RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 CSNK1G2-AS1Q8NCQ2 148 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 BTF3L4Q96K17 158 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 IGF2BP2-AS1Q96M15 143 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 SMIM7Q9BQ49 75 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 TCEAL7Q9BRU2 100 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 RETNQ9HD89 108 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 TMEM242Q9NWH2 141 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 ZNF492Q9P255 531 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 U3KQK5 164 aa8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 HUWE1Q7Z6Z7 4374 aaKnown RBP8.2□□□□□ -1.1
TRAPPC4-211ENST00000533012 C11orf94C9JXX5 98 aa8.19□□□□□ -1.1
TRAPPC4-211ENST00000533012 RAB5BP61020 215 aa8.19□□□□□ -1.1
TRAPPC4-211ENST00000533012 TMEM241Q24JQ0 296 aa8.19□□□□□ -1.1
TRAPPC4-211ENST00000533012 TMEM88Q6PEY1 159 aa8.19□□□□□ -1.1
TRAPPC4-211ENST00000533012 CBLN2Q8IUK8 224 aa8.19□□□□□ -1.1
TRAPPC4-211ENST00000533012 OR11H2Q8NH07 326 aa8.19□□□□□ -1.1
TRAPPC4-211ENST00000533012 HIST1H2BAQ96A08 127 aa8.19□□□□□ -1.1
TRAPPC4-211ENST00000533012 GOLT1BQ9Y3E0 138 aa8.19□□□□□ -1.1
TRAPPC4-211ENST00000533012 TRAV12-2A0A075B6T6 113 aa8.18□□□□□ -1.1
TRAPPC4-211ENST00000533012 FBLL1A6NHQ2 334 aaKnown RBP8.18□□□□□ -1.1
TRAPPC4-211ENST00000533012 C1orf196B1AJZ1 125 aa8.18□□□□□ -1.1
TRAPPC4-211ENST00000533012 INSP01308 110 aa8.18□□□□□ -1.1
TRAPPC4-211ENST00000533012 ATG101Q9BSB4 218 aa8.18□□□□□ -1.1
TRAPPC4-211ENST00000533012 TMEM208Q9BTX3 173 aa8.18□□□□□ -1.1
TRAPPC4-211ENST00000533012 LENEPQ9Y5L5 61 aa8.18□□□□□ -1.1
TRAPPC4-211ENST00000533012 IGHV3OR16-12A0A075B7B8 117 aa8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 TRBV7-9A0A0J9YWB2 115 aa8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 J3KRW8 73 aa8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 PEX7O00628 323 aa8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 PPP1R2P9O14990 202 aa8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 CRXO43186 299 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 GPX1P07203 203 aa8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 S100PP25815 95 aa8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 ATP5G3P48201 142 aa8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 C1orf158Q8N1D5 194 aa8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 Q8TAT8 98 aa8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 ANAPC16Q96DE5 110 aa8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 FAM19A4Q96LR4 140 aa8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 SDF2L1Q9HCN8 221 aa8.17□□□□□ -1.1
TRAPPC4-211ENST00000533012 TRAV8-1A0A0A6YYK1 113 aa8.16□□□□□ -1.1
TRAPPC4-211ENST00000533012 SMIM9A6NGZ8 99 aa8.16□□□□□ -1.1
TRAPPC4-211ENST00000533012 CRISP2P16562 243 aa8.16□□□□□ -1.1
TRAPPC4-211ENST00000533012 RNASE4P34096 147 aaKnown RBP8.16□□□□□ -1.1
TRAPPC4-211ENST00000533012 ZNF705AQ6ZN79 300 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC4-211ENST00000533012 SGK494Q96LW2 274 aa8.16□□□□□ -1.1
TRAPPC4-211ENST00000533012 LINC01587Q99440 93 aa8.16□□□□□ -1.1
TRAPPC4-211ENST00000533012 C20orf144Q9BQM9 153 aa8.16□□□□□ -1.1
TRAPPC4-211ENST00000533012 NDFIP1Q9BT67 221 aa8.16□□□□□ -1.1
TRAPPC4-211ENST00000533012 PARLQ9H300 379 aa8.16□□□□□ -1.1
TRAPPC4-211ENST00000533012 PSG8Q9UQ74 426 aa8.16□□□□□ -1.1
TRAPPC4-211ENST00000533012 NBEAL2Q6ZNJ1 2754 aa8.16□□□□□ -1.1
TRAPPC4-211ENST00000533012 AGRNO00468 2067 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 TRAV12-3A0A0B4J271 114 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 C7orf71A4D174 169 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 KLLNB2CW77 178 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 MIFP14174 115 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 RPL19P84098 196 aaKnown RBP8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 KIR3DS1Q14943 382 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 ZNF674Q2M3X9 581 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 SAPCD1Q5SSQ6 148 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 GFI1BQ5VTD9 330 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 PRNTQ86SH4 94 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 TMEM256Q8N2U0 113 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 ZFAND2AQ8N6M9 145 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 TMEM75Q8N9X5 138 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 LINC00479Q96M42 142 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 NEU1Q99519 415 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 LY96Q9Y6Y9 160 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 X6R8D5 127 aa8.15□□□□□ -1.1
TRAPPC4-211ENST00000533012 TRAV34A0A0B4J273 112 aa8.14□□□□□ -1.11
TRAPPC4-211ENST00000533012 COLCA2A8K830 154 aa8.14□□□□□ -1.11
TRAPPC4-211ENST00000533012 H7BYZ3 331 aa8.14□□□□□ -1.11
TRAPPC4-211ENST00000533012 IGLV2-11P01706 119 aa8.14□□□□□ -1.11
TRAPPC4-211ENST00000533012 S100A9P06702 114 aaKnown RBP8.14□□□□□ -1.11
TRAPPC4-211ENST00000533012 AKR1C3P42330 323 aa8.14□□□□□ -1.11
TRAPPC4-211ENST00000533012 UBE2G1P62253 170 aa8.14□□□□□ -1.11
TRAPPC4-211ENST00000533012 ADIRFQ15847 76 aa8.14□□□□□ -1.11
TRAPPC4-211ENST00000533012 KCNIP4Q6PIL6 250 aa8.14□□□□□ -1.11
TRAPPC4-211ENST00000533012 FMC1Q96HJ9 113 aa8.14□□□□□ -1.11
TRAPPC4-211ENST00000533012 BIN3Q9NQY0 253 aa8.14□□□□□ -1.11
TRAPPC4-211ENST00000533012 KLF12Q9Y4X4 402 aa8.14□□□□□ -1.11
TRAPPC4-211ENST00000533012 LOC105371267A0A1B0GV96 52 aa8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 SCO2A0A1W2PP80 73 aa8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 ZNF324O75467 553 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 S100A6P06703 90 aa8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 RBMY1A1P0DJD3 496 aaKnown RBP8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 RBMY1CP0DJD4 496 aa8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 HTN1P15515 57 aa8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 RAB5AP20339 215 aa8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 TAS2R60P59551 318 aa8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 RBMY1FQ15415 496 aaKnown RBP8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 TMEM183BQ1AE95 376 aa8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 RRN3P1Q2M238 152 aa8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 C11orf52Q96A22 123 aa8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 ZFP30Q9Y2G7 519 aa8.13□□□□□ -1.11
TRAPPC4-211ENST00000533012 COL7A1Q02388 2944 aa8.12□□□□□ -1.11
TRAPPC4-211ENST00000533012 IGHV4-28A0A0C4DH34 117 aa8.12□□□□□ -1.11
TRAPPC4-211ENST00000533012 A0A0J9YWU9 116 aa8.12□□□□□ -1.11
TRAPPC4-211ENST00000533012 TRBV6-1A0A0K0K1D8 114 aa8.12□□□□□ -1.11
TRAPPC4-211ENST00000533012 ZNF705GA8MUZ8 300 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms