RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 MIR17HGQ75NE6 70 aa8.69□□□□□ -1.02
CAPN1-223ENST00000533079 CYB561D1Q8N8Q1 229 aa8.69□□□□□ -1.02
CAPN1-223ENST00000533079 CLRN3Q8NCR9 226 aa8.69□□□□□ -1.02
CAPN1-223ENST00000533079 OR51G1Q8NGK1 321 aa8.69□□□□□ -1.02
CAPN1-223ENST00000533079 FAM167A-AS1Q96KT0 104 aa8.69□□□□□ -1.02
CAPN1-223ENST00000533079 TMEM208Q9BTX3 173 aa8.69□□□□□ -1.02
CAPN1-223ENST00000533079 NKX6-2Q9C056 277 aaPredicted RBP8.69□□□□□ -1.02
CAPN1-223ENST00000533079 A0A1W2PRE2 83 aa8.68□□□□□ -1.02
CAPN1-223ENST00000533079 SOCS3O14543 225 aa8.68□□□□□ -1.02
CAPN1-223ENST00000533079 PAGE4O60829 102 aa8.68□□□□□ -1.02
CAPN1-223ENST00000533079 ATP5G1P05496 136 aa8.68□□□□□ -1.02
CAPN1-223ENST00000533079 PSG1P11464 419 aa8.68□□□□□ -1.02
CAPN1-223ENST00000533079 ATP5G3P48201 142 aa8.68□□□□□ -1.02
CAPN1-223ENST00000533079 PNRC1Q12796 327 aaPredicted RBP8.68□□□□□ -1.02
CAPN1-223ENST00000533079 ATRAIDQ6UW56 229 aa8.68□□□□□ -1.02
CAPN1-223ENST00000533079 LYPD1Q8N2G4 141 aa8.68□□□□□ -1.02
CAPN1-223ENST00000533079 FRZBQ92765 325 aa8.68□□□□□ -1.02
CAPN1-223ENST00000533079 IGF2BP2-AS1Q96M15 143 aa8.68□□□□□ -1.02
CAPN1-223ENST00000533079 Q9H8V8 135 aa8.68□□□□□ -1.02
CAPN1-223ENST00000533079 RNF24Q9Y225 148 aa8.68□□□□□ -1.02
CAPN1-223ENST00000533079 A0A0J9YX75 114 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 FAM74A7A6NL05 159 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 A8MTW9 85 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 B4DEV8 164 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 F5H768 121 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 ISLRO14498 428 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 S100A7P31151 101 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 RHEBQ15382 184 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 C1orf194Q5T5A4 169 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 Q5VSD8 79 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 CDPF1Q6NVV7 123 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 RNF125Q96EQ8 232 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 TVP23CQ96ET8 276 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 ZNF503Q96F45 646 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 TCEAL7Q9BRU2 100 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 UPK3BQ9BT76 320 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 TMEM14CQ9P0S9 112 aa8.67□□□□□ -1.02
CAPN1-223ENST00000533079 H3BQ15 152 aa8.66□□□□□ -1.02
CAPN1-223ENST00000533079 INSP01308 110 aa8.66□□□□□ -1.02
CAPN1-223ENST00000533079 MEOX2P50222 304 aa8.66□□□□□ -1.02
CAPN1-223ENST00000533079 LINC00305Q7Z4B0 112 aa8.66□□□□□ -1.02
CAPN1-223ENST00000533079 C11orf52Q96A22 123 aa8.66□□□□□ -1.02
CAPN1-223ENST00000533079 SLC25A2Q9BXI2 301 aa8.66□□□□□ -1.02
CAPN1-223ENST00000533079 OR51M1Q9H341 326 aa8.66□□□□□ -1.02
CAPN1-223ENST00000533079 DOK5Q9P104 306 aa8.66□□□□□ -1.02
CAPN1-223ENST00000533079 HIGD1AQ9Y241 93 aa8.66□□□□□ -1.02
CAPN1-223ENST00000533079 A0A087WWC5 75 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 CBY3A6NI87 242 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 EIF3GO75821 320 aaKnown RBP eCLIP8.65□□□□□ -1.02
CAPN1-223ENST00000533079 SCO1O75880 301 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 DEFB130BP0DP73 79 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 DEFB130AP0DP74 79 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 ORM2P19652 201 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 DEFB1P60022 68 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 BTN1A1Q13410 526 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 IQCF2Q8IXL9 164 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 OR1B1Q8NGR6 318 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 RPUSD4Q96CM3 377 aaKnown RBP8.65□□□□□ -1.02
CAPN1-223ENST00000533079 UHRF2Q96PU4 802 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 PAXXQ9BUH6 204 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 KRTAP1-5Q9BYS1 174 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 SDF2L1Q9HCN8 221 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 TMEM242Q9NWH2 141 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 PGPEP1Q9NXJ5 209 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 PRELID1Q9Y255 219 aa8.65□□□□□ -1.02
CAPN1-223ENST00000533079 C7orf77A4D0Y5 90 aa8.64□□□□□ -1.03
CAPN1-223ENST00000533079 ZNF727A8MUV8 499 aa8.64□□□□□ -1.03
CAPN1-223ENST00000533079 OR7C2O60412 319 aa8.64□□□□□ -1.03
CAPN1-223ENST00000533079 TMEM241Q24JQ0 296 aa8.64□□□□□ -1.03
CAPN1-223ENST00000533079 CST9LP1Q5W188 147 aa8.64□□□□□ -1.03
CAPN1-223ENST00000533079 AMTNQ6UX39 209 aa8.64□□□□□ -1.03
CAPN1-223ENST00000533079 C18orf15Q96N68 181 aa8.64□□□□□ -1.03
CAPN1-223ENST00000533079 SHANK2-AS3Q9BTD1 123 aa8.64□□□□□ -1.03
CAPN1-223ENST00000533079 SMCO4Q9NRQ5 59 aa8.64□□□□□ -1.03
CAPN1-223ENST00000533079 NAT8Q9UHE5 227 aa8.64□□□□□ -1.03
CAPN1-223ENST00000533079 LY96Q9Y6Y9 160 aa8.64□□□□□ -1.03
CAPN1-223ENST00000533079 TRAV5A0A0B4J249 113 aa8.63□□□□□ -1.03
CAPN1-223ENST00000533079 F6UB75 175 aa8.63□□□□□ -1.03
CAPN1-223ENST00000533079 M0R036 132 aa8.63□□□□□ -1.03
CAPN1-223ENST00000533079 EREGO14944 169 aa8.63□□□□□ -1.03
CAPN1-223ENST00000533079 MORN5Q5VZ52 161 aa8.63□□□□□ -1.03
CAPN1-223ENST00000533079 FXYD5Q96DB9 178 aa8.63□□□□□ -1.03
CAPN1-223ENST00000533079 SMIM7Q9BQ49 75 aa8.63□□□□□ -1.03
CAPN1-223ENST00000533079 SLC25A39Q9BZJ4 359 aaPredicted RBP8.63□□□□□ -1.03
CAPN1-223ENST00000533079 FAT1Q14517 4588 aa8.63□□□□□ -1.03
CAPN1-223ENST00000533079 PLAC8L1A1L4L8 177 aa8.62□□□□□ -1.03
CAPN1-223ENST00000533079 H3BRN7 92 aa8.62□□□□□ -1.03
CAPN1-223ENST00000533079 DUSP14O95147 198 aaKnown RBP8.62□□□□□ -1.03
CAPN1-223ENST00000533079 HIST1H1EP10412 219 aaKnown RBP8.62□□□□□ -1.03
CAPN1-223ENST00000533079 XGP55808 180 aa8.62□□□□□ -1.03
CAPN1-223ENST00000533079 UBE2G2P60604 165 aa8.62□□□□□ -1.03
CAPN1-223ENST00000533079 LYZP61626 148 aa8.62□□□□□ -1.03
CAPN1-223ENST00000533079 TMEM256Q8N2U0 113 aa8.62□□□□□ -1.03
CAPN1-223ENST00000533079 OR10J6PQ8NGY7 276 aa8.62□□□□□ -1.03
CAPN1-223ENST00000533079 C16orf74Q96GX8 76 aa8.62□□□□□ -1.03
CAPN1-223ENST00000533079 CTDSP1Q9GZU7 261 aa8.62□□□□□ -1.03
CAPN1-223ENST00000533079 PARLQ9H300 379 aa8.62□□□□□ -1.03
CAPN1-223ENST00000533079 ZNF705GA8MUZ8 300 aaPredicted RBP8.61□□□□□ -1.03
CAPN1-223ENST00000533079 C9JCJ5 164 aa8.61□□□□□ -1.03
CAPN1-223ENST00000533079 CRXO43186 299 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms