RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 MIR17HGQ75NE6 70 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 C16orf82Q7Z2V1 217 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 RPP25LQ8N5L8 163 aaKnown RBP3.2□□□□□ -1.9
CD44-226ENST00000527889 TTC9CQ8N5M4 171 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 MAPKAPK5-AS1Q8N8E1 139 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 GATAD1Q8WUU5 269 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 ORAOV1Q8WV07 137 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 MBD3L1Q8WWY6 194 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 LINC00052Q96N35 136 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 TRGV9Q99603 122 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 RARRES2Q99969 163 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 SCRT1Q9BWW7 348 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 ZNF355PQ9NSJ1 428 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 PRO0628Q9UI54 55 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 PSG8Q9UQ74 426 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 COX11Q9Y6N1 276 aa3.2□□□□□ -1.9
CD44-226ENST00000527889 TRAV1-1A0A0B4J248 108 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 TRAV5A0A0B4J249 113 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 IGHV3-35A0A0C4DH35 117 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 OR2T8A6NH00 312 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 C9JQL5 133 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 CORTO00230 105 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 COX7A2P2O60397 106 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 IGKV1-17P01599 117 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 IGHG2P01859 326 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 OR5G3P0C626 314 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 IGLC1P0CG04 106 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 ARL14EPLP0DKL9 152 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 PSG1P11464 419 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 GATA1P15976 413 aaPredicted RBP3.19□□□□□ -1.9
CD44-226ENST00000527889 CRIP2P52943 208 aaPredicted RBP3.19□□□□□ -1.9
CD44-226ENST00000527889 LYZP61626 148 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 RHOGP84095 191 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 RHEBQ15382 184 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 C15orf32Q32M92 178 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 Q56UQ5 140 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 C10orf99Q6UWK7 81 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 PATE2Q6UY27 113 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 C12orf54Q6X4T0 127 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 COX8CQ7Z4L0 72 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 FAM19A5Q7Z5A7 132 aaPredicted RBP3.19□□□□□ -1.9
CD44-226ENST00000527889 SLC35E3Q7Z769 313 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 ZNF329Q86UD4 541 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 OR1B1Q8NGR6 318 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 OR4X1Q8NH49 305 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 RXFP4Q8TDU9 374 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 EIF5A2Q9GZV4 153 aaKnown RBP3.19□□□□□ -1.9
CD44-226ENST00000527889 TMEM126AQ9H061 195 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 KCNIP2Q9NS61 270 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 GNG13Q9P2W3 67 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 HSPB8Q9UJY1 196 aa3.19□□□□□ -1.9
CD44-226ENST00000527889 MUC4Q99102 2169 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 IGHV3OR16-8A0A075B7F1 116 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 TMEM218A2RU14 115 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 RBFOX3A6NFN3 312 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 DNAJC9-AS1A6NH13 148 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 G3V4G9 280 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 GNG7O60262 68 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 OR7C2O60412 319 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 LY6G6DO95868 133 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 IGHV3-11P01762 117 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 IGHG4P01861 327 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 TRGV3P03979 118 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 HSPB1P04792 205 aaKnown RBP3.18□□□□□ -1.9
CD44-226ENST00000527889 SNRPCP09234 159 aaKnown RBP3.18□□□□□ -1.9
CD44-226ENST00000527889 SFTA3P0C7M3 94 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 BCL2P10415 239 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 ADCYAP1P18509 176 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 ORM2P19652 201 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 GCHFRP30047 84 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 GPR183P32249 361 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 TPPP2P59282 170 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 CD164Q04900 197 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 PEA15Q15121 130 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 ZNF506Q5JVG8 444 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 COL5A1-AS1Q5SY13 56 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 C10orf113Q5VZT2 155 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 CLEC19AQ6UXS0 136 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 FAM24BQ8N5W8 94 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 NRACQ8N912 160 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 OR51G1Q8NGK1 321 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 ZNF502Q8TBZ5 544 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 DNAJC30Q96LL9 226 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 PBDC1Q9BVG4 233 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 ZNF702PQ9H963 129 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 GNB4Q9HAV0 340 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 ESM1Q9NQ30 184 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 C21orf62Q9NYP8 219 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 FUT9Q9Y231 359 aa3.18□□□□□ -1.9
CD44-226ENST00000527889 PRKDCP78527 4128 aaKnown RBP3.18□□□□□ -1.9
CD44-226ENST00000527889 TMEM189A5PLL7 270 aa3.17□□□□□ -1.9
CD44-226ENST00000527889 HYPMO75409 117 aa3.17□□□□□ -1.9
CD44-226ENST00000527889 CXorf1O96002 111 aa3.17□□□□□ -1.9
CD44-226ENST00000527889 TOMM40O96008 361 aa3.17□□□□□ -1.9
CD44-226ENST00000527889 CA1P00915 261 aaPredicted RBP3.17□□□□□ -1.9
CD44-226ENST00000527889 TRBV12-3P01733 135 aa3.17□□□□□ -1.9
CD44-226ENST00000527889 APOC3P02656 99 aa3.17□□□□□ -1.9
CD44-226ENST00000527889 IL4P05112 153 aa3.17□□□□□ -1.9
CD44-226ENST00000527889 SRP19P09132 144 aaKnown RBP3.17□□□□□ -1.9
CD44-226ENST00000527889 PYYP10082 97 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms