RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 OR10G4Q8NGN3 311 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 OR10G9Q8NGN4 311 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 OR10G7Q8NGN6 311 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 OR2G3Q8NGZ4 309 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 ZNRF2Q8NHG8 242 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 TMED6Q8WW62 240 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 ASB13Q8WXK3 278 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 TP53TG3Q9ULZ0 132 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 LINC00588Q9Y4M8 146 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 KLF12Q9Y4X4 402 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 PGPA6NDG6 321 aa11.87□□□□□ -0.51
SQLE-205ENST00000521232 TMPRSS5Q9H3S3 457 aa11.87□□□□□ -0.51
SQLE-205ENST00000521232 KIAA1109Q2LD37 5005 aa11.86□□□□□ -0.51
SQLE-205ENST00000521232 TRGV2A0A075B6R0 118 aa11.86□□□□□ -0.51
SQLE-205ENST00000521232 TRGV1A0A0A0MS02 117 aa11.86□□□□□ -0.51
SQLE-205ENST00000521232 A0A0J9YY99 117 aa11.86□□□□□ -0.51
SQLE-205ENST00000521232 GIPP09681 153 aaPredicted RBP11.86□□□□□ -0.51
SQLE-205ENST00000521232 FAM74A1Q5RGS3 127 aa11.86□□□□□ -0.51
SQLE-205ENST00000521232 CMTM2Q8TAZ6 248 aa11.86□□□□□ -0.51
SQLE-205ENST00000521232 HYLS1Q96M11 299 aa11.86□□□□□ -0.51
SQLE-205ENST00000521232 PSMG3Q9BT73 122 aaPredicted RBP11.86□□□□□ -0.51
SQLE-205ENST00000521232 SERF2P84101 59 aa11.85□□□□□ -0.51
SQLE-205ENST00000521232 SOHLH1Q5JUK2 328 aa11.85□□□□□ -0.51
SQLE-205ENST00000521232 C1orf134Q5TEV5 83 aa11.85□□□□□ -0.51
SQLE-205ENST00000521232 Q6AWC8 147 aa11.85□□□□□ -0.51
SQLE-205ENST00000521232 SSX7Q7RTT5 188 aa11.85□□□□□ -0.51
SQLE-205ENST00000521232 HSD17B11Q8NBQ5 300 aa11.85□□□□□ -0.51
SQLE-205ENST00000521232 ARPC5LQ9BPX5 153 aa11.85□□□□□ -0.51
SQLE-205ENST00000521232 NBDYA0A0U1RRE5 68 aa11.84□□□□□ -0.51
SQLE-205ENST00000521232 HMGB3O15347 200 aaKnown RBP11.84□□□□□ -0.51
SQLE-205ENST00000521232 STAG3L2P0CL84 134 aa11.84□□□□□ -0.51
SQLE-205ENST00000521232 STAG3L3P0CL85 134 aa11.84□□□□□ -0.51
SQLE-205ENST00000521232 ATP6V0CP27449 155 aa11.84□□□□□ -0.51
SQLE-205ENST00000521232 CDC34P49427 236 aaPredicted RBP11.84□□□□□ -0.51
SQLE-205ENST00000521232 SUN5Q8TC36 379 aa11.84□□□□□ -0.51
SQLE-205ENST00000521232 VSIG2Q96IQ7 327 aa11.84□□□□□ -0.51
SQLE-205ENST00000521232 MBP02144 154 aa11.83□□□□□ -0.52
SQLE-205ENST00000521232 INO80EQ8NBZ0 244 aaPredicted RBP11.83□□□□□ -0.52
SQLE-205ENST00000521232 ST6GAL2Q96JF0 529 aa11.83□□□□□ -0.52
SQLE-205ENST00000521232 ARL14EPLP0DKL9 152 aa11.82□□□□□ -0.52
SQLE-205ENST00000521232 ZNF415Q09FC8 603 aa11.82□□□□□ -0.52
SQLE-205ENST00000521232 ESRGQ1W209 222 aa11.82□□□□□ -0.52
SQLE-205ENST00000521232 MUC21Q5SSG8 566 aa11.82□□□□□ -0.52
SQLE-205ENST00000521232 GOLT1AQ6ZVE7 132 aa11.82□□□□□ -0.52
SQLE-205ENST00000521232 RAB24Q969Q5 203 aa11.82□□□□□ -0.52
SQLE-205ENST00000521232 Q9H8V8 135 aa11.82□□□□□ -0.52
SQLE-205ENST00000521232 TNFSF18Q9UNG2 199 aa11.82□□□□□ -0.52
SQLE-205ENST00000521232 RNF222A6NCQ9 220 aa11.81□□□□□ -0.52
SQLE-205ENST00000521232 TDRG1Q3Y452 100 aa11.81□□□□□ -0.52
SQLE-205ENST00000521232 FAM159AQ6UWV7 190 aa11.81□□□□□ -0.52
SQLE-205ENST00000521232 TVP23CQ96ET8 276 aa11.81□□□□□ -0.52
SQLE-205ENST00000521232 UPK3BQ9BT76 320 aa11.81□□□□□ -0.52
SQLE-205ENST00000521232 MRPL16Q9NX20 251 aaKnown RBP11.81□□□□□ -0.52
SQLE-205ENST00000521232 MDFICQ9P1T7 246 aa11.81□□□□□ -0.52
SQLE-205ENST00000521232 RPH3ALQ9UNE2 315 aa11.81□□□□□ -0.52
SQLE-205ENST00000521232 A0A096LPF7 62 aa11.8□□□□□ -0.52
SQLE-205ENST00000521232 RGS21Q2M5E4 152 aa11.8□□□□□ -0.52
SQLE-205ENST00000521232 SH3BGRL3Q9H299 93 aa11.8□□□□□ -0.52
SQLE-205ENST00000521232 TRAV8-1A0A0A6YYK1 113 aa11.79□□□□□ -0.52
SQLE-205ENST00000521232 SERTM2A0A1B0GWG4 89 aa11.79□□□□□ -0.52
SQLE-205ENST00000521232 GCHFRP30047 84 aa11.79□□□□□ -0.52
SQLE-205ENST00000521232 GNG5P63218 68 aa11.79□□□□□ -0.52
SQLE-205ENST00000521232 SLAQ13239 276 aa11.79□□□□□ -0.52
SQLE-205ENST00000521232 RPL7L1Q6DKI1 246 aaKnown RBP11.79□□□□□ -0.52
SQLE-205ENST00000521232 OR2T35Q8NGX2 323 aa11.79□□□□□ -0.52
SQLE-205ENST00000521232 RASL10AQ92737 203 aa11.79□□□□□ -0.52
SQLE-205ENST00000521232 SPXQ9BT56 116 aa11.79□□□□□ -0.52
SQLE-205ENST00000521232 ACTR3CQ9C0K3 210 aaPredicted RBP11.79□□□□□ -0.52
SQLE-205ENST00000521232 TRGV11A0A075B6L2 103 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 FXYD6-FXYD2A0A087WZ82 144 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 BORCS7-ASMTA0A0B4J1R7 106 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 TRAV21A0A0B4J279 112 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 G3V3Q6 166 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 CXorf1O96002 111 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 IGHV3-53P01767 116 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 FHL2Q14192 279 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 TMEM183BQ1AE95 376 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 TMEM183AQ8IXX5 376 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 C6orf223Q8N319 242 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 TREM1Q9NP99 234 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 TMEM167BQ9NRX6 74 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 PRO0255Q9UI72 69 aa11.78□□□□□ -0.52
SQLE-205ENST00000521232 MRPS16Q9Y3D3 137 aaKnown RBP11.78□□□□□ -0.52
SQLE-205ENST00000521232 PAX4O43316 350 aa11.77□□□□□ -0.53
SQLE-205ENST00000521232 TCRAP04437 139 aa11.77□□□□□ -0.53
SQLE-205ENST00000521232 C5orf17Q8NAS9 161 aa11.77□□□□□ -0.53
SQLE-205ENST00000521232 HHLA3Q9XRX5 114 aa11.77□□□□□ -0.53
SQLE-205ENST00000521232 GNRH2O43555 120 aa11.76□□□□□ -0.53
SQLE-205ENST00000521232 CRYBA4P53673 196 aa11.76□□□□□ -0.53
SQLE-205ENST00000521232 SUMO1P63165 101 aaKnown RBP11.76□□□□□ -0.53
SQLE-205ENST00000521232 IQCF2Q8IXL9 164 aa11.76□□□□□ -0.53
SQLE-205ENST00000521232 SGK494Q96LW2 274 aa11.76□□□□□ -0.53
SQLE-205ENST00000521232 F6UZH7 168 aa11.75□□□□□ -0.53
SQLE-205ENST00000521232 KCNS1Q96KK3 526 aa11.75□□□□□ -0.53
SQLE-205ENST00000521232 NAGKQ9UJ70 344 aa11.75□□□□□ -0.53
SQLE-205ENST00000521232 EPDR1Q9UM22 224 aa11.75□□□□□ -0.53
SQLE-205ENST00000521232 ICOSQ9Y6W8 199 aa11.75□□□□□ -0.53
SQLE-205ENST00000521232 IGHV3-16A0A0C4DH30 117 aa11.74□□□□□ -0.53
SQLE-205ENST00000521232 A0A1W2PPQ1 181 aa11.74□□□□□ -0.53
SQLE-205ENST00000521232 A0A1W2PRE2 83 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms