RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 SSX7Q7RTT5 188 aa9.51□□□□□ -0.89
CAPN1-209ENST00000527469 MAP1LC3BQ9GZQ8 125 aa9.51□□□□□ -0.89
CAPN1-209ENST00000527469 IGHV1OR15-1A0A075B7D0 117 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 UMAD1C9J7I0 102 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 ZNF324O75467 553 aaPredicted RBP9.5□□□□□ -0.89
CAPN1-209ENST00000527469 SEC11BP0C7V7 166 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 TPT1P13693 172 aaKnown RBP9.5□□□□□ -0.89
CAPN1-209ENST00000527469 UBE2G2P60604 165 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 ZNF726P1Q15940 193 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 PRR9Q5T870 116 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 FAM159AQ6UWV7 190 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 Q6ZNX1 250 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 TMUB2Q71RG4 321 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 FAM213BQ8TBF2 198 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 SUN5Q8TC36 379 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 LINC00467Q9BRT7 94 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 TREM1Q9NP99 234 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 NAGKQ9UJ70 344 aa9.5□□□□□ -0.89
CAPN1-209ENST00000527469 TRAV8-1A0A0A6YYK1 113 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 A0A1W2PRE2 83 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 GAGE12BA1L429 117 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 GAGE7O76087 117 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 TCRAP04437 139 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 GAGE12FP0CL80 117 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 GAGE12GP0CL81 117 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 GAGE12IP0CL82 117 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 PPT1P50897 306 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 ANXA2RQ3ZCQ2 193 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 ZFP69Q49AA0 526 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 TMEM88Q6PEY1 159 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 AKAP14Q86UN6 197 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 TCTE3Q8IZS6 198 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 CYB561D1Q8N8Q1 229 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 NKX6-2Q9C056 277 aaPredicted RBP9.49□□□□□ -0.89
CAPN1-209ENST00000527469 TMPRSS5Q9H3S3 457 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 GSN-AS1Q9NRJ2 163 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 EPDR1Q9UM22 224 aa9.49□□□□□ -0.89
CAPN1-209ENST00000527469 PLECQ15149 4684 aaKnown RBP9.49□□□□□ -0.89
CAPN1-209ENST00000527469 TRGV2A0A075B6R0 118 aa9.48□□□□□ -0.89
CAPN1-209ENST00000527469 FBLL1A6NHQ2 334 aaKnown RBP9.48□□□□□ -0.89
CAPN1-209ENST00000527469 GGTLC3B5MD39 225 aa9.48□□□□□ -0.89
CAPN1-209ENST00000527469 P0DMU3 169 aa9.48□□□□□ -0.89
CAPN1-209ENST00000527469 FAM231AP0DMU4 169 aa9.48□□□□□ -0.89
CAPN1-209ENST00000527469 FAM231CP0DMU5 169 aa9.48□□□□□ -0.89
CAPN1-209ENST00000527469 ZNF415Q09FC8 603 aa9.48□□□□□ -0.89
CAPN1-209ENST00000527469 DAZ2Q13117 558 aaKnown RBP9.48□□□□□ -0.89
CAPN1-209ENST00000527469 MUC21Q5SSG8 566 aa9.48□□□□□ -0.89
CAPN1-209ENST00000527469 EIF5AL1Q6IS14 154 aaKnown RBP9.48□□□□□ -0.89
CAPN1-209ENST00000527469 UBE2DNLQ8IWF7 75 aa9.48□□□□□ -0.89
CAPN1-209ENST00000527469 SFT2D1Q8WV19 159 aa9.48□□□□□ -0.89
CAPN1-209ENST00000527469 SGK494Q96LW2 274 aa9.48□□□□□ -0.89
CAPN1-209ENST00000527469 ATG101Q9BSB4 218 aa9.48□□□□□ -0.89
CAPN1-209ENST00000527469 ALMS1Q8TCU4 4167 aa9.48□□□□□ -0.89
CAPN1-209ENST00000527469 TRGV11A0A075B6L2 103 aa9.47□□□□□ -0.89
CAPN1-209ENST00000527469 TRGV1A0A0A0MS02 117 aa9.47□□□□□ -0.89
CAPN1-209ENST00000527469 TRAV21A0A0B4J279 112 aa9.47□□□□□ -0.89
CAPN1-209ENST00000527469 F6UZH7 168 aa9.47□□□□□ -0.89
CAPN1-209ENST00000527469 FHITP49789 147 aa9.47□□□□□ -0.89
CAPN1-209ENST00000527469 OR5I1Q13606 314 aa9.47□□□□□ -0.89
CAPN1-209ENST00000527469 CST9LP1Q5W188 147 aa9.47□□□□□ -0.89
CAPN1-209ENST00000527469 DPPA3Q6W0C5 159 aa9.47□□□□□ -0.89
CAPN1-209ENST00000527469 PRNTQ86SH4 94 aa9.47□□□□□ -0.89
CAPN1-209ENST00000527469 PSG8Q9UQ74 426 aa9.47□□□□□ -0.89
CAPN1-209ENST00000527469 RYR2Q92736 4967 aa9.47□□□□□ -0.89
CAPN1-209ENST00000527469 A0A1B0GV50 99 aa9.46□□□□□ -0.9
CAPN1-209ENST00000527469 TCL1AP56279 114 aa9.46□□□□□ -0.9
CAPN1-209ENST00000527469 FLI1Q01543 452 aaPredicted RBP9.46□□□□□ -0.9
CAPN1-209ENST00000527469 TMEM183BQ1AE95 376 aa9.46□□□□□ -0.9
CAPN1-209ENST00000527469 IBA57Q5T440 356 aaKnown RBP9.46□□□□□ -0.9
CAPN1-209ENST00000527469 Q6AWC8 147 aa9.46□□□□□ -0.9
CAPN1-209ENST00000527469 Q6ZQT7 251 aa9.46□□□□□ -0.9
CAPN1-209ENST00000527469 Q6ZTI0 123 aa9.46□□□□□ -0.9
CAPN1-209ENST00000527469 TMEM183AQ8IXX5 376 aa9.46□□□□□ -0.9
CAPN1-209ENST00000527469 TMEM75Q8N9X5 138 aa9.46□□□□□ -0.9
CAPN1-209ENST00000527469 C15orf53Q8NAA6 179 aa9.46□□□□□ -0.9
CAPN1-209ENST00000527469 FAM74A7A6NL05 159 aa9.45□□□□□ -0.9
CAPN1-209ENST00000527469 PEX7O00628 323 aa9.45□□□□□ -0.9
CAPN1-209ENST00000527469 C1QBP02746 253 aa9.45□□□□□ -0.9
CAPN1-209ENST00000527469 H2AFB1P0C5Y9 115 aa9.45□□□□□ -0.9
CAPN1-209ENST00000527469 SAPCD1Q5SSQ6 148 aa9.45□□□□□ -0.9
CAPN1-209ENST00000527469 C11orf72Q8NBR9 251 aa9.45□□□□□ -0.9
CAPN1-209ENST00000527469 HIST1H2BAQ96A08 127 aa9.45□□□□□ -0.9
CAPN1-209ENST00000527469 SDF2L1Q9HCN8 221 aa9.45□□□□□ -0.9
CAPN1-209ENST00000527469 TP53TG3Q9ULZ0 132 aa9.45□□□□□ -0.9
CAPN1-209ENST00000527469 KLF12Q9Y4X4 402 aa9.45□□□□□ -0.9
CAPN1-209ENST00000527469 NUDT3O95989 172 aa9.44□□□□□ -0.9
CAPN1-209ENST00000527469 GCGP01275 180 aa9.44□□□□□ -0.9
CAPN1-209ENST00000527469 UBE2G1P62253 170 aa9.44□□□□□ -0.9
CAPN1-209ENST00000527469 SMUG1Q53HV7 270 aa9.44□□□□□ -0.9
CAPN1-209ENST00000527469 KCNS1Q96KK3 526 aa9.44□□□□□ -0.9
CAPN1-209ENST00000527469 SACSQ9NZJ4 4579 aa9.43□□□□□ -0.9
CAPN1-209ENST00000527469 TRAV34A0A0B4J273 112 aa9.43□□□□□ -0.9
CAPN1-209ENST00000527469 TEX46H3BTG2 121 aa9.43□□□□□ -0.9
CAPN1-209ENST00000527469 SPINK4O60575 86 aa9.43□□□□□ -0.9
CAPN1-209ENST00000527469 LGALS9BQ3B8N2 356 aa9.43□□□□□ -0.9
CAPN1-209ENST00000527469 LGALSLQ3ZCW2 172 aaPredicted RBP9.43□□□□□ -0.9
CAPN1-209ENST00000527469 LINC00612Q8N6U2 182 aa9.43□□□□□ -0.9
CAPN1-209ENST00000527469 MBD3L1Q8WWY6 194 aa9.43□□□□□ -0.9
CAPN1-209ENST00000527469 TVP23CQ96ET8 276 aa9.43□□□□□ -0.9
CAPN1-209ENST00000527469 C8orf49Q96NF6 230 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms