RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 EPPK1P58107 5090 aaKnown RBP-0.01□□□□□ -2.41
CCDC7-208ENST00000537047 CTTNBP2Q8WZ74 1663 aa-0.01□□□□□ -2.41
CCDC7-208ENST00000537047 LOC107986453A0A1B0GWG9 222 aa-0.01□□□□□ -2.41
CCDC7-208ENST00000537047 GABARAPH6UMI1 98 aa-0.01□□□□□ -2.41
CCDC7-208ENST00000537047 SRP9P49458 86 aaKnown RBP-0.01□□□□□ -2.41
CCDC7-208ENST00000537047 FXYD3Q14802 87 aa-0.01□□□□□ -2.41
CCDC7-208ENST00000537047 ZNF56Q15929 161 aa-0.01□□□□□ -2.41
CCDC7-208ENST00000537047 ASB16-AS1Q495Z4 193 aa-0.01□□□□□ -2.41
CCDC7-208ENST00000537047 SPRR2GQ9BYE4 73 aa-0.01□□□□□ -2.41
CCDC7-208ENST00000537047 MRPL36Q9P0J6 103 aaKnown RBP-0.01□□□□□ -2.41
CCDC7-208ENST00000537047 USH2AO75445 5202 aa-0.01□□□□□ -2.41
CCDC7-208ENST00000537047 KIAA1549LQ6ZVL6 1849 aa-0.01□□□□□ -2.41
CCDC7-208ENST00000537047 HYDINQ4G0P3 5121 aa-0.01□□□□□ -2.41
CCDC7-208ENST00000537047 ROCK1Q13464 1354 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 LOC107984156A0A0G2JMH3 177 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 TRBV27A0A0K0K1C4 114 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 NBDYA0A0U1RRE5 68 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 MAP1LC3B2A6NCE7 125 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 IFITM5A6NNB3 132 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 CD3DP04234 171 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 S100A11P31949 105 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 LSM3P62310 102 aaKnown RBP-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 LINC00305Q7Z4B0 112 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 ARL17AQ8IVW1 177 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 C5orf56Q8N8D9 126 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 HOPXQ9BPY8 73 aaPredicted RBP-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 LXNQ9BS40 222 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 CCDC32Q9BV29 185 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 GID8Q9NWU2 228 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 PTPRZ1P23471 2315 aaPredicted RBP-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 KIAA1109Q2LD37 5005 aa-0.02□□□□□ -2.41
CCDC7-208ENST00000537047 DLC1Q96QB1 1528 aa-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 FGD6Q6ZV73 1430 aa-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 HMCN2Q8NDA2 5059 aa-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 TRAV13-1A0A0B4J241 112 aa-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 LOC101927531A0A1B0GV80 90 aa-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 TMEM30CPA0ZSE6 113 aa-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 TMEM238C9JI98 176 aa-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 H7BYZ3 331 aa-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 CRYBA4P53673 196 aa-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 TRIQKQ629K1 86 aa-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 OR8J3Q8NGG0 315 aa-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 DMBT1Q9UGM3 2413 aaPredicted RBP-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 SYNMO15061 1565 aa-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 IGSF10Q6WRI0 2623 aa-0.03□□□□□ -2.41
CCDC7-208ENST00000537047 USP54Q70EL1 1684 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 MYH3P11055 1940 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 ATG2AQ2TAZ0 1938 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 TMEM189A5PLL7 270 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 E5RI56 91 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 H3BMG7 143 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 FXYD1O00168 92 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 TPST1O60507 370 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 FAM107AO95990 144 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 ETV6P41212 452 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 GTF2A1P52655 376 aaPredicted RBP-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 RHOHQ15669 191 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 TMEM78Q5T7P6 136 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 Q5XG85 94 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 MORN4Q8NDC4 146 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 DMAC1Q96GE9 116 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 SMIM7Q9BQ49 75 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 FKBP11Q9NYL4 201 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 ATPIF1Q9UII2 106 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 ANKRD31Q8N7Z5 1873 aa-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 TCOF1Q13428 1488 aaKnown RBP-0.04□□□□□ -2.42
CCDC7-208ENST00000537047 ANK1P16157 1881 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 A0A0G2JMM0 328 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 TRBV7-6A0A0J9YX20 115 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 E7EQ34 232 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 EDF1O60869 148 aaKnown RBP-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 SLC25A4P12235 298 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 KLKP1Q107X0 134 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 LYPD5Q6UWN5 251 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 IDO2Q6ZQW0 420 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 VMO1Q7Z5L0 202 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 STX12Q86Y82 276 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 CDC26Q8NHZ8 85 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 COMMD3Q9UBI1 195 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 KNTC1P50748 2209 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 NUP210Q8TEM1 1887 aaPredicted RBP-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 STAB1Q9NY15 2570 aa-0.05□□□□□ -2.42
CCDC7-208ENST00000537047 A0A096LNT2 108 aa-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 A0A1W2PRE2 83 aa-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 PGRMC1O00264 195 aaKnown RBP-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 SPINK1P00995 79 aa-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 BLCAPP62952 87 aa-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 TEX29Q8N6K0 151 aa-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 ATG5Q9H1Y0 275 aa-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 PROK2Q9HC23 129 aa-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 TMEM14BQ9NUH8 114 aa-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 ZFYVE26Q68DK2 2539 aa-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 TRPM7Q96QT4 1865 aa-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 KDM6BO15054 1643 aa-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 TANC2Q9HCD6 1990 aa-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 RBBP6Q7Z6E9 1792 aaKnown RBP-0.06□□□□□ -2.42
CCDC7-208ENST00000537047 CRYGSP22914 178 aa-0.07□□□□□ -2.42
CCDC7-208ENST00000537047 Q5BKY6 102 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms