RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 MANBALQ9NQG1 85 aa16.22■□□□□ 0.19
SKP1-206ENST00000519321 PSG8Q9UQ74 426 aa16.22■□□□□ 0.19
SKP1-206ENST00000519321 PEX7O00628 323 aa16.21■□□□□ 0.19
SKP1-206ENST00000519321 NANOS2P60321 138 aaKnown RBP16.21■□□□□ 0.19
SKP1-206ENST00000519321 PMS2P11Q13670 270 aa16.21■□□□□ 0.19
SKP1-206ENST00000519321 TREM1Q9NP99 234 aa16.21■□□□□ 0.19
SKP1-206ENST00000519321 NUPR2A6NF83 97 aa16.2■□□□□ 0.18
SKP1-206ENST00000519321 SAPCD1Q5SSQ6 148 aa16.2■□□□□ 0.18
SKP1-206ENST00000519321 PRR9Q5T870 116 aa16.2■□□□□ 0.18
SKP1-206ENST00000519321 Q6AWC8 147 aa16.2■□□□□ 0.18
SKP1-206ENST00000519321 ALKAL2Q6UX46 152 aa16.2■□□□□ 0.18
SKP1-206ENST00000519321 DKK2Q9UBU2 259 aa16.2■□□□□ 0.18
SKP1-206ENST00000519321 BOLA1Q9Y3E2 137 aa16.2■□□□□ 0.18
SKP1-206ENST00000519321 AZU1P20160 251 aa16.19■□□□□ 0.18
SKP1-206ENST00000519321 EIF4E3Q8N5X7 224 aaKnown RBP16.19■□□□□ 0.18
SKP1-206ENST00000519321 SGK494Q96LW2 274 aa16.19■□□□□ 0.18
SKP1-206ENST00000519321 CELA1Q9UNI1 258 aa16.19■□□□□ 0.18
SKP1-206ENST00000519321 LYRM9A8MSI8 78 aa16.18■□□□□ 0.18
SKP1-206ENST00000519321 C11orf94C9JXX5 98 aa16.18■□□□□ 0.18
SKP1-206ENST00000519321 RGS13O14921 159 aa16.18■□□□□ 0.18
SKP1-206ENST00000519321 IGLV2-11P01706 119 aa16.18■□□□□ 0.18
SKP1-206ENST00000519321 PRM2P04554 102 aa16.18■□□□□ 0.18
SKP1-206ENST00000519321 ATP5G3P48201 142 aa16.18■□□□□ 0.18
SKP1-206ENST00000519321 BLOC1S1P78537 153 aa16.18■□□□□ 0.18
SKP1-206ENST00000519321 FAM222AQ5U5X8 452 aa16.18■□□□□ 0.18
SKP1-206ENST00000519321 PRNTQ86SH4 94 aa16.18■□□□□ 0.18
SKP1-206ENST00000519321 ZNF680Q8NEM1 530 aa16.18■□□□□ 0.18
SKP1-206ENST00000519321 RNASE8Q8TDE3 154 aaKnown RBP16.18■□□□□ 0.18
SKP1-206ENST00000519321 TXNDC17Q9BRA2 123 aa16.18■□□□□ 0.18
SKP1-206ENST00000519321 IFNA1P01562 189 aa16.17■□□□□ 0.18
SKP1-206ENST00000519321 ANXA2RQ3ZCQ2 193 aa16.17■□□□□ 0.18
SKP1-206ENST00000519321 PHLDA1Q8WV24 401 aaPredicted RBP16.17■□□□□ 0.18
SKP1-206ENST00000519321 TVP23CQ96ET8 276 aa16.17■□□□□ 0.18
SKP1-206ENST00000519321 FMC1Q96HJ9 113 aa16.17■□□□□ 0.18
SKP1-206ENST00000519321 GNG13Q9P2W3 67 aa16.17■□□□□ 0.18
SKP1-206ENST00000519321 TIMM8BQ9Y5J9 83 aaPredicted RBP16.17■□□□□ 0.18
SKP1-206ENST00000519321 IGHV1OR15-1A0A075B7D0 117 aa16.16■□□□□ 0.18
SKP1-206ENST00000519321 TRAV21A0A0B4J279 112 aa16.16■□□□□ 0.18
SKP1-206ENST00000519321 UBE2G1P62253 170 aa16.16■□□□□ 0.18
SKP1-206ENST00000519321 CCL20P78556 96 aa16.16■□□□□ 0.18
SKP1-206ENST00000519321 CEMP1Q6PRD7 247 aaPredicted RBP16.16■□□□□ 0.18
SKP1-206ENST00000519321 KLK5Q9Y337 293 aaPredicted RBP16.16■□□□□ 0.18
SKP1-206ENST00000519321 TRAV34A0A0B4J273 112 aa16.15■□□□□ 0.18
SKP1-206ENST00000519321 PLAC8L1A1L4L8 177 aa16.15■□□□□ 0.18
SKP1-206ENST00000519321 CBY3A6NI87 242 aa16.15■□□□□ 0.18
SKP1-206ENST00000519321 SNURFLB1AK76 121 aa16.15■□□□□ 0.18
SKP1-206ENST00000519321 TAGLN2P37802 199 aaKnown RBP16.15■□□□□ 0.18
SKP1-206ENST00000519321 AKR1C3P42330 323 aa16.15■□□□□ 0.18
SKP1-206ENST00000519321 C12orf74Q32Q52 190 aa16.15■□□□□ 0.18
SKP1-206ENST00000519321 SMUG1Q53HV7 270 aa16.15■□□□□ 0.18
SKP1-206ENST00000519321 FAM159AQ6UWV7 190 aa16.15■□□□□ 0.18
SKP1-206ENST00000519321 LINC00479Q96M42 142 aa16.15■□□□□ 0.18
SKP1-206ENST00000519321 KLF12Q9Y4X4 402 aa16.15■□□□□ 0.18
SKP1-206ENST00000519321 S100A9P06702 114 aaKnown RBP16.14■□□□□ 0.17
SKP1-206ENST00000519321 ZFP30Q9Y2G7 519 aa16.14■□□□□ 0.17
SKP1-206ENST00000519321 TRAV10A0A0B4J240 114 aa16.13■□□□□ 0.17
SKP1-206ENST00000519321 TRBV6-1A0A0K0K1D8 114 aa16.13■□□□□ 0.17
SKP1-206ENST00000519321 DAD1P61803 113 aa16.13■□□□□ 0.17
SKP1-206ENST00000519321 Q6ZTC4 211 aa16.13■□□□□ 0.17
SKP1-206ENST00000519321 Q86TA4 180 aa16.13■□□□□ 0.17
SKP1-206ENST00000519321 TMEM183BQ1AE95 376 aa16.12■□□□□ 0.17
SKP1-206ENST00000519321 IBA57Q5T440 356 aaKnown RBP16.12■□□□□ 0.17
SKP1-206ENST00000519321 C8orf49Q96NF6 230 aa16.12■□□□□ 0.17
SKP1-206ENST00000519321 DNAH7Q8WXX0 4024 aa16.11■□□□□ 0.17
SKP1-206ENST00000519321 GCGP01275 180 aa16.11■□□□□ 0.17
SKP1-206ENST00000519321 TDRG1Q3Y452 100 aa16.11■□□□□ 0.17
SKP1-206ENST00000519321 Q6ZQT7 251 aa16.11■□□□□ 0.17
SKP1-206ENST00000519321 KCNS1Q96KK3 526 aa16.11■□□□□ 0.17
SKP1-206ENST00000519321 NOP10Q9NPE3 64 aaKnown RBP16.11■□□□□ 0.17
SKP1-206ENST00000519321 TRGV11A0A075B6L2 103 aa16.1■□□□□ 0.17
SKP1-206ENST00000519321 SCO2A0A1W2PP80 73 aa16.1■□□□□ 0.17
SKP1-206ENST00000519321 PFN1P07737 140 aaKnown RBP16.1■□□□□ 0.17
SKP1-206ENST00000519321 DAZ2Q13117 558 aaKnown RBP16.1■□□□□ 0.17
SKP1-206ENST00000519321 MUC21Q5SSG8 566 aa16.1■□□□□ 0.17
SKP1-206ENST00000519321 ZNF767PQ75MW2 155 aa16.1■□□□□ 0.17
SKP1-206ENST00000519321 C2CD4CQ8TF44 421 aa16.1■□□□□ 0.17
SKP1-206ENST00000519321 BCL2P10415 239 aa16.09■□□□□ 0.17
SKP1-206ENST00000519321 MEF2BQ02080 365 aaPredicted RBP16.09■□□□□ 0.17
SKP1-206ENST00000519321 ZNF415Q09FC8 603 aa16.09■□□□□ 0.17
SKP1-206ENST00000519321 C11orf72Q8NBR9 251 aa16.09■□□□□ 0.17
SKP1-206ENST00000519321 NAGKQ9UJ70 344 aa16.09■□□□□ 0.17
SKP1-206ENST00000519321 DEFB131BA0A096LNP1 70 aa16.08■□□□□ 0.16
SKP1-206ENST00000519321 PDE6DO43924 150 aa16.08■□□□□ 0.16
SKP1-206ENST00000519321 LTAP01374 205 aa16.08■□□□□ 0.16
SKP1-206ENST00000519321 TCL1AP56279 114 aa16.08■□□□□ 0.16
SKP1-206ENST00000519321 COX8CQ7Z4L0 72 aa16.08■□□□□ 0.16
SKP1-206ENST00000519321 LYPD6BQ8NI32 183 aa16.08■□□□□ 0.16
SKP1-206ENST00000519321 C11orf52Q96A22 123 aa16.08■□□□□ 0.16
SKP1-206ENST00000519321 GSN-AS1Q9NRJ2 163 aa16.08■□□□□ 0.16
SKP1-206ENST00000519321 VAX2Q9UIW0 290 aa16.08■□□□□ 0.16
SKP1-206ENST00000519321 DEFB130BP0DP73 79 aa16.07■□□□□ 0.16
SKP1-206ENST00000519321 DEFB130AP0DP74 79 aa16.07■□□□□ 0.16
SKP1-206ENST00000519321 ZNF80P51504 273 aaPredicted RBP16.07■□□□□ 0.16
SKP1-206ENST00000519321 SDF2L1Q9HCN8 221 aa16.07■□□□□ 0.16
SKP1-206ENST00000519321 TP53TG3Q9ULZ0 132 aa16.07■□□□□ 0.16
SKP1-206ENST00000519321 FABP5P3A8MUU1 101 aa16.06■□□□□ 0.16
SKP1-206ENST00000519321 TCTAP57738 103 aa16.06■□□□□ 0.16
SKP1-206ENST00000519321 TEX261Q6UWH6 196 aa16.06■□□□□ 0.16
SKP1-206ENST00000519321 TMEM183AQ8IXX5 376 aa16.05■□□□□ 0.16
SKP1-206ENST00000519321 LINC00612Q8N6U2 182 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms