RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TCF24Q7RTU0 167 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 TMEM61Q8N0U2 210 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 PPP1R14BQ96C90 147 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 GNPNAT1Q96EK6 184 aaPredicted RBP2.27□□□□□ -2.05
VPS13B-209ENST00000521559 PFDN5Q99471 154 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 RNF2Q99496 336 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 RSG1Q9BU20 258 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 PBDC1Q9BVG4 233 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 SCRT1Q9BWW7 348 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 SLC25A39Q9BZJ4 359 aaPredicted RBP2.27□□□□□ -2.05
VPS13B-209ENST00000521559 ARL6Q9H0F7 186 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 ARV1Q9H2C2 271 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 HIGD1AQ9Y241 93 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 SETD2Q9BYW2 2564 aaPredicted RBP2.27□□□□□ -2.05
VPS13B-209ENST00000521559 FBN1P35555 2871 aaKnown RBP2.27□□□□□ -2.05
VPS13B-209ENST00000521559 TNCP24821 2201 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 ATRQ13535 2644 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 NF1P21359 2839 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 TRAV5A0A0B4J249 113 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 KANTRA0A1W2PQU2 76 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 OR4C46A6NHA9 309 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 H3BRN7 92 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 DNASE2O00115 360 aaPredicted RBP2.26□□□□□ -2.05
VPS13B-209ENST00000521559 PFDN1O60925 122 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 MBP02144 154 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 RPL7P18124 248 aaKnown RBP2.26□□□□□ -2.05
VPS13B-209ENST00000521559 M6PRP20645 277 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 GALR1P47211 349 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 RHOBP62745 196 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 SERF2P84101 59 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 ACOT6Q3I5F7 207 aaPredicted RBP2.26□□□□□ -2.05
VPS13B-209ENST00000521559 GCSAMLQ5JQS6 135 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 FAM78BQ5VT40 261 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 C2orf66Q6UXQ4 117 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 ERASQ7Z444 233 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 LINC00305Q7Z4B0 112 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 OR8I2Q8N0Y5 310 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 C9orf62Q8N4C0 152 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 HSD17B11Q8NBQ5 300 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 OR2G3Q8NGZ4 309 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 C9orf85Q96MD7 179 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 GPR82Q96P67 336 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 PSMG3Q9BT73 122 aaPredicted RBP2.26□□□□□ -2.05
VPS13B-209ENST00000521559 MRPL32Q9BYC8 188 aaKnown RBP2.26□□□□□ -2.05
VPS13B-209ENST00000521559 MS4A6AQ9H2W1 248 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 TMEM14CQ9P0S9 112 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 DHRS4-AS1Q9P1J3 65 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 RFNGQ9Y644 331 aa2.26□□□□□ -2.05
VPS13B-209ENST00000521559 IGKV3-7A0A075B6H7 116 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 TRAV8-2A0A0B4J237 113 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 A0A1W2PPV4 95 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 OR11H12B2RN74 326 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 UMAD1C9J7I0 102 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 H0Y9J4 135 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 H3BQ15 152 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 K7EIL1 84 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 MRPS12O15235 138 aaKnown RBP2.25□□□□□ -2.05
VPS13B-209ENST00000521559 PLXNB1O43157 2135 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 ZNF253O75346 499 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 PRB2P02812 416 aaPredicted RBP2.25□□□□□ -2.05
VPS13B-209ENST00000521559 CD7P09564 240 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 NBEAP1P0C6P0 100 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 SEC11BP0C7V7 166 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 IGLC2P0DOY2 106 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 HIST1H1EP10412 219 aaKnown RBP2.25□□□□□ -2.05
VPS13B-209ENST00000521559 TPT1P13693 172 aaKnown RBP2.25□□□□□ -2.05
VPS13B-209ENST00000521559 TFPI2P48307 235 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 MEOX2P50222 304 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 TAS2R45P59539 299 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 RAB2AP61019 212 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 DEFA6Q01524 100 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 GUK1Q16774 197 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 TMEM41BQ5BJD5 291 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 AKR1C8PQ5T2L2 129 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 SAMD13Q5VXD3 122 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 SPATA31B1PQ5VZV4 182 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 EIF5AL1Q6IS14 154 aaKnown RBP2.25□□□□□ -2.05
VPS13B-209ENST00000521559 MIR17HGQ75NE6 70 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 SLC51BQ86UW2 128 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 BPIFA4PQ86YQ2 179 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 KRTAP11-1Q8IUC1 163 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 BAP18Q8IXM2 172 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 RPP25LQ8N5L8 163 aaKnown RBP2.25□□□□□ -2.05
VPS13B-209ENST00000521559 STXBP6Q8NFX7 210 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 OR10G4Q8NGN3 311 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 OR10G9Q8NGN4 311 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 STOML3Q8TAV4 291 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 DCANP1Q8TF63 244 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 FAM167A-AS1Q96KT0 104 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 PAXXQ9BUH6 204 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 ZNF471Q9BX82 626 aaPredicted RBP2.25□□□□□ -2.05
VPS13B-209ENST00000521559 SLC25A2Q9BXI2 301 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 ACTR3CQ9C0K3 210 aaPredicted RBP2.25□□□□□ -2.05
VPS13B-209ENST00000521559 SH3BGRL3Q9H299 93 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 OR51M1Q9H341 326 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 SLC25A22Q9H936 323 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 RPRMQ9NS64 109 aa2.25□□□□□ -2.05
VPS13B-209ENST00000521559 FUT9Q9Y231 359 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms