RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 DISC1C4P0D8 188 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 SH2D1AO60880 128 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 KRT75O95678 551 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 OR13C7P0DN81 318 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 ORM2P19652 201 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 HSD11B1P28845 292 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 ERP29P30040 261 aaKnown RBP2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 RBX1P62877 108 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 COMMD7Q86VX2 200 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 TMEM75Q8N9X5 138 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 OR4B1Q8NGF8 309 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 Q8WTZ3 238 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 MAL2Q969L2 176 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 PPP3R2Q96LZ3 170 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 RTBDNQ9BSG5 229 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 GNB1LQ9BYB4 327 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 OR51V1Q9H2C8 321 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 WASHC3Q9Y3C0 194 aa2.65□□□□□ -1.99
HMGB1P23-201ENST00000518743 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 LINC00862A6NCI5 91 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 A8MWP4 228 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 A8MWP6 167 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 H3BMM0 161 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 TPST1O60507 370 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 CTSDP07339 412 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 APELAP0DMC3 54 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 RPS27P42677 84 aaKnown RBP2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 RPS11P62280 158 aaKnown RBP eCLIP2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 RHOGP84095 191 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 KRR1Q13601 381 aaKnown RBP2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 MOBPQ13875 183 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 FXYD3Q14802 87 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 MESTQ5EB52 335 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 C3orf62Q6ZUJ4 267 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 UBE2WQ96B02 151 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 Q96M85 177 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 PHB2Q99623 299 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 UPK3BQ9BT76 320 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 DUSP21Q9H596 190 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 MRPL27Q9P0M9 148 aaKnown RBP2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 MRPS16Q9Y3D3 137 aaKnown RBP2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 PHLDA3Q9Y5J5 127 aa2.64□□□□□ -1.99
HMGB1P23-201ENST00000518743 PRORSD1PA6NEY8 169 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 H3BQF6 201 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 MT-CO2P00403 227 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 IGLV3-1P01715 115 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 CGB7P0DN87 165 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 HIST1H1EP10412 219 aaKnown RBP2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 AZU1P20160 251 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 CRABP1P29762 137 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 SULT1A1P50225 295 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 RAB5BP61020 215 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 CTAG1AP78358 180 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 HLA-DRB3P79483 266 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 MRPS25P82663 173 aaKnown RBP2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 IBA57Q5T440 356 aaKnown RBP2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 OR10K2Q6IF99 312 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 DHRS4L2Q6PKH6 230 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 ATP5L2Q7Z4Y8 100 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 GPHB5Q86YW7 130 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 GID4Q8IVV7 300 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 HS3ST5Q8IZT8 346 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 C1orf64Q8NEQ6 169 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 OR5A2Q8NGI9 324 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 CPNE2Q96FN4 548 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 CEP19Q96LK0 163 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 SLC2A9Q9NRM0 540 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 ZNF230Q9UIE0 474 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 UFC1Q9Y3C8 167 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 V9GYQ6 96 aa2.63□□□□□ -1.99
HMGB1P23-201ENST00000518743 IGKV1OR2-108A0A075B7D4 117 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 MEIKINA0A087WXM9 373 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 TRAV26-2A0A0B4J265 109 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 A0A0B4J2C4 111 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 A6NED7 52 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 FAM223BA6NKX1 122 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 KRTAP9-6A8MVA2 160 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 SDCBPO00560 298 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 ATP5HO75947 161 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 NDUFA3O95167 84 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 PRH1P02810 166 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 DEFB130BP0DP73 79 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 DEFB130AP0DP74 79 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 IFI30P13284 250 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 CXCL3P19876 107 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 DEFB131AP59861 70 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 ESRGQ1W209 222 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 C10orf91Q5T1B1 145 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 C1orf195Q5TG92 126 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 IGFL1Q6UW32 110 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 FAM223AQ8IWN6 122 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 GPR32P1Q8NGA4 272 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 OR2D3Q8NGH3 330 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 LZICQ8WZA0 190 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 SLAMF6Q96DU3 332 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 GNPNAT1Q96EK6 184 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 NKX6-2Q9C056 277 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 METTL1Q9UBP6 276 aaKnown RBP2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 MED31Q9Y3C7 131 aa2.62□□□□□ -1.99
HMGB1P23-201ENST00000518743 A0A0D9SG52 128 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms