RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 PCP2Q8IVA1 136 aa6.48□□□□□ -1.37
CTNNA1-210ENST00000518825 TMEM238C9JI98 176 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 C19orf84I3L1E1 186 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 NDUFS8O00217 210 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 C19orf54Q5BKX5 351 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 PRR9Q5T870 116 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 AMMECR1LQ6DCA0 310 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 TMEM219Q86XT9 240 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 C5orf56Q8N8D9 126 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 PIFOQ8TCI5 191 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 IFI27L1Q96BM0 104 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 LINC00527Q9UJ94 153 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 U3KQE9 123 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 RBAKDNA6NC62 111 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 FBLL1A6NHQ2 334 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 CD5LO43866 347 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 GOSR1O95249 250 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 TNFRSF6BO95407 300 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 RPS20P60866 119 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 VAMP3Q15836 100 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 ADAMTSL5Q6ZMM2 481 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 DPF1Q92782 380 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 C18orf15Q96N68 181 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 NPFFR1Q9GZQ6 430 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 UBTD1Q9HAC8 227 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 FLNCQ14315 2725 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 IGKV2D-26A0A0A0MRZ7 120 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 NHLH1Q02575 133 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 C8orf86Q6ZUL3 223 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 HHLA3Q9XRX5 114 aa6.47□□□□□ -1.37
CTNNA1-210ENST00000518825 GPHB5Q86YW7 130 aa6.46□□□□□ -1.37
CTNNA1-210ENST00000518825 C20orf173Q96LM9 149 aa6.46□□□□□ -1.37
CTNNA1-210ENST00000518825 SPTAN1Q13813 2472 aaKnown RBP6.46□□□□□ -1.37
CTNNA1-210ENST00000518825 TRAV26-2A0A0B4J265 109 aa6.46□□□□□ -1.38
CTNNA1-210ENST00000518825 LY6DQ14210 128 aa6.46□□□□□ -1.38
CTNNA1-210ENST00000518825 TMEM97Q5BJF2 176 aa6.46□□□□□ -1.38
CTNNA1-210ENST00000518825 TTTY13Q9BZ97 58 aa6.46□□□□□ -1.38
CTNNA1-210ENST00000518825 ZMAT4Q9H898 229 aa6.46□□□□□ -1.38
CTNNA1-210ENST00000518825 IGHV3OR16-10A0A075B7F0 116 aa6.46□□□□□ -1.38
CTNNA1-210ENST00000518825 NPFFO15130 113 aa6.46□□□□□ -1.38
CTNNA1-210ENST00000518825 TRBV12-3P01733 135 aa6.46□□□□□ -1.38
CTNNA1-210ENST00000518825 EFNA4P52798 201 aa6.46□□□□□ -1.38
CTNNA1-210ENST00000518825 DEFB1P60022 68 aa6.46□□□□□ -1.38
CTNNA1-210ENST00000518825 SPRY2O43597 315 aa6.45□□□□□ -1.38
CTNNA1-210ENST00000518825 LEPP41159 167 aa6.45□□□□□ -1.38
CTNNA1-210ENST00000518825 ODF1Q14990 250 aa6.45□□□□□ -1.38
CTNNA1-210ENST00000518825 NRACQ8N912 160 aa6.45□□□□□ -1.38
CTNNA1-210ENST00000518825 OR4C5Q8NGB2 326 aa6.45□□□□□ -1.38
CTNNA1-210ENST00000518825 OR1N2Q8NGR9 330 aa6.45□□□□□ -1.38
CTNNA1-210ENST00000518825 JMJD8Q96S16 334 aa6.45□□□□□ -1.38
CTNNA1-210ENST00000518825 SMAD7O15105 426 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-210ENST00000518825 UQCRFS1P47985 274 aa6.45□□□□□ -1.38
CTNNA1-210ENST00000518825 UNQ9165/PRO28630Q6UXU0 137 aa6.45□□□□□ -1.38
CTNNA1-210ENST00000518825 C7orf71A4D174 169 aa6.45□□□□□ -1.38
CTNNA1-210ENST00000518825 C9orf47Q6ZRZ4 202 aa6.45□□□□□ -1.38
CTNNA1-210ENST00000518825 SLC50A1Q9BRV3 221 aa6.45□□□□□ -1.38
CTNNA1-210ENST00000518825 FCER1GP30273 86 aa6.44□□□□□ -1.38
CTNNA1-210ENST00000518825 UCNP55089 124 aa6.44□□□□□ -1.38
CTNNA1-210ENST00000518825 ITLN2Q8WWU7 325 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-210ENST00000518825 MAP1LC3AQ9H492 121 aa6.44□□□□□ -1.38
CTNNA1-210ENST00000518825 SELENOKQ9Y6D0 94 aa6.44□□□□□ -1.38
CTNNA1-210ENST00000518825 TRBV7-1A0A0A6YYK4 115 aa6.44□□□□□ -1.38
CTNNA1-210ENST00000518825 TMEM158Q8WZ71 300 aa6.44□□□□□ -1.38
CTNNA1-210ENST00000518825 SCGB2A1O75556 95 aa6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 IGHV4-39P01824 125 aa6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 PPBPP02775 128 aa6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 RIPPLY3P57055 190 aa6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 BRD3OSQ6XYD6 125 aa6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 GLMPQ8WWB7 406 aa6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 EEF1AKMT3Q96AZ1 226 aa6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 NAA38Q9BRA0 125 aaKnown RBP6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 RAB9AP51151 201 aa6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 NMUP48645 174 aa6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 Q6ZS46 218 aa6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 OR2K2Q8NGT1 345 aa6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 METTL26Q96S19 204 aa6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 COL25A1Q9BXS0 654 aaPredicted RBP6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 ZANQ9Y493 2812 aa6.43□□□□□ -1.38
CTNNA1-210ENST00000518825 IGHV4-4A0A075B6R2 117 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 SOCS3O14543 225 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 SEC11AP67812 179 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 KIR3DS1Q14943 382 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 UFSP1Q6NVU6 142 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 Q8N8P6 123 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 NXT2Q9NPJ8 142 aaKnown RBP6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 TRAV41A0A0B4J266 112 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 ATP5G2Q06055 141 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 TMEM78Q5T7P6 136 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 MRPL53Q96EL3 112 aaKnown RBP6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 CST9LQ9H4G1 147 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 A1L4Q6 167 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 SIVA1O15304 175 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 CDKN1BP46527 198 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 ZFAND2AQ8N6M9 145 aa6.42□□□□□ -1.38
CTNNA1-210ENST00000518825 CRIP2P52943 208 aaPredicted RBP6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 KLK15Q9H2R5 256 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 PEF1Q9UBV8 284 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 GAGE12BA1L429 117 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 RNF223E7ERA6 249 aa6.41□□□□□ -1.38
CTNNA1-210ENST00000518825 H3BVH4 76 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms