RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 LOC107984640A0A0U1RRK4 108 aa7.17□□□□□ -1.26
SF3B2-216ENST00000534765 NCBP2LA6PVI3 153 aaKnown RBP7.17□□□□□ -1.26
SF3B2-216ENST00000534765 MOSP00540 346 aa7.17□□□□□ -1.26
SF3B2-216ENST00000534765 ZNF688P0C7X2 276 aa7.17□□□□□ -1.26
SF3B2-216ENST00000534765 P0C879 139 aa7.17□□□□□ -1.26
SF3B2-216ENST00000534765 REG1BP48304 166 aa7.17□□□□□ -1.26
SF3B2-216ENST00000534765 CR1LQ2VPA4 569 aa7.17□□□□□ -1.26
SF3B2-216ENST00000534765 C5orf47Q569G3 176 aa7.17□□□□□ -1.26
SF3B2-216ENST00000534765 TEX36Q5VZQ5 186 aa7.17□□□□□ -1.26
SF3B2-216ENST00000534765 RITA1Q96K30 269 aa7.17□□□□□ -1.26
SF3B2-216ENST00000534765 AAMDCQ9H7C9 122 aa7.17□□□□□ -1.26
SF3B2-216ENST00000534765 RNF7Q9UBF6 113 aa7.17□□□□□ -1.26
SF3B2-216ENST00000534765 NAV3Q8IVL0 2385 aa7.17□□□□□ -1.26
SF3B2-216ENST00000534765 D6R8Y8 96 aa7.16□□□□□ -1.26
SF3B2-216ENST00000534765 TNFRSF1AP19438 455 aa7.16□□□□□ -1.26
SF3B2-216ENST00000534765 FBXL19-AS1Q494R0 122 aa7.16□□□□□ -1.26
SF3B2-216ENST00000534765 EDA2RQ9HAV5 297 aa7.16□□□□□ -1.26
SF3B2-216ENST00000534765 GCN1Q92616 2671 aaKnown RBP7.16□□□□□ -1.26
SF3B2-216ENST00000534765 TEX15Q9BXT5 2789 aa7.16□□□□□ -1.26
SF3B2-216ENST00000534765 TRBV25-1A0A075B6N4 114 aa7.16□□□□□ -1.26
SF3B2-216ENST00000534765 OOEPA6NGQ2 149 aa7.16□□□□□ -1.26
SF3B2-216ENST00000534765 FAM120AOSQ5T036 256 aa7.16□□□□□ -1.26
SF3B2-216ENST00000534765 CEND1Q8N111 149 aa7.16□□□□□ -1.26
SF3B2-216ENST00000534765 HBDP02042 147 aa7.16□□□□□ -1.26
SF3B2-216ENST00000534765 CIARTQ8N365 385 aaPredicted RBP7.16□□□□□ -1.26
SF3B2-216ENST00000534765 PDZD2O15018 2839 aa7.16□□□□□ -1.26
SF3B2-216ENST00000534765 USP9YO00507 2555 aaPredicted RBP7.15□□□□□ -1.26
SF3B2-216ENST00000534765 A0A1B0GUT8 65 aa7.15□□□□□ -1.26
SF3B2-216ENST00000534765 C9JAW5 83 aa7.15□□□□□ -1.26
SF3B2-216ENST00000534765 MGST3O14880 152 aa7.15□□□□□ -1.26
SF3B2-216ENST00000534765 ARMS2P0C7Q2 107 aa7.15□□□□□ -1.26
SF3B2-216ENST00000534765 C10orf113Q5VZT2 155 aa7.15□□□□□ -1.26
SF3B2-216ENST00000534765 TMEM200BQ69YZ2 307 aa7.15□□□□□ -1.26
SF3B2-216ENST00000534765 C11orf52Q96A22 123 aa7.15□□□□□ -1.26
SF3B2-216ENST00000534765 CDIP1Q9H305 208 aa7.15□□□□□ -1.26
SF3B2-216ENST00000534765 CALYQ9NYX4 217 aa7.15□□□□□ -1.26
SF3B2-216ENST00000534765 RRN3P1Q2M238 152 aa7.15□□□□□ -1.26
SF3B2-216ENST00000534765 ZNF672Q499Z4 452 aaPredicted RBP7.15□□□□□ -1.26
SF3B2-216ENST00000534765 LYRM7Q5U5X0 104 aa7.15□□□□□ -1.26
SF3B2-216ENST00000534765 TRAV4A0A0B4J268 109 aa7.15□□□□□ -1.27
SF3B2-216ENST00000534765 IGHV4-39P01824 125 aa7.15□□□□□ -1.27
SF3B2-216ENST00000534765 IGKV1-16P04430 117 aa7.15□□□□□ -1.27
SF3B2-216ENST00000534765 C15orf53Q8NAA6 179 aa7.15□□□□□ -1.27
SF3B2-216ENST00000534765 SIGLEC8Q9NYZ4 499 aa7.15□□□□□ -1.27
SF3B2-216ENST00000534765 ZNF256Q9Y2P7 627 aaPredicted RBP7.15□□□□□ -1.27
SF3B2-216ENST00000534765 SRRM4A7MD48 611 aaKnown RBP7.14□□□□□ -1.27
SF3B2-216ENST00000534765 SAA2P0DJI9 122 aaPredicted RBP7.14□□□□□ -1.27
SF3B2-216ENST00000534765 C11orf71Q6IPW1 123 aa7.14□□□□□ -1.27
SF3B2-216ENST00000534765 GOLT1AQ6ZVE7 132 aa7.14□□□□□ -1.27
SF3B2-216ENST00000534765 NRGNQ92686 78 aa7.14□□□□□ -1.27
SF3B2-216ENST00000534765 IGKV2D-26A0A0A0MRZ7 120 aa7.14□□□□□ -1.27
SF3B2-216ENST00000534765 LEPP41159 167 aa7.14□□□□□ -1.27
SF3B2-216ENST00000534765 CHCHD5Q9BSY4 110 aa7.14□□□□□ -1.27
SF3B2-216ENST00000534765 TRAV8-4A0A0B4J246 113 aa7.14□□□□□ -1.27
SF3B2-216ENST00000534765 PMS2P5A8MQ11 134 aa7.14□□□□□ -1.27
SF3B2-216ENST00000534765 IGKCP01834 107 aa7.14□□□□□ -1.27
SF3B2-216ENST00000534765 DUTP33316 252 aaKnown RBP7.14□□□□□ -1.27
SF3B2-216ENST00000534765 DLX6P56179 175 aa7.14□□□□□ -1.27
SF3B2-216ENST00000534765 AMN1Q8IY45 258 aa7.14□□□□□ -1.27
SF3B2-216ENST00000534765 ITPR2Q14571 2701 aa7.14□□□□□ -1.27
SF3B2-216ENST00000534765 TRAV40A0A0B4J280 105 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 E7EUB6 86 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 ZNF56Q15929 161 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 ZFP2Q6ZN57 461 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 ATP5L2Q7Z4Y8 100 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 TIMD4Q96H15 378 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 RASL11BQ9BPW5 248 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 LINC00312Q9Y6C7 94 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 NF1P21359 2839 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 E9PLD3 99 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 FGF6P10767 208 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 TWIST1Q15672 202 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 RAX2Q96IS3 184 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 HSPE1P61604 102 aaKnown RBP7.13□□□□□ -1.27
SF3B2-216ENST00000534765 SRSF2Q01130 221 aaKnown RBP7.13□□□□□ -1.27
SF3B2-216ENST00000534765 RUSC1-AS1Q66K80 236 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 NFE4Q86UQ8 179 aa7.13□□□□□ -1.27
SF3B2-216ENST00000534765 TMEM8BA6NDV4 472 aa7.12□□□□□ -1.27
SF3B2-216ENST00000534765 CRXO43186 299 aaPredicted RBP7.12□□□□□ -1.27
SF3B2-216ENST00000534765 CD3EP07766 207 aa7.12□□□□□ -1.27
SF3B2-216ENST00000534765 ANKRD29Q8N6D5 301 aa7.12□□□□□ -1.27
SF3B2-216ENST00000534765 IGLV2-8P01709 118 aa7.12□□□□□ -1.27
SF3B2-216ENST00000534765 HLA-DRB4P13762 266 aa7.12□□□□□ -1.27
SF3B2-216ENST00000534765 Q6ZQT7 251 aa7.12□□□□□ -1.27
SF3B2-216ENST00000534765 OR13C6PQ8NH95 151 aa7.12□□□□□ -1.27
SF3B2-216ENST00000534765 DEFB104AQ8WTQ1 72 aa7.12□□□□□ -1.27
SF3B2-216ENST00000534765 SLC25A10Q9UBX3 287 aaPredicted RBP7.12□□□□□ -1.27
SF3B2-216ENST00000534765 HLA-DRB4X5D2U9 266 aa7.12□□□□□ -1.27
SF3B2-216ENST00000534765 NIPBLQ6KC79 2804 aaeCLIP7.12□□□□□ -1.271e-6■□□□□ 10.6
SF3B2-216ENST00000534765 TRAV2A0A0B4J234 112 aa7.12□□□□□ -1.27
SF3B2-216ENST00000534765 LINC00694P0DN24 101 aa7.12□□□□□ -1.27
SF3B2-216ENST00000534765 NTN5Q8WTR8 489 aaPredicted RBP7.12□□□□□ -1.27
SF3B2-216ENST00000534765 CSDC2Q9Y534 153 aaKnown RBP7.12□□□□□ -1.27
SF3B2-216ENST00000534765 HERVK_113P61574 105 aa7.11□□□□□ -1.27
SF3B2-216ENST00000534765 MRGPRG-AS1Q2M3A8 158 aa7.11□□□□□ -1.27
SF3B2-216ENST00000534765 MORN5Q5VZ52 161 aa7.11□□□□□ -1.27
SF3B2-216ENST00000534765 AJUBAQ96IF1 538 aa7.11□□□□□ -1.27
SF3B2-216ENST00000534765 TMEM213A2RRL7 107 aa7.11□□□□□ -1.27
SF3B2-216ENST00000534765 DPM2O94777 84 aa7.11□□□□□ -1.27
SF3B2-216ENST00000534765 RBP4P02753 201 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms