RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 U3KQA8 63 aa5.59□□□□□ -1.51
CTNND1-236ENST00000533667 PTPRDP23468 1912 aa5.59□□□□□ -1.51
CTNND1-236ENST00000533667 M0QXV9 152 aa5.59□□□□□ -1.51
CTNND1-236ENST00000533667 RSPO1Q2MKA7 263 aaPredicted RBP5.59□□□□□ -1.51
CTNND1-236ENST00000533667 UNQ6494/PRO21346Q6UXR6 183 aa5.59□□□□□ -1.51
CTNND1-236ENST00000533667 SMIM2Q9BVW6 85 aa5.59□□□□□ -1.51
CTNND1-236ENST00000533667 SDHAF1A6NFY7 115 aa5.59□□□□□ -1.52
CTNND1-236ENST00000533667 SMIM9A6NGZ8 99 aa5.59□□□□□ -1.52
CTNND1-236ENST00000533667 F8VRH5 84 aa5.59□□□□□ -1.52
CTNND1-236ENST00000533667 SOCS3O14543 225 aa5.59□□□□□ -1.52
CTNND1-236ENST00000533667 CDK2AP2O75956 126 aa5.59□□□□□ -1.52
CTNND1-236ENST00000533667 PRR31Q5SQ13 230 aa5.59□□□□□ -1.52
CTNND1-236ENST00000533667 FXYD5Q96DB9 178 aa5.59□□□□□ -1.52
CTNND1-236ENST00000533667 LENEPQ9Y5L5 61 aa5.59□□□□□ -1.52
CTNND1-236ENST00000533667 TSC2P49815 1807 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 HAPLN4Q86UW8 402 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 UBE2DNLQ8IWF7 75 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 UBE2E2Q96LR5 201 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 DKK1O94907 266 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 LTAP01374 205 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 IGHG4P01861 327 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 PRB4P10163 310 aaPredicted RBP5.58□□□□□ -1.52
CTNND1-236ENST00000533667 GVINP1Q7Z2Y8 2422 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 RBAKDNA6NC62 111 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 BRK1Q8WUW1 75 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 PKIGQ9Y2B9 76 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 AKAP6Q13023 2319 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 PI4KAP42356 2102 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 HEATR1Q9H583 2144 aaKnown RBP5.58□□□□□ -1.52
CTNND1-236ENST00000533667 VPREB1P12018 145 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 KLF5Q13887 457 aaPredicted RBP5.58□□□□□ -1.52
CTNND1-236ENST00000533667 RBMY1FQ15415 496 aaKnown RBP5.58□□□□□ -1.52
CTNND1-236ENST00000533667 MCRIP2Q9BUT9 160 aaKnown RBP5.58□□□□□ -1.52
CTNND1-236ENST00000533667 MED12Q93074 2177 aa5.58□□□□□ -1.52
CTNND1-236ENST00000533667 PRSS29PA6NIE9 313 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 IGLL1P15814 213 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 PRSS57Q6UWY2 283 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 ZNRD1Q9P1U0 126 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 VOPP1Q96AW1 172 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 PLXNA2O75051 1894 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 PHF3Q92576 2039 aaKnown RBP5.57□□□□□ -1.52
CTNND1-236ENST00000533667 TRAV25A0A0B4J276 109 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 ELANEP08246 267 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 SEC61GP60059 68 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 ANXA2RQ3ZCQ2 193 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 CDPF1Q6NVV7 123 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 Q6ZSR3 168 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 TMEM243Q9BU79 118 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 INS-IGF2F8WCM5 200 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 MRPL23Q16540 153 aaKnown RBP5.57□□□□□ -1.52
CTNND1-236ENST00000533667 ZNF493Q6ZR52 646 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 ZC2HC1AQ96GY0 325 aa5.57□□□□□ -1.52
CTNND1-236ENST00000533667 A0A1B0GUS0 222 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 LY6HO94772 140 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 ZNF134P52741 427 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 HERVK_113P63121 156 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 SPINK13Q1W4C9 94 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 PRO1854Q9UHT4 67 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 CNOT1A5YKK6 2376 aaKnown RBP5.56□□□□□ -1.52
CTNND1-236ENST00000533667 KIAA2026Q5HYC2 2103 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 IGHV7-4-1A0A0J9YVY3 117 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 ZNF503-AS2A6NEH8 195 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 H3BMG7 143 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 RHOHQ15669 191 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 RUSC1-AS1Q66K80 236 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 CEND1Q8N111 149 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 NDUFA12Q9UI09 145 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 TRAV13-2A0A0B4J235 113 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 G3V318 75 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 UQCRQO14949 82 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 NPYP01303 97 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 ZNF491Q8N8L2 437 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 HLA-DMBP28068 263 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 NDUFV3P56181 108 aaKnown RBP5.56□□□□□ -1.52
CTNND1-236ENST00000533667 PLA2G2CQ5R387 149 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 LINC01545Q5VT33 79 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 RNF138Q8WVD3 245 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 MRPL35Q9NZE8 188 aaKnown RBP5.56□□□□□ -1.52
CTNND1-236ENST00000533667 U3KQE9 123 aa5.56□□□□□ -1.52
CTNND1-236ENST00000533667 EP300Q09472 2414 aaPredicted RBP5.55□□□□□ -1.52
CTNND1-236ENST00000533667 WIPF3A6NGB9 483 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 DEFB130BP0DP73 79 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 DEFB130AP0DP74 79 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 SELENOKQ9Y6D0 94 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 NLRC5Q86WI3 1866 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 SPTBN1Q01082 2364 aaKnown RBP5.55□□□□□ -1.52
CTNND1-236ENST00000533667 ZNF561-AS1K7EIQ3 104 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 PSCAO43653 123 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 ZNF524Q96C55 264 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 XCL2Q9UBD3 114 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 TAX1BP3O14907 124 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 TCF15Q12870 199 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 FOXI1Q12951 378 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 UBL5Q9BZL1 73 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 FANCMQ8IYD8 2048 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 J3QQQ9 107 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 WISP1O95388 367 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 DAD1P61803 113 aa5.55□□□□□ -1.52
CTNND1-236ENST00000533667 FAM240AA0A1B0GVK7 77 aa5.54□□□□□ -1.52
CTNND1-236ENST00000533667 SHISA9B4DS77 424 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms