RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 NMBP08949 121 aa8.5□□□□□ -1.05
HPS4-218ENST00000519774 AZU1P20160 251 aa8.5□□□□□ -1.05
HPS4-218ENST00000519774 ATP5G3P48201 142 aa8.5□□□□□ -1.05
HPS4-218ENST00000519774 ALKAL2Q6UX46 152 aa8.5□□□□□ -1.05
HPS4-218ENST00000519774 ZNF767PQ75MW2 155 aa8.5□□□□□ -1.05
HPS4-218ENST00000519774 ATG101Q9BSB4 218 aa8.5□□□□□ -1.05
HPS4-218ENST00000519774 NDFIP1Q9BT67 221 aa8.5□□□□□ -1.05
HPS4-218ENST00000519774 NKX6-2Q9C056 277 aaPredicted RBP8.5□□□□□ -1.05
HPS4-218ENST00000519774 LENEPQ9Y5L5 61 aa8.5□□□□□ -1.05
HPS4-218ENST00000519774 PEX7O00628 323 aa8.49□□□□□ -1.05
HPS4-218ENST00000519774 RGS13O14921 159 aa8.49□□□□□ -1.05
HPS4-218ENST00000519774 SPART-AS1P0CW21 52 aa8.49□□□□□ -1.05
HPS4-218ENST00000519774 FLI1Q01543 452 aaPredicted RBP8.49□□□□□ -1.05
HPS4-218ENST00000519774 FAM222AQ5U5X8 452 aa8.49□□□□□ -1.05
HPS4-218ENST00000519774 Q6ZQT7 251 aa8.49□□□□□ -1.05
HPS4-218ENST00000519774 PRNTQ86SH4 94 aa8.49□□□□□ -1.05
HPS4-218ENST00000519774 CCDC28AQ8IWP9 274 aa8.49□□□□□ -1.05
HPS4-218ENST00000519774 C16orf74Q96GX8 76 aa8.49□□□□□ -1.05
HPS4-218ENST00000519774 TREM1Q9NP99 234 aa8.49□□□□□ -1.05
HPS4-218ENST00000519774 PSG8Q9UQ74 426 aa8.49□□□□□ -1.05
HPS4-218ENST00000519774 ARL2-SNX15V9GYD0 113 aa8.49□□□□□ -1.05
HPS4-218ENST00000519774 TRAV34A0A0B4J273 112 aa8.48□□□□□ -1.05
HPS4-218ENST00000519774 TEX46H3BTG2 121 aa8.48□□□□□ -1.05
HPS4-218ENST00000519774 PPT1P50897 306 aa8.48□□□□□ -1.05
HPS4-218ENST00000519774 CCL20P78556 96 aa8.48□□□□□ -1.05
HPS4-218ENST00000519774 Q6ZTC4 211 aa8.48□□□□□ -1.05
HPS4-218ENST00000519774 TMEM75Q8N9X5 138 aa8.48□□□□□ -1.05
HPS4-218ENST00000519774 TMEM263Q8WUH6 116 aaKnown RBP8.48□□□□□ -1.05
HPS4-218ENST00000519774 PHLDA1Q8WV24 401 aaPredicted RBP8.48□□□□□ -1.05
HPS4-218ENST00000519774 TVP23CQ96ET8 276 aa8.48□□□□□ -1.05
HPS4-218ENST00000519774 LINC00479Q96M42 142 aa8.48□□□□□ -1.05
HPS4-218ENST00000519774 PYGO2Q9BRQ0 406 aa8.48□□□□□ -1.05
HPS4-218ENST00000519774 GNG13Q9P2W3 67 aa8.48□□□□□ -1.05
HPS4-218ENST00000519774 DKK2Q9UBU2 259 aa8.48□□□□□ -1.05
HPS4-218ENST00000519774 DNAH7Q8WXX0 4024 aa8.48□□□□□ -1.05
HPS4-218ENST00000519774 TRAV1-1A0A0B4J248 108 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 TEX48A0A1B0GUV7 120 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 PLAC8L1A1L4L8 177 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 NUPR2A6NF83 97 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 CBY3A6NI87 242 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 ZNF324O75467 553 aaPredicted RBP8.47□□□□□ -1.05
HPS4-218ENST00000519774 IGLV2-11P01706 119 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 AKR1C3P42330 323 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 C12orf74Q32Q52 190 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 MUC21Q5SSG8 566 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 ZNF493Q6ZR52 646 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 EIF4E3Q8N5X7 224 aaKnown RBP8.47□□□□□ -1.05
HPS4-218ENST00000519774 RNASE8Q8TDE3 154 aaKnown RBP8.47□□□□□ -1.05
HPS4-218ENST00000519774 HIST1H2BAQ96A08 127 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 C8orf49Q96NF6 230 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 MANBALQ9NQG1 85 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 NAGKQ9UJ70 344 aa8.47□□□□□ -1.05
HPS4-218ENST00000519774 IGHV1OR15-1A0A075B7D0 117 aa8.46□□□□□ -1.06
HPS4-218ENST00000519774 FBLL1A6NHQ2 334 aaKnown RBP8.46□□□□□ -1.06
HPS4-218ENST00000519774 C11orf94C9JXX5 98 aa8.46□□□□□ -1.06
HPS4-218ENST00000519774 DAD1P61803 113 aa8.46□□□□□ -1.06
HPS4-218ENST00000519774 UBE2G1P62253 170 aa8.46□□□□□ -1.06
HPS4-218ENST00000519774 Q6AWC8 147 aa8.46□□□□□ -1.06
HPS4-218ENST00000519774 CEMP1Q6PRD7 247 aaPredicted RBP8.46□□□□□ -1.06
HPS4-218ENST00000519774 Q86TA4 180 aa8.46□□□□□ -1.06
HPS4-218ENST00000519774 TRAV10A0A0B4J240 114 aa8.45□□□□□ -1.06
HPS4-218ENST00000519774 SCO2A0A1W2PP80 73 aa8.45□□□□□ -1.06
HPS4-218ENST00000519774 LYRM9A8MSI8 78 aa8.45□□□□□ -1.06
HPS4-218ENST00000519774 SNURFLB1AK76 121 aa8.45□□□□□ -1.06
HPS4-218ENST00000519774 GCGP01275 180 aa8.45□□□□□ -1.06
HPS4-218ENST00000519774 IFNA1P01562 189 aa8.45□□□□□ -1.06
HPS4-218ENST00000519774 DEFB130BP0DP73 79 aa8.45□□□□□ -1.06
HPS4-218ENST00000519774 DEFB130AP0DP74 79 aa8.45□□□□□ -1.06
HPS4-218ENST00000519774 FMC1Q96HJ9 113 aa8.45□□□□□ -1.06
HPS4-218ENST00000519774 LINC00467Q9BRT7 94 aa8.45□□□□□ -1.06
HPS4-218ENST00000519774 TCEAL7Q9BRU2 100 aa8.45□□□□□ -1.06
HPS4-218ENST00000519774 NOP10Q9NPE3 64 aaKnown RBP8.45□□□□□ -1.06
HPS4-218ENST00000519774 TP53TG3Q9ULZ0 132 aa8.45□□□□□ -1.06
HPS4-218ENST00000519774 TIMM8BQ9Y5J9 83 aaPredicted RBP8.45□□□□□ -1.06
HPS4-218ENST00000519774 TRAV21A0A0B4J279 112 aa8.44□□□□□ -1.06
HPS4-218ENST00000519774 HTN3P15516 51 aa8.44□□□□□ -1.06
HPS4-218ENST00000519774 BLOC1S1P78537 153 aa8.44□□□□□ -1.06
HPS4-218ENST00000519774 ANXA2RQ3ZCQ2 193 aa8.44□□□□□ -1.06
HPS4-218ENST00000519774 SMUG1Q53HV7 270 aa8.44□□□□□ -1.06
HPS4-218ENST00000519774 SAPCD1Q5SSQ6 148 aa8.44□□□□□ -1.06
HPS4-218ENST00000519774 FAM159AQ6UWV7 190 aa8.44□□□□□ -1.06
HPS4-218ENST00000519774 ZNF680Q8NEM1 530 aa8.44□□□□□ -1.06
HPS4-218ENST00000519774 GSN-AS1Q9NRJ2 163 aa8.44□□□□□ -1.06
HPS4-218ENST00000519774 KLK5Q9Y337 293 aaPredicted RBP8.44□□□□□ -1.06
HPS4-218ENST00000519774 ZNF80P51504 273 aaPredicted RBP8.43□□□□□ -1.06
HPS4-218ENST00000519774 TMEM183BQ1AE95 376 aa8.43□□□□□ -1.06
HPS4-218ENST00000519774 TMEM183AQ8IXX5 376 aa8.43□□□□□ -1.06
HPS4-218ENST00000519774 C11orf72Q8NBR9 251 aa8.43□□□□□ -1.06
HPS4-218ENST00000519774 C2CD4CQ8TF44 421 aa8.43□□□□□ -1.06
HPS4-218ENST00000519774 TRGV11A0A075B6L2 103 aa8.42□□□□□ -1.06
HPS4-218ENST00000519774 DEFB131BA0A096LNP1 70 aa8.42□□□□□ -1.06
HPS4-218ENST00000519774 BCL2P10415 239 aa8.42□□□□□ -1.06
HPS4-218ENST00000519774 ZNF415Q09FC8 603 aa8.42□□□□□ -1.06
HPS4-218ENST00000519774 KLF12Q9Y4X4 402 aa8.42□□□□□ -1.06
HPS4-218ENST00000519774 GAGE12BA1L429 117 aa8.41□□□□□ -1.06
HPS4-218ENST00000519774 IGLL5B9A064 214 aa8.41□□□□□ -1.06
HPS4-218ENST00000519774 GAGE7O76087 117 aa8.41□□□□□ -1.06
HPS4-218ENST00000519774 PFN1P07737 140 aaKnown RBP8.41□□□□□ -1.06
HPS4-218ENST00000519774 GAGE12FP0CL80 117 aa8.41□□□□□ -1.06
HPS4-218ENST00000519774 GAGE12GP0CL81 117 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms