RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 IGHV3-73A0A0B4J1V6 119 aa11.72□□□□□ -0.53
USP47-207ENST00000527733 KNCNA6PVL3 124 aa11.72□□□□□ -0.53
USP47-207ENST00000527733 PLA2G2AP14555 144 aa11.72□□□□□ -0.53
USP47-207ENST00000527733 MORN5Q5VZ52 161 aa11.72□□□□□ -0.53
USP47-207ENST00000527733 PLA2G2EQ9NZK7 142 aa11.72□□□□□ -0.53
USP47-207ENST00000527733 IGHV1OR15-1A0A075B7D0 117 aa11.72□□□□□ -0.53
USP47-207ENST00000527733 PRSS2P07478 247 aa11.72□□□□□ -0.53
USP47-207ENST00000527733 GCSHP23434 173 aa11.72□□□□□ -0.53
USP47-207ENST00000527733 PSMB2P49721 201 aa11.72□□□□□ -0.53
USP47-207ENST00000527733 JMJD1CQ15652 2540 aa11.72□□□□□ -0.53
USP47-207ENST00000527733 CIRBPQ14011 172 aaKnown RBP11.72□□□□□ -0.53
USP47-207ENST00000527733 ZNF48Q96MX3 618 aaPredicted RBP11.72□□□□□ -0.53
USP47-207ENST00000527733 V9GYV3 84 aa11.72□□□□□ -0.53
USP47-207ENST00000527733 KMT2EQ8IZD2 1858 aa11.71□□□□□ -0.53
USP47-207ENST00000527733 ZC2HC1AQ96GY0 325 aa11.71□□□□□ -0.53
USP47-207ENST00000527733 AGPAT4-IT1Q9H0P7 198 aa11.71□□□□□ -0.53
USP47-207ENST00000527733 MS4A6AQ9H2W1 248 aa11.71□□□□□ -0.53
USP47-207ENST00000527733 TMEM238LA0A1B0GVL6 79 aa11.71□□□□□ -0.53
USP47-207ENST00000527733 WI2-2373I1.2A0A1W2PRP0 233 aa11.71□□□□□ -0.53
USP47-207ENST00000527733 A6NJY4 79 aa11.71□□□□□ -0.53
USP47-207ENST00000527733 TRAV8-6A0A0B4J262 113 aa11.71□□□□□ -0.54
USP47-207ENST00000527733 LENEPQ9Y5L5 61 aa11.71□□□□□ -0.54
USP47-207ENST00000527733 ARHGAP32A7KAX9 2087 aa11.71□□□□□ -0.54
USP47-207ENST00000527733 PRSS46E5RG02 174 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 IGHV3-53P01767 116 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 FOXI2Q6ZQN5 318 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 OR9G4Q8NGQ1 327 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 FAM167A-AS1Q96KT0 104 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 KLK9Q9UKQ9 250 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 TRAV12-2A0A075B6T6 113 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 A0A087WWL8 130 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 LAGE3Q14657 143 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 IFI27L1Q96BM0 104 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 TRIOO75962 3097 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 K7EMT4 169 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 VCYO14598 125 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 ANXA2RQ3ZCQ2 193 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 C16orf54Q6UWD8 224 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 GPHB5Q86YW7 130 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 HIST1H2BLQ99880 126 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 SPAG8Q99932 426 aaPredicted RBP11.7□□□□□ -0.54
USP47-207ENST00000527733 IGHV4OR15-8A0A075B7B6 117 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 A0A087WW49 117 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 LTAP01374 205 aa11.7□□□□□ -0.54
USP47-207ENST00000527733 TMEM213A2RRL7 107 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 DNAJC9-AS1A6NH13 148 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 F6UB75 175 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 H3BRM9 83 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 UBE2CO00762 179 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 CHCHD5Q9BSY4 110 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 MEIG1Q5JSS6 88 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 PET117Q6UWS5 81 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 Q6YL49 198 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 HIST3H2BBQ8N257 126 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 HIST1H4GQ99525 98 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 PMCHL2Q9BQD1 86 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 LOC102724200A0A096LPH7 203 aaPredicted RBP11.69□□□□□ -0.54
USP47-207ENST00000527733 RBAKDNA6NC62 111 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 LINC01548A6NM66 108 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 DDTP30046 118 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 ALKBH7Q9BT30 221 aaPredicted RBP11.69□□□□□ -0.54
USP47-207ENST00000527733 LAMTOR2Q9Y2Q5 125 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 DMRT1Q9Y5R6 373 aa11.69□□□□□ -0.54
USP47-207ENST00000527733 TNRC6BQ9UPQ9 1833 aaKnown RBP11.69□□□□□ -0.54
USP47-207ENST00000527733 CD5LO43866 347 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 ZNF25P17030 456 aaPredicted RBP11.68□□□□□ -0.54
USP47-207ENST00000527733 CLPSL1A2RUU4 121 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 C5orf52A6NGY3 159 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 RHODO00212 210 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 IGF1P05019 195 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 CRYGBP07316 175 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 TRANK1O15050 2925 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 DEFB130BP0DP73 79 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 DEFB130AP0DP74 79 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 GFI1BQ5VTD9 330 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 BPTFQ12830 3046 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 A0A1W2PPR1 153 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 J3QR89 54 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 RIPPLY3P57055 190 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 LINC01559Q495D7 138 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 TMEM256Q8N2U0 113 aa11.68□□□□□ -0.54
USP47-207ENST00000527733 SMKR1H3BMG3 65 aa11.67□□□□□ -0.54
USP47-207ENST00000527733 A8MWP6 167 aa11.67□□□□□ -0.54
USP47-207ENST00000527733 ZNF295-AS1Q8N0V1 137 aa11.67□□□□□ -0.54
USP47-207ENST00000527733 OR2K2Q8NGT1 345 aa11.67□□□□□ -0.54
USP47-207ENST00000527733 ADAMTS20P59510 1910 aa11.67□□□□□ -0.54
USP47-207ENST00000527733 IGHG4P01861 327 aa11.67□□□□□ -0.54
USP47-207ENST00000527733 CD28P10747 220 aa11.67□□□□□ -0.54
USP47-207ENST00000527733 HINT1P49773 126 aaPredicted RBP11.67□□□□□ -0.54
USP47-207ENST00000527733 FAM104BQ5XKR9 115 aa11.67□□□□□ -0.54
USP47-207ENST00000527733 TYMSP04818 313 aa11.66□□□□□ -0.54
USP47-207ENST00000527733 COL5A1-AS1Q5SY13 56 aa11.66□□□□□ -0.54
USP47-207ENST00000527733 ARL6IP6Q8N6S5 226 aa11.66□□□□□ -0.54
USP47-207ENST00000527733 CSTL1Q9H114 145 aa11.66□□□□□ -0.54
USP47-207ENST00000527733 CPAMD8Q8IZJ3 1885 aa11.66□□□□□ -0.54
USP47-207ENST00000527733 IGKV1D-37A0A075B6S9 117 aa11.66□□□□□ -0.54
USP47-207ENST00000527733 SMIM27A0A1W2PRY6 76 aa11.66□□□□□ -0.54
USP47-207ENST00000527733 ERASQ7Z444 233 aa11.66□□□□□ -0.54
USP47-207ENST00000527733 RAB37Q96AX2 223 aa11.66□□□□□ -0.54
USP47-207ENST00000527733 C2orf70A6NJV1 201 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms