RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 TRAV12-1A0A0B4J245 112 aa6.76□□□□□ -1.33
CTNND1-221ENST00000529873 J3QKU1 62 aa6.76□□□□□ -1.33
CTNND1-221ENST00000529873 IGKV1-39P01597 117 aa6.76□□□□□ -1.33
CTNND1-221ENST00000529873 IGKV1D-39P04432 117 aa6.76□□□□□ -1.33
CTNND1-221ENST00000529873 MRPL51Q4U2R6 128 aaKnown RBP6.76□□□□□ -1.33
CTNND1-221ENST00000529873 PIP4P1Q86T03 277 aa6.76□□□□□ -1.33
CTNND1-221ENST00000529873 RNF183Q96D59 192 aa6.76□□□□□ -1.33
CTNND1-221ENST00000529873 FAM231DQ6ZW35 169 aa6.76□□□□□ -1.33
CTNND1-221ENST00000529873 RETNQ9HD89 108 aa6.76□□□□□ -1.33
CTNND1-221ENST00000529873 PRO1854Q9UHT4 67 aa6.76□□□□□ -1.33
CTNND1-221ENST00000529873 IGHG2P01859 326 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 TPSG1Q9NRR2 321 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 KNL1Q8NG31 2342 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 F6UB75 175 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 KLF5Q13887 457 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-221ENST00000529873 SCRT2Q9NQ03 307 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 ATOX1O00244 68 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 IGLV3-1P01715 115 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 HLA-DMBP28068 263 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 CYYR1Q96J86 154 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 C1orf147Q96MC9 270 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-221ENST00000529873 FAM215AQ9Y5M1 114 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 V9GYV3 84 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 RP1L1Q8IWN7 2480 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-221ENST00000529873 TRAV26-2A0A0B4J265 109 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 WISP1O95388 367 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 C18orf32Q8TCD1 76 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 KIR2DL5BA0A0G2JN68 375 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 KIR2DL5BA0A0G2JPC4 375 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 C2orf66Q6UXQ4 117 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 KIR2DL5AQ8N109 375 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 PRSS33Q8NF86 280 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 RMI2Q96E14 147 aa6.75□□□□□ -1.33
CTNND1-221ENST00000529873 SHISA9B4DS77 424 aa6.74□□□□□ -1.33
CTNND1-221ENST00000529873 PRR25Q96S07 402 aa6.74□□□□□ -1.33
CTNND1-221ENST00000529873 TRAV12-2A0A075B6T6 113 aa6.74□□□□□ -1.33
CTNND1-221ENST00000529873 IGLC7A0M8Q6 106 aa6.74□□□□□ -1.33
CTNND1-221ENST00000529873 ELANEP08246 267 aa6.74□□□□□ -1.33
CTNND1-221ENST00000529873 KAAG1Q9UBP8 84 aa6.74□□□□□ -1.33
CTNND1-221ENST00000529873 MAP1BP46821 2468 aaKnown RBP6.74□□□□□ -1.33
CTNND1-221ENST00000529873 PTPRDP23468 1912 aa6.74□□□□□ -1.33
CTNND1-221ENST00000529873 VOPP1Q96AW1 172 aa6.74□□□□□ -1.33
CTNND1-221ENST00000529873 K7EM74 188 aa6.74□□□□□ -1.33
CTNND1-221ENST00000529873 LRRC75A-AS1Q8N1F1 130 aa6.74□□□□□ -1.33
CTNND1-221ENST00000529873 FXYD5Q96DB9 178 aa6.74□□□□□ -1.33
CTNND1-221ENST00000529873 LTAP01374 205 aa6.73□□□□□ -1.33
CTNND1-221ENST00000529873 ZC2HC1AQ96GY0 325 aa6.73□□□□□ -1.33
CTNND1-221ENST00000529873 WT1-ASQ06250 92 aa6.73□□□□□ -1.33
CTNND1-221ENST00000529873 DIAPH2-AS1Q14236 149 aa6.73□□□□□ -1.33
CTNND1-221ENST00000529873 BVES-AS1Q5T3Y7 98 aa6.73□□□□□ -1.33
CTNND1-221ENST00000529873 ZNRF2Q8NHG8 242 aa6.73□□□□□ -1.33
CTNND1-221ENST00000529873 SMIM9A6NGZ8 99 aa6.73□□□□□ -1.33
CTNND1-221ENST00000529873 FOXI2Q6ZQN5 318 aa6.73□□□□□ -1.33
CTNND1-221ENST00000529873 ZNF524Q96C55 264 aa6.73□□□□□ -1.33
CTNND1-221ENST00000529873 MRPL53Q96EL3 112 aaKnown RBP6.73□□□□□ -1.33
CTNND1-221ENST00000529873 RBAKDNA6NC62 111 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 C10orf91Q5T1B1 145 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 UNC13CQ8NB66 2214 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 VWC2Q2TAL6 325 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 PYGO2Q9BRQ0 406 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 IGHV3-38A0A0C4DH36 116 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 A0A0U1RQV1 116 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 SDHAF1A6NFY7 115 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 ATP5G1P05496 136 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 COX8AP10176 69 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 HLA-DRB4P13762 266 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 KRTAP27-1Q3LI81 207 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 HLA-DRB4X5D2U9 266 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 TINCRA0A1B0GVN0 87 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 FUSP35637 526 aaKnown RBP eCLIP6.72□□□□□ -1.33
CTNND1-221ENST00000529873 CEND1Q8N111 149 aa6.72□□□□□ -1.33
CTNND1-221ENST00000529873 TEX48A0A1B0GUV7 120 aa6.71□□□□□ -1.33
CTNND1-221ENST00000529873 H3BQ85 93 aa6.71□□□□□ -1.33
CTNND1-221ENST00000529873 HERVK_113P63121 156 aa6.71□□□□□ -1.33
CTNND1-221ENST00000529873 LGALS9BQ3B8N2 356 aa6.71□□□□□ -1.33
CTNND1-221ENST00000529873 LGALS9CQ6DKI2 356 aa6.71□□□□□ -1.33
CTNND1-221ENST00000529873 VPREB3Q9UKI3 123 aa6.71□□□□□ -1.33
CTNND1-221ENST00000529873 A0A1B0GX51 115 aa6.71□□□□□ -1.33
CTNND1-221ENST00000529873 C9JQL5 133 aa6.71□□□□□ -1.33
CTNND1-221ENST00000529873 NDUFB1O75438 58 aa6.71□□□□□ -1.33
CTNND1-221ENST00000529873 IGLC1P0CG04 106 aa6.71□□□□□ -1.33
CTNND1-221ENST00000529873 PFN2P35080 140 aa6.71□□□□□ -1.33
CTNND1-221ENST00000529873 ORMDL1Q9P0S3 153 aa6.71□□□□□ -1.33
CTNND1-221ENST00000529873 RSPO1Q2MKA7 263 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-221ENST00000529873 C20orf78Q9BR46 151 aa6.71□□□□□ -1.34
CTNND1-221ENST00000529873 NDUFA12Q9UI09 145 aa6.71□□□□□ -1.34
CTNND1-221ENST00000529873 DEFB125Q8N687 156 aa6.71□□□□□ -1.34
CTNND1-221ENST00000529873 NTN5Q8WTR8 489 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-221ENST00000529873 SIGLEC8Q9NYZ4 499 aa6.71□□□□□ -1.34
CTNND1-221ENST00000529873 CENPVL3A0A0U1RRI6 287 aa6.71□□□□□ -1.34
CTNND1-221ENST00000529873 FAM240AA0A1B0GVK7 77 aa6.71□□□□□ -1.34
CTNND1-221ENST00000529873 IGF2-ASQ6U949 168 aa6.71□□□□□ -1.34
CTNND1-221ENST00000529873 NPBQ8NG41 125 aa6.71□□□□□ -1.34
CTNND1-221ENST00000529873 HELZP42694 1942 aaKnown RBP6.7□□□□□ -1.34
CTNND1-221ENST00000529873 CRYGCP07315 174 aa6.7□□□□□ -1.34
CTNND1-221ENST00000529873 PSMB8P28062 276 aa6.7□□□□□ -1.34
CTNND1-221ENST00000529873 TCF20Q9UGU0 1960 aaKnown RBP6.7□□□□□ -1.34
CTNND1-221ENST00000529873 TAX1BP3O14907 124 aa6.7□□□□□ -1.34
CTNND1-221ENST00000529873 ZMAT4Q9H898 229 aa6.7□□□□□ -1.34
CTNND1-221ENST00000529873 DEFB112Q30KQ8 113 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms