RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 Q9UFV3 132 aa5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 WIPF2Q8TF74 440 aaPredicted RBP5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 RIF1Q5UIP0 2472 aaKnown RBP5.59□□□□□ -1.51
TGFBR3-210ENST00000533089 LY6G6EA0A0G2JKS1 128 aa5.59□□□□□ -1.52
TGFBR3-210ENST00000533089 ZNF497Q6ZNH5 498 aa5.59□□□□□ -1.52
TGFBR3-210ENST00000533089 U3KQA8 63 aa5.59□□□□□ -1.52
TGFBR3-210ENST00000533089 IGLV3-32A0A0A0MS00 114 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 TRBV10-2A0A0K0K1G8 114 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 OVOL1O14753 267 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 LTAP01374 205 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 PMAIP1Q13794 54 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 TMEM14EPQ6UXP3 125 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 EXOC3-AS1Q8N2X6 119 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 DOCK6Q96HP0 2047 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 CACNA1HO95180 2353 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 TRAV23DV6A0A075B6W5 121 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 IGKV2-40A0A087WW87 121 aaPredicted RBP5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 RHODO00212 210 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 SH2D1AO60880 128 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 IGKV2D-40P01614 121 aaPredicted RBP5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 SEC16AO15027 2179 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 TCL1BO95988 128 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 IGLV2-23P01705 113 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 INSL3P51460 131 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 TMEM200BQ69YZ2 307 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 TSC2P49815 1807 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 CACNA1EQ15878 2313 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 IGHV4-4A0A075B6R2 117 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 DSCR8Q96T75 97 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 PDCD11Q14690 1871 aaKnown RBP5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 LRCOL1A6NCL2 159 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 DEFB130BP0DP73 79 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 DEFB130AP0DP74 79 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 Q0VFX4 171 aa5.58□□□□□ -1.52
TGFBR3-210ENST00000533089 LY6HO94772 140 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 LYZL4Q96KX0 146 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 Q96MF0 132 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 HIGD1BQ9P298 99 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 ANKRD36A6QL64 1941 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 FRMPD3Q5JV73 1810 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 IGHV1OR15-1A0A075B7D0 117 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 TEX49A0A1B0GTD5 131 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 GATA3P23771 443 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 FGFBP3Q8TAT2 258 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 IGHG3P01860 377 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 SDIM1Q6ZPB5 146 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 ANAPC10Q9UM13 185 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 K7ENP7 123 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 COX7CP15954 63 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 MRPL51Q4U2R6 128 aaKnown RBP5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 Q8N8P6 123 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 FAM90A9PA6NNJ1 464 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 IGHV1-8P0DP01 117 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 BPESC1Q9GZL8 116 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 MPDZO75970 2070 aa5.57□□□□□ -1.52
TGFBR3-210ENST00000533089 IGHV1-3A0A0C4DH29 117 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 F8VRH5 84 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 TMEM178BH3BS89 294 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 EGR2P11161 476 aaPredicted RBP5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 C10orf55Q5SWW7 151 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 PLA2G2EQ9NZK7 142 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 ICOSQ9Y6W8 199 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 THAP8Q8NA92 274 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 ANK1P16157 1881 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 RPL36AP83881 106 aaKnown RBP5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 IGF2-ASQ6U949 168 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 RPL36ALQ969Q0 106 aaKnown RBP5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 CTRLP40313 264 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 SRRM4A7MD48 611 aaKnown RBP5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 J3QKU1 62 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 FUSP35637 526 aaKnown RBP eCLIP5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 PRCDQ00LT1 54 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 RUSC1-AS1Q66K80 236 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 DTX1Q86Y01 620 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 ESPL1Q14674 2120 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 THADAQ6YHU6 1953 aa5.56□□□□□ -1.52
TGFBR3-210ENST00000533089 WISP1O95388 367 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 ZNF876PQ49A33 203 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 PRIMA1Q86XR5 153 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 KLK5Q9Y337 293 aaPredicted RBP5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 LTBP2Q14767 1821 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 A0A0G2JRQ6 117 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 E9PLD3 99 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 IGKV1-5P01602 117 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 MINOS1Q5TGZ0 78 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 Q6ZS92 163 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 GTSF1Q8WW33 167 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 RASL10AQ92737 203 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 MINOS1-NBL1R4GNA1 71 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 RTTNQ86VV8 2226 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 ARHGEF17Q96PE2 2063 aaPredicted RBP5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 SMIM26A0A096LP01 95 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 J3QQQ9 107 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 TIMM17AQ99595 171 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 TP53TG1Q9Y2A0 90 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 IGHV4-28A0A0C4DH34 117 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 PMS2P5A8MQ11 134 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 TRBV12-3P01733 135 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 COL8A2P25067 703 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 C2orf66Q6UXQ4 117 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms