD4Q96H15 378 aa9.76□□□□□ -0.85
SFSWAP-208ENST00000539506 NCOR2Q9Y618 2525 aa9.76□□□□□ -0.85
SFSWAP-208ENST00000539506 KLRB1Q12918 225 aa9.75□□□□□ -0.85
SFSWAP-208ENST00000539506 RNF182Q8N6D2 247 aa9.75□□□□□ -0.85
SFSWAP-208ENST00000539506 ARPC1AQ92747 370 aa9.75□□□□□ -0.85
SFSWAP-208ENST00000539506 FOXC2Q99958 501 aa9.75□□□□□ -0.85
SFSWAP-208ENST00000539506 TRBV6-1A0A0K0K1D8 114 aa9.75□□□□□ -0.85
SFSWAP-208ENST00000539506 CEACAM3P40198 252 aa9.74□□□□□ -0.85
SFSWAP-208ENST00000539506 AJUBAQ96IF1 538 aa9.74□□□□□ -0.85
SFSWAP-208ENST00000539506 NPFFR1Q9GZQ6 430 aa9.74□□□□□ -0.85
SFSWAP-208ENST00000539506 FABP2P12104 132 aa9.74□□□□□ -0.85
SFSWAP-208ENST00000539506 WFDC2Q14508 124 aa9.74□□□□□ -0.85
SFSWAP-208ENST00000539506 TTC9CQ8N5M4 171 aa9.74□□□□□ -0.85
SFSWAP-208ENST00000539506 AAMDCQ9H7C9 122 aa9.74□□□□□ -0.85
SFSWAP-208ENST00000539506 HIVEP3Q5T1R4 2406 aa9.74□□□□□ -0.85
SFSWAP-208ENST00000539506 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.73□□□□□ -0.85
SFSWAP-208ENST00000539506 HSD52Q0P140 79 aa9.73□□□□□ -0.85
SFSWAP-208ENST00000539506 PRAC2D3DTV9 90 aa9.73□□□□□ -0.85
SFSWAP-208ENST00000539506 SMAD5-AS1Q9Y6J3 95 aa9.73□□□□□ -0.85
SFSWAP-208ENST00000539506 IGHV7-81A0A0B4J1V7 117 aa9.73□□□□□ -0.85
SFSWAP-208ENST00000539506 TRAV40A0A0B4J280 105 aa9.73□□□□□ -0.85
SFSWAP-208ENST00000539506 CTSGP08311 255 aa9.73□□□□□ -0.85
SFSWAP-208ENST00000539506 MFAP4P55083 255 aa9.73□□□□□ -0.85
SFSWAP-208ENST00000539506 ZC2HC1BQ5TFG8 222 aa9.73□□□□□ -0.85
SFSWAP-208ENST00000539506 IGHG4P01861 327 aa9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 SMIM13P0DJ93 91 aa9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 ZNF575Q86XF7 245 aa9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 LYPD1Q8N2G4 141 aa9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 C21orf62Q9NYP8 219 aa9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 CELSR2Q9HCU4 2923 aa9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 H3BMG7 143 aa9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 EBI3Q14213 229 aa9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 LGALS9BQ3B8N2 356 aa9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 LGALS9CQ6DKI2 356 aa9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 DTX2Q86UW9 622 aa9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 MAPKAPK5-AS1Q8N8E1 139 aa9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 TMEM158Q8WZ71 300 aa9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 COL25A1Q9BXS0 654 aaPredicted RBP9.72□□□□□ -0.85
SFSWAP-208ENST00000539506 SIRPDQ9H106 197 aa9.71□□□□□ -0.85
SFSWAP-208ENST00000539506 UFC1Q9Y3C8 167 aa9.71□□□□□ -0.85
SFSWAP-208ENST00000539506 EFNA4P52798 201 aa9.71□□□□□ -0.85
SFSWAP-208ENST00000539506 Q8N9W7 124 aa9.71□□□□□ -0.85
SFSWAP-208ENST00000539506 ZNF48Q96MX3 618 aaPredicted RBP9.71□□□□□ -0.85
SFSWAP-208ENST00000539506 TMEM8BA6NDV4 472 aa9.71□□□□□ -0.86
SFSWAP-208ENST00000539506 TRGV3P03979 118 aa9.71□□□□□ -0.86
SFSWAP-208ENST00000539506 INSL3P51460 131 aa9.71□□□□□ -0.86
SFSWAP-208ENST00000539506 ETDBQ3ZM63 59 aa9.71□□□□□ -0.86
SFSWAP-208ENST00000539506 CHAC1Q9BUX1 264 aa9.71□□□□□ -0.86
SFSWAP-208ENST00000539506 LINC01548A6NM66 108 aa9.7□□□□□ -0.86
SFSWAP-208ENST00000539506 AZU1P20160 251 aa9.7□□□□□ -0.86
SFSWAP-208ENST00000539506 PRR25Q96S07 402 aa9.7□□□□□ -0.86
SFSWAP-208ENST00000539506 TSSC4Q9Y5U2 329 aaPredicted RBP9.7□□□□□ -0.86
SFSWAP-208ENST00000539506 CSMD2Q7Z408 3487 aa9.7□□□□□ -0.86
SFSWAP-208ENST00000539506 TRBV25-1A0A075B6N4 114 aa9.69□□□□□ -0.86
SFSWAP-208ENST00000539506 RPS20P60866 119 aaKnown RBP9.69□□□□□ -0.86
SFSWAP-208ENST00000539506 SAMD13Q5VXD3 122 aa9.69□□□□□ -0.86
SFSWAP-208ENST00000539506 NEGR1Q7Z3B1 354 aa9.69□□□□□ -0.86
SFSWAP-208ENST00000539506 TNFRSF6BO95407 300 aa9.69□□□□□ -0.86
SFSWAP-208ENST00000539506 PDE6HQ13956 83 aa9.69□□□□□ -0.86
SFSWAP-208ENST00000539506 LY6DQ14210 128 aa9.69□□□□□ -0.86
SFSWAP-208ENST00000539506 MRPL35Q9NZE8 188 aaKnown RBP9.69□□□□□ -0.86
SFSWAP-208ENST00000539506 DEFB1P60022 68 aa9.69□□□□□ -0.86
SFSWAP-208ENST00000539506 IL17RELQ6ZVW7 336 aa9.69□□□□□ -0.86
SFSWAP-208ENST00000539506 PSMG3-AS1Q96PY0 264 aa9.69□□□□□ -0.86
SFSWAP-208ENST00000539506 HHLA3Q9XRX5 114 aa9.69□□□□□ -0.86
SFSWAP-208ENST00000539506 ATP5G2Q06055 141 aa9.68□□□□□ -0.86
SFSWAP-208ENST00000539506 CCDC144NLQ6NUI1 221 aa9.68□□□□□ -0.86
SFSWAP-208ENST00000539506 GATD1Q8NB37 220 aa9.68□□□□□ -0.86
SFSWAP-208ENST00000539506 RNF185Q96GF1 192 aa9.68□□□□□ -0.86
SFSWAP-208ENST00000539506 MAP1LC3AQ9H492 121 aa9.68□□□□□ -0.86
SFSWAP-208ENST00000539506 UCNP55089 124 aa9.68□□□□□ -0.86
SFSWAP-208ENST00000539506 ZNF493Q6ZR52 646 aa9.68□□□□□ -0.86
SFSWAP-208ENST00000539506 OR4X2Q8NGF9 303 aa9.68□□□□□ -0.86
SFSWAP-208ENST00000539506 OR9G4Q8NGQ1 327 aa9.68□□□□□ -0.86
SFSWAP-208ENST00000539506 TGFAP01135 160 aa9.67□□□□□ -0.86
SFSWAP-208ENST00000539506 MINOS1Q5TGZ0 78 aa9.67□□□□□ -0.86
SFSWAP-208ENST00000539506 MINOS1-NBL1R4GNA1 71 aa9.67□□□□□ -0.86
SFSWAP-208ENST00000539506 IGKCP01834 107 aa9.67□□□□□ -0.86
SFSWAP-208ENST00000539506 PAX8Q06710 450 aa9.67□□□□□ -0.86
SFSWAP-208ENST00000539506 SPG11Q96JI7 2443 aa9.67□□□□□ -0.86
SFSWAP-208ENST00000539506 UBTD1Q9HAC8 227 aa9.67□□□□□ -0.86
SFSWAP-208ENST00000539506 G3V318 75 aa9.66□□□□□ -0.86
SFSWAP-208ENST00000539506 C19orf84I3L1E1 186 aa9.66□□□□□ -0.86
SFSWAP-208ENST00000539506 ATP6V0E1O15342 81 aa9.66□□□□□ -0.86
SFSWAP-208ENST00000539506 ECSCRQ19T08 205 aa9.66□□□□□ -0.86
SFSWAP-208ENST00000539506 C15orf32Q32M92 178 aa9.66□□□□□ -0.86
SFSWAP-208ENST00000539506 IGKV3-7A0A075B6H7 116 aa9.66□□□□□ -0.86
SFSWAP-208ENST00000539506 OOSP1A8MZH6 123 aa9.66□□□□□ -0.86
SFSWAP-208ENST00000539506 SAA4P35542 130 aa9.66□□□□□ -0.86
SFSWAP-208ENST00000539506 EMP1P54849 157 aa9.66□□□□□ -0.86
SFSWAP-208ENST00000539506 LMO4P61968 165 aa9.66□□□□□ -0.86
SFSWAP-208ENST00000539506 HIST1H4GQ99525 98 aa9.66□□□□□ -0.86
SFSWAP-208ENST00000539506 C11orf21Q9P2W6 132 aa9.66□□□□□ -0.86
SFSWAP-208ENST00000539506 U3KQK5 164 aa9.66□□□□□ -0.86
SFSWAP-208ENST00000539506 CRYBG3Q68DQ2 2970 aa9.65□□□□□ -0.86
SFSWAP-208ENST00000539506 CLEC3BP05452 202 aa9.65□□□□□ -0.86
SFSWAP-208ENST00000539506 SMIM17P0DL12 118 aa9.65□□□□□ -0.86
SFSWAP-208ENST00000539506 PF4V1P10720 104 aa9.65□□□□□ -0.86
SFSWAP-208ENST00000539506 ZNF502Q8TBZ5 544 aa9.65□□□□□ -0.86
SFSWAP-208ENST00000539506 BPESC1Q9GZL8 116 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms