RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 FMC1Q96HJ9 113 aa11.25□□□□□ -0.61
SREK1-209ENST00000520953 VGLL1Q99990 258 aa11.25□□□□□ -0.61
SREK1-209ENST00000520953 MRPL18Q9H0U6 180 aaKnown RBP11.25□□□□□ -0.61
SREK1-209ENST00000520953 SIGLEC8Q9NYZ4 499 aa11.25□□□□□ -0.61
SREK1-209ENST00000520953 IGLV1-51P01701 117 aa11.24□□□□□ -0.61
SREK1-209ENST00000520953 IGLV2-11P01706 119 aa11.24□□□□□ -0.61
SREK1-209ENST00000520953 ERCC8Q13216 396 aa11.24□□□□□ -0.61
SREK1-209ENST00000520953 ZNF124Q15973 351 aa11.24□□□□□ -0.61
SREK1-209ENST00000520953 PSG3Q16557 428 aa11.24□□□□□ -0.61
SREK1-209ENST00000520953 SMIM12Q96EX1 92 aa11.24□□□□□ -0.61
SREK1-209ENST00000520953 AGRNO00468 2067 aa11.24□□□□□ -0.61
SREK1-209ENST00000520953 SNURFLB1AK76 121 aa11.24□□□□□ -0.61
SREK1-209ENST00000520953 GATCO43716 136 aaKnown RBP11.24□□□□□ -0.61
SREK1-209ENST00000520953 LTAP01374 205 aa11.24□□□□□ -0.61
SREK1-209ENST00000520953 S100A12P80511 92 aa11.24□□□□□ -0.61
SREK1-209ENST00000520953 PSMG4Q5JS54 123 aa11.24□□□□□ -0.61
SREK1-209ENST00000520953 GDF5OSQ5U4N7 250 aa11.24□□□□□ -0.61
SREK1-209ENST00000520953 GSN-AS1Q9NRJ2 163 aa11.24□□□□□ -0.61
SREK1-209ENST00000520953 ZNF738Q8NE65 137 aa11.23□□□□□ -0.61
SREK1-209ENST00000520953 Q8TAT8 98 aa11.23□□□□□ -0.61
SREK1-209ENST00000520953 GNB1LQ9BYB4 327 aa11.23□□□□□ -0.61
SREK1-209ENST00000520953 ZNF256Q9Y2P7 627 aaPredicted RBP11.23□□□□□ -0.61
SREK1-209ENST00000520953 GRIFINA4D1Z8 144 aa11.23□□□□□ -0.61
SREK1-209ENST00000520953 IGLL1P15814 213 aa11.23□□□□□ -0.61
SREK1-209ENST00000520953 LINC00322Q6ZN03 302 aaPredicted RBP11.23□□□□□ -0.61
SREK1-209ENST00000520953 CD33P20138 364 aa11.22□□□□□ -0.61
SREK1-209ENST00000520953 MRPL54Q6P161 138 aaKnown RBP11.22□□□□□ -0.61
SREK1-209ENST00000520953 TMEM136Q6ZRR5 245 aa11.22□□□□□ -0.61
SREK1-209ENST00000520953 TMEM256Q8N2U0 113 aa11.22□□□□□ -0.61
SREK1-209ENST00000520953 Q86TA4 180 aa11.21□□□□□ -0.61
SREK1-209ENST00000520953 DNHD1Q96M86 4753 aa11.21□□□□□ -0.61
SREK1-209ENST00000520953 CSN1S1P47710 185 aa11.21□□□□□ -0.62
SREK1-209ENST00000520953 RPL19P84098 196 aaKnown RBP11.21□□□□□ -0.62
SREK1-209ENST00000520953 PRNTQ86SH4 94 aa11.21□□□□□ -0.62
SREK1-209ENST00000520953 TP53TG3Q9ULZ0 132 aa11.21□□□□□ -0.62
SREK1-209ENST00000520953 NUPR1O60356 82 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 PAFAH1B2P68402 229 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 WDR73Q6P4I2 378 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 WFDC9Q8NEX5 89 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 NAT8BQ9UHF3 227 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 C19orf71A6NCJ1 209 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 MT-ND6P03923 174 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 DEFB131AP59861 70 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 APRG1Q8IVJ8 170 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 NUP35Q8NFH5 326 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 TSKUQ8WUA8 353 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 SPAG8Q99932 426 aaPredicted RBP11.2□□□□□ -0.62
SREK1-209ENST00000520953 AGPAT4-IT1Q9H0P7 198 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 WFDC10AQ9H1F0 79 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 ZNF492Q9P255 531 aa11.2□□□□□ -0.62
SREK1-209ENST00000520953 ID1P41134 155 aa11.19□□□□□ -0.62
SREK1-209ENST00000520953 ODF3L2Q3SX64 289 aa11.19□□□□□ -0.62
SREK1-209ENST00000520953 NEU1Q99519 415 aa11.19□□□□□ -0.62
SREK1-209ENST00000520953 MAP6D1Q9H9H5 199 aa11.19□□□□□ -0.62
SREK1-209ENST00000520953 PSG8Q9UQ74 426 aa11.19□□□□□ -0.62
SREK1-209ENST00000520953 KNCNA6PVL3 124 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 CD7P09564 240 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 CRISP2P16562 243 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 LINC00310P59036 64 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 RAB4BP61018 213 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 HIST1H1AQ02539 215 aaPredicted RBP11.18□□□□□ -0.62
SREK1-209ENST00000520953 COX19Q49B96 90 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 TMEM18Q96B42 140 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 MRPL53Q96EL3 112 aaKnown RBP11.18□□□□□ -0.62
SREK1-209ENST00000520953 C8orf49Q96NF6 230 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 RPP21Q9H633 154 aaKnown RBP11.18□□□□□ -0.62
SREK1-209ENST00000520953 TRAV25A0A0B4J276 109 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 TRBV6-1A0A0K0K1D8 114 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 HIGD1CA8MV81 97 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
SREK1-209ENST00000520953 TMEM75Q8N9X5 138 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 OR8A1Q8NGG7 326 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 NOTCH1P46531 2555 aa11.18□□□□□ -0.62
SREK1-209ENST00000520953 F2Z2F3 143 aa11.17□□□□□ -0.62
SREK1-209ENST00000520953 JOSD1Q15040 202 aaPredicted RBP11.17□□□□□ -0.62
SREK1-209ENST00000520953 OXLD1Q5BKU9 147 aa11.17□□□□□ -0.62
SREK1-209ENST00000520953 C9orf66Q5T8R8 295 aa11.17□□□□□ -0.62
SREK1-209ENST00000520953 OR4C46A6NHA9 309 aa11.17□□□□□ -0.62
SREK1-209ENST00000520953 P01737 135 aa11.17□□□□□ -0.62
SREK1-209ENST00000520953 HLA-DQA1P01909 254 aa11.17□□□□□ -0.62
SREK1-209ENST00000520953 KIAA1644Q3SXP7 199 aa11.17□□□□□ -0.62
SREK1-209ENST00000520953 DNLZQ5SXM8 178 aa11.17□□□□□ -0.62
SREK1-209ENST00000520953 LINC00587B1AMM8 73 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 CT45A10P0DMU9 189 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 GZMBP10144 247 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 Q0VG73 95 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 KIR3DS1Q14943 382 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 CT83Q5H943 113 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 RASL11AQ6T310 242 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 NBEAL1Q6ZS30 2694 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 MGAM2Q2M2H8 2515 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 TRAV2A0A0B4J234 112 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 SERF1AO75920 110 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 BEAN1Q3B7T3 259 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 Q6ZQT7 251 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 GTSF1Q8WW33 167 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 ZC2HC1AQ96GY0 325 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 CLEC5AQ9NY25 188 aa11.16□□□□□ -0.62
SREK1-209ENST00000520953 DNAH3Q8TD57 4116 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms