RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 COX8CQ7Z4L0 72 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 EIF4E3Q8N5X7 224 aaKnown RBP5.82□□□□□ -1.48
SSBP3-211ENST00000528787 IL17DQ8TAD2 202 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 C2CD4CQ8TF44 421 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 FAM19A4Q96LR4 140 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 CITED4Q96RK1 184 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 LINC01587Q99440 93 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 RARRES2Q99969 163 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 SMIM7Q9BQ49 75 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 LINC00467Q9BRT7 94 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 WFDC10AQ9H1F0 79 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 XCL2Q9UBD3 114 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 LINC00862A6NCI5 91 aa5.81□□□□□ -1.48
SSBP3-211ENST00000528787 M0R2Z0 102 aa5.81□□□□□ -1.48
SSBP3-211ENST00000528787 RNASE4P34096 147 aaKnown RBP5.81□□□□□ -1.48
SSBP3-211ENST00000528787 IFITM2Q01629 132 aa5.81□□□□□ -1.48
SSBP3-211ENST00000528787 ERCC8Q13216 396 aa5.81□□□□□ -1.48
SSBP3-211ENST00000528787 ZNF124Q15973 351 aa5.81□□□□□ -1.48
SSBP3-211ENST00000528787 TMEM241Q24JQ0 296 aa5.81□□□□□ -1.48
SSBP3-211ENST00000528787 C15orf54Q8N8G6 183 aa5.81□□□□□ -1.48
SSBP3-211ENST00000528787 C16orf74Q96GX8 76 aa5.81□□□□□ -1.48
SSBP3-211ENST00000528787 TM2D3Q9BRN9 247 aa5.81□□□□□ -1.48
SSBP3-211ENST00000528787 NDUFAF3Q9BU61 184 aa5.81□□□□□ -1.48
SSBP3-211ENST00000528787 PARLQ9H300 379 aa5.81□□□□□ -1.48
SSBP3-211ENST00000528787 SDF2L1Q9HCN8 221 aa5.81□□□□□ -1.48
SSBP3-211ENST00000528787 NAT8Q9UHE5 227 aa5.81□□□□□ -1.48
SSBP3-211ENST00000528787 SNURFLB1AK76 121 aa5.8□□□□□ -1.48
SSBP3-211ENST00000528787 GCGP01275 180 aa5.8□□□□□ -1.48
SSBP3-211ENST00000528787 IGLV2-11P01706 119 aa5.8□□□□□ -1.48
SSBP3-211ENST00000528787 SRP19P09132 144 aaKnown RBP5.8□□□□□ -1.48
SSBP3-211ENST00000528787 ZNF705DP0CH99 300 aaPredicted RBP5.8□□□□□ -1.48
SSBP3-211ENST00000528787 ZNF705BP0CI00 300 aaPredicted RBP5.8□□□□□ -1.48
SSBP3-211ENST00000528787 CEBPGP53567 150 aa5.8□□□□□ -1.48
SSBP3-211ENST00000528787 RPL19P84098 196 aaKnown RBP5.8□□□□□ -1.48
SSBP3-211ENST00000528787 ZNF674Q2M3X9 581 aa5.8□□□□□ -1.48
SSBP3-211ENST00000528787 DEFB135Q30KP9 77 aa5.8□□□□□ -1.48
SSBP3-211ENST00000528787 TDRG1Q3Y452 100 aa5.8□□□□□ -1.48
SSBP3-211ENST00000528787 ANXA2RQ3ZCQ2 193 aa5.8□□□□□ -1.48
SSBP3-211ENST00000528787 CENPWQ5EE01 88 aa5.8□□□□□ -1.48
SSBP3-211ENST00000528787 IBA57Q5T440 356 aaKnown RBP5.8□□□□□ -1.48
SSBP3-211ENST00000528787 GFI1BQ5VTD9 330 aa5.8□□□□□ -1.48
SSBP3-211ENST00000528787 ZNF705AQ6ZN79 300 aaPredicted RBP5.8□□□□□ -1.48
SSBP3-211ENST00000528787 OR11H2Q8NH07 326 aa5.8□□□□□ -1.48
SSBP3-211ENST00000528787 Q8TAT8 98 aa5.8□□□□□ -1.48
SSBP3-211ENST00000528787 TMEM263Q8WUH6 116 aaKnown RBP5.8□□□□□ -1.48
SSBP3-211ENST00000528787 IGHV1OR15-1A0A075B7D0 117 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 TRAV8-1A0A0A6YYK1 113 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 TRAV12-3A0A0B4J271 114 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 TRAV34A0A0B4J273 112 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 CBY3A6NI87 242 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 B4DEV8 164 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 PPP1R2P9O14990 202 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 P01737 135 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 PRB2P02812 416 aaPredicted RBP5.79□□□□□ -1.48
SSBP3-211ENST00000528787 CXCL1P09341 107 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 MGST1P10620 155 aaKnown RBP5.79□□□□□ -1.48
SSBP3-211ENST00000528787 ZNF415Q09FC8 603 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 COMMD7Q86VX2 200 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 ZFAND2AQ8N6M9 145 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 SPXQ9BT56 116 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 MLST8Q9BVC4 326 aa5.79□□□□□ -1.48
SSBP3-211ENST00000528787 C11orf68Q9H3H3 251 aaKnown RBP5.79□□□□□ -1.48
SSBP3-211ENST00000528787 TRAV12-2A0A075B6T6 113 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 IGHV3OR16-12A0A075B7B8 117 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 KRBOX1C9JBD0 128 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 CIDEAO60543 219 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 ORM1P02763 201 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 SFTA3P0C7M3 94 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 S100A4P26447 101 aaKnown RBP5.78□□□□□ -1.48
SSBP3-211ENST00000528787 FXYD7P58549 80 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 OR5I1Q13606 314 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 SBSPONQ8IVN8 264 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 CSNK1G2-AS1Q8NCQ2 148 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 BORCS7Q96B45 105 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 LINC00479Q96M42 142 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 TP53TG3Q9ULZ0 132 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 TIMM8BQ9Y5J9 83 aaPredicted RBP5.78□□□□□ -1.48
SSBP3-211ENST00000528787 CMYA5Q8N3K9 4069 aa5.78□□□□□ -1.48
SSBP3-211ENST00000528787 A0A1W2PPQ1 181 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 FAM231BA6NCW3 169 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 LYRM9A8MSI8 78 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 A8MWL6 223 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 J3KRW8 73 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 CRXO43186 299 aaPredicted RBP5.77□□□□□ -1.49
SSBP3-211ENST00000528787 ZNF324O75467 553 aaPredicted RBP5.77□□□□□ -1.49
SSBP3-211ENST00000528787 SPART-AS1P0CW21 52 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 MED14OSP0DP75 135 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 ASIPP42127 132 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 DEFB1P60022 68 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 ERVFC1-1P60608 527 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 BTN1A1Q13410 526 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 LGALS9BQ3B8N2 356 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 LINC01559Q495D7 138 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 CT83Q5H943 113 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 PIK3CD-AS1Q5SR53 167 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 FAM231DQ6ZW35 169 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 SYT8Q8NBV8 401 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 PCNPQ8WW12 178 aaKnown RBP5.77□□□□□ -1.49
SSBP3-211ENST00000528787 SGK494Q96LW2 274 aa5.77□□□□□ -1.49
SSBP3-211ENST00000528787 OVOL2Q9BRP0 275 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms