RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 CMTM2Q8TAZ6 248 aa13.44□□□□□ -0.26
CAPN1-211ENST00000527739 PGPA6NDG6 321 aa13.43□□□□□ -0.26
CAPN1-211ENST00000527739 HMGB3O15347 200 aaKnown RBP13.43□□□□□ -0.26
CAPN1-211ENST00000527739 PTTG1O95997 202 aa13.43□□□□□ -0.26
CAPN1-211ENST00000527739 RAB2AP61019 212 aa13.43□□□□□ -0.26
CAPN1-211ENST00000527739 OR10G4Q8NGN3 311 aa13.43□□□□□ -0.26
CAPN1-211ENST00000527739 OR10G9Q8NGN4 311 aa13.43□□□□□ -0.26
CAPN1-211ENST00000527739 OR10G7Q8NGN6 311 aa13.43□□□□□ -0.26
CAPN1-211ENST00000527739 NBDYA0A0U1RRE5 68 aa13.42□□□□□ -0.26
CAPN1-211ENST00000527739 RBAKDNA6NC62 111 aa13.42□□□□□ -0.26
CAPN1-211ENST00000527739 DIRC3C9JPN6 131 aa13.42□□□□□ -0.26
CAPN1-211ENST00000527739 FAM74A1Q5RGS3 127 aa13.42□□□□□ -0.26
CAPN1-211ENST00000527739 MUC21Q5SSG8 566 aa13.42□□□□□ -0.26
CAPN1-211ENST00000527739 HSD17B11Q8NBQ5 300 aa13.42□□□□□ -0.26
CAPN1-211ENST00000527739 OTORQ9NRC9 128 aa13.42□□□□□ -0.26
CAPN1-211ENST00000527739 MRPL16Q9NX20 251 aaKnown RBP13.42□□□□□ -0.26
CAPN1-211ENST00000527739 IGHV3-53P01767 116 aa13.41□□□□□ -0.26
CAPN1-211ENST00000527739 TCL1AP56279 114 aa13.41□□□□□ -0.26
CAPN1-211ENST00000527739 PQLC2Q6ZP29 291 aa13.41□□□□□ -0.26
CAPN1-211ENST00000527739 TRBV7-9A0A0J9YWB2 115 aa13.4□□□□□ -0.26
CAPN1-211ENST00000527739 SPINK4O60575 86 aa13.4□□□□□ -0.26
CAPN1-211ENST00000527739 ZNF266Q14584 549 aa13.4□□□□□ -0.26
CAPN1-211ENST00000527739 IBA57Q5T440 356 aaKnown RBP13.4□□□□□ -0.26
CAPN1-211ENST00000527739 ZNF415Q09FC8 603 aa13.39□□□□□ -0.27
CAPN1-211ENST00000527739 GOLT1AQ6ZVE7 132 aa13.39□□□□□ -0.27
CAPN1-211ENST00000527739 Q9H8V8 135 aa13.39□□□□□ -0.27
CAPN1-211ENST00000527739 MED14OSP0DP75 135 aa13.38□□□□□ -0.27
CAPN1-211ENST00000527739 ESRGQ1W209 222 aa13.38□□□□□ -0.27
CAPN1-211ENST00000527739 FAM159AQ6UWV7 190 aa13.38□□□□□ -0.27
CAPN1-211ENST00000527739 NAGKQ9UJ70 344 aa13.38□□□□□ -0.27
CAPN1-211ENST00000527739 H3BNG1 76 aa13.37□□□□□ -0.27
CAPN1-211ENST00000527739 CDC34P49427 236 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-211ENST00000527739 TMEM183BQ1AE95 376 aa13.37□□□□□ -0.27
CAPN1-211ENST00000527739 Q5BKY6 102 aa13.37□□□□□ -0.27
CAPN1-211ENST00000527739 TMEM183AQ8IXX5 376 aa13.37□□□□□ -0.27
CAPN1-211ENST00000527739 C6orf223Q8N319 242 aa13.37□□□□□ -0.27
CAPN1-211ENST00000527739 VSIG2Q96IQ7 327 aa13.37□□□□□ -0.27
CAPN1-211ENST00000527739 LENEPQ9Y5L5 61 aa13.37□□□□□ -0.27
CAPN1-211ENST00000527739 NACAE9PAV3 2078 aa13.36□□□□□ -0.27
CAPN1-211ENST00000527739 PAX4O43316 350 aa13.36□□□□□ -0.27
CAPN1-211ENST00000527739 ARL14EPLP0DKL9 152 aa13.36□□□□□ -0.27
CAPN1-211ENST00000527739 GNG5P63218 68 aa13.36□□□□□ -0.27
CAPN1-211ENST00000527739 INO80EQ8NBZ0 244 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-211ENST00000527739 ST6GAL2Q96JF0 529 aa13.36□□□□□ -0.27
CAPN1-211ENST00000527739 C18orf15Q96N68 181 aa13.36□□□□□ -0.27
CAPN1-211ENST00000527739 AQP10Q96PS8 301 aa13.36□□□□□ -0.27
CAPN1-211ENST00000527739 MDFICQ9P1T7 246 aa13.36□□□□□ -0.27
CAPN1-211ENST00000527739 ATP6V0CP27449 155 aa13.35□□□□□ -0.27
CAPN1-211ENST00000527739 RAB24Q969Q5 203 aa13.35□□□□□ -0.27
CAPN1-211ENST00000527739 TRGV11A0A075B6L2 103 aa13.34□□□□□ -0.27
CAPN1-211ENST00000527739 FXYD6-FXYD2A0A087WZ82 144 aa13.34□□□□□ -0.27
CAPN1-211ENST00000527739 A0A096LPF7 62 aa13.34□□□□□ -0.27
CAPN1-211ENST00000527739 TRAV8-1A0A0A6YYK1 113 aa13.34□□□□□ -0.27
CAPN1-211ENST00000527739 F6UZH7 168 aa13.34□□□□□ -0.27
CAPN1-211ENST00000527739 GIPP09681 153 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-211ENST00000527739 Q6AWC8 147 aa13.34□□□□□ -0.27
CAPN1-211ENST00000527739 OR2G3Q8NGZ4 309 aa13.34□□□□□ -0.27
CAPN1-211ENST00000527739 TMED6Q8WW62 240 aa13.34□□□□□ -0.27
CAPN1-211ENST00000527739 SGK494Q96LW2 274 aa13.34□□□□□ -0.27
CAPN1-211ENST00000527739 C8orf49Q96NF6 230 aa13.34□□□□□ -0.27
CAPN1-211ENST00000527739 TREM1Q9NP99 234 aa13.34□□□□□ -0.27
CAPN1-211ENST00000527739 TRGV4A0A0C4DH28 118 aa13.33□□□□□ -0.28
CAPN1-211ENST00000527739 MBP02144 154 aa13.33□□□□□ -0.28
CAPN1-211ENST00000527739 TNP2Q05952 138 aa13.33□□□□□ -0.28
CAPN1-211ENST00000527739 IQCF2Q8IXL9 164 aa13.33□□□□□ -0.28
CAPN1-211ENST00000527739 PSMG3Q9BT73 122 aaPredicted RBP13.33□□□□□ -0.28
CAPN1-211ENST00000527739 KRTAP4-5Q9BYR2 181 aa13.33□□□□□ -0.28
CAPN1-211ENST00000527739 SH3BGRL3Q9H299 93 aa13.33□□□□□ -0.28
CAPN1-211ENST00000527739 HHLA3Q9XRX5 114 aa13.33□□□□□ -0.28
CAPN1-211ENST00000527739 MRPS16Q9Y3D3 137 aaKnown RBP13.33□□□□□ -0.28
CAPN1-211ENST00000527739 ICOSQ9Y6W8 199 aa13.33□□□□□ -0.28
CAPN1-211ENST00000527739 GNRH2O43555 120 aa13.32□□□□□ -0.28
CAPN1-211ENST00000527739 STAG3L2P0CL84 134 aa13.32□□□□□ -0.28
CAPN1-211ENST00000527739 STAG3L3P0CL85 134 aa13.32□□□□□ -0.28
CAPN1-211ENST00000527739 GCHFRP30047 84 aa13.32□□□□□ -0.28
CAPN1-211ENST00000527739 SLAQ13239 276 aa13.32□□□□□ -0.28
CAPN1-211ENST00000527739 TTC32Q5I0X7 151 aa13.32□□□□□ -0.28
CAPN1-211ENST00000527739 SPXQ9BT56 116 aa13.32□□□□□ -0.28
CAPN1-211ENST00000527739 ACTR3CQ9C0K3 210 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-211ENST00000527739 PRO0255Q9UI72 69 aa13.32□□□□□ -0.28
CAPN1-211ENST00000527739 MUC4Q99102 2169 aa13.32□□□□□ -0.28
CAPN1-211ENST00000527739 HSPG2P98160 4391 aa13.32□□□□□ -0.28
CAPN1-211ENST00000527739 BORCS7-ASMTA0A0B4J1R7 106 aa13.31□□□□□ -0.28
CAPN1-211ENST00000527739 TRAV21A0A0B4J279 112 aa13.31□□□□□ -0.28
CAPN1-211ENST00000527739 SFTA3P0C7M3 94 aa13.31□□□□□ -0.28
CAPN1-211ENST00000527739 SERF2P84101 59 aa13.31□□□□□ -0.28
CAPN1-211ENST00000527739 ZNF575Q86XF7 245 aa13.31□□□□□ -0.28
CAPN1-211ENST00000527739 ARL6IP6Q8N6S5 226 aa13.31□□□□□ -0.28
CAPN1-211ENST00000527739 ASB13Q8WXK3 278 aa13.31□□□□□ -0.28
CAPN1-211ENST00000527739 NDFIP1Q9BT67 221 aa13.31□□□□□ -0.28
CAPN1-211ENST00000527739 FHL2Q14192 279 aa13.3□□□□□ -0.28
CAPN1-211ENST00000527739 RPL7L1Q6DKI1 246 aaKnown RBP13.3□□□□□ -0.28
CAPN1-211ENST00000527739 OR2T35Q8NGX2 323 aa13.3□□□□□ -0.28
CAPN1-211ENST00000527739 TVP23CQ96ET8 276 aa13.3□□□□□ -0.28
CAPN1-211ENST00000527739 UPK3BQ9BT76 320 aa13.3□□□□□ -0.28
CAPN1-211ENST00000527739 K7EQM0 130 aa13.29□□□□□ -0.28
CAPN1-211ENST00000527739 CXorf1O96002 111 aa13.29□□□□□ -0.28
CAPN1-211ENST00000527739 CRYBA4P53673 196 aa13.29□□□□□ -0.28
CAPN1-211ENST00000527739 SUMO1P63165 101 aaKnown RBP13.29□□□□□ -0.28
CAPN1-211ENST00000527739 C5orf17Q8NAS9 161 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms