RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 DERL1Q9BUN8 251 aa8.38□□□□□ -1.07
ARFGEF1-202ENST00000517955 C1QTNF4Q9BXJ3 329 aa8.38□□□□□ -1.07
ARFGEF1-202ENST00000517955 CSTL1Q9H114 145 aa8.38□□□□□ -1.07
ARFGEF1-202ENST00000517955 TREM1Q9NP99 234 aa8.38□□□□□ -1.07
ARFGEF1-202ENST00000517955 TRBV20OR9-2A0A075B6H5 130 aa8.37□□□□□ -1.07
ARFGEF1-202ENST00000517955 CRXO43186 299 aaPredicted RBP8.37□□□□□ -1.07
ARFGEF1-202ENST00000517955 APOC4P55056 127 aa8.37□□□□□ -1.07
ARFGEF1-202ENST00000517955 SOHLH1Q5JUK2 328 aa8.37□□□□□ -1.07
ARFGEF1-202ENST00000517955 PRNTQ86SH4 94 aa8.37□□□□□ -1.07
ARFGEF1-202ENST00000517955 BAGE2Q86Y30 109 aa8.37□□□□□ -1.07
ARFGEF1-202ENST00000517955 C20orf144Q9BQM9 153 aa8.37□□□□□ -1.07
ARFGEF1-202ENST00000517955 TMEM218A2RU14 115 aa8.36□□□□□ -1.07
ARFGEF1-202ENST00000517955 IGKV3-20P01619 116 aa8.36□□□□□ -1.07
ARFGEF1-202ENST00000517955 IGLV2-8P01709 118 aa8.36□□□□□ -1.07
ARFGEF1-202ENST00000517955 PRB4P10163 310 aaPredicted RBP8.36□□□□□ -1.07
ARFGEF1-202ENST00000517955 GNG4P50150 75 aa8.36□□□□□ -1.07
ARFGEF1-202ENST00000517955 CENPWQ5EE01 88 aa8.36□□□□□ -1.07
ARFGEF1-202ENST00000517955 Q6AWC8 147 aa8.36□□□□□ -1.07
ARFGEF1-202ENST00000517955 CSNK1G2-AS1Q8NCQ2 148 aa8.36□□□□□ -1.07
ARFGEF1-202ENST00000517955 Q8TAT8 98 aa8.36□□□□□ -1.07
ARFGEF1-202ENST00000517955 SGK494Q96LW2 274 aa8.36□□□□□ -1.07
ARFGEF1-202ENST00000517955 SMIM7Q9BQ49 75 aa8.36□□□□□ -1.07
ARFGEF1-202ENST00000517955 ZNF727A8MUV8 499 aa8.35□□□□□ -1.07
ARFGEF1-202ENST00000517955 ZNF324O75467 553 aaPredicted RBP8.35□□□□□ -1.07
ARFGEF1-202ENST00000517955 GPX1P07203 203 aa8.35□□□□□ -1.07
ARFGEF1-202ENST00000517955 SFTA3P0C7M3 94 aa8.35□□□□□ -1.07
ARFGEF1-202ENST00000517955 FRMD6-AS1P0C7T7 363 aa8.35□□□□□ -1.07
ARFGEF1-202ENST00000517955 RPL35AP18077 110 aaKnown RBP8.35□□□□□ -1.07
ARFGEF1-202ENST00000517955 SPINK13Q1W4C9 94 aa8.35□□□□□ -1.07
ARFGEF1-202ENST00000517955 ZNF674Q2M3X9 581 aa8.35□□□□□ -1.07
ARFGEF1-202ENST00000517955 SMUG1Q53HV7 270 aa8.35□□□□□ -1.07
ARFGEF1-202ENST00000517955 C10orf91Q5T1B1 145 aa8.35□□□□□ -1.07
ARFGEF1-202ENST00000517955 Q6ZWC4 215 aa8.35□□□□□ -1.07
ARFGEF1-202ENST00000517955 ASCL2Q99929 193 aa8.35□□□□□ -1.07
ARFGEF1-202ENST00000517955 BIN3Q9NQY0 253 aa8.35□□□□□ -1.07
ARFGEF1-202ENST00000517955 C7orf71A4D174 169 aa8.34□□□□□ -1.07
ARFGEF1-202ENST00000517955 M0R2Z0 102 aa8.34□□□□□ -1.07
ARFGEF1-202ENST00000517955 PRB2P02812 416 aaPredicted RBP8.34□□□□□ -1.07
ARFGEF1-202ENST00000517955 TMEM241Q24JQ0 296 aa8.34□□□□□ -1.07
ARFGEF1-202ENST00000517955 GFI1BQ5VTD9 330 aa8.34□□□□□ -1.07
ARFGEF1-202ENST00000517955 TMEM256Q8N2U0 113 aa8.34□□□□□ -1.07
ARFGEF1-202ENST00000517955 OCC1Q8TAD7 63 aa8.34□□□□□ -1.07
ARFGEF1-202ENST00000517955 C8orf49Q96NF6 230 aa8.34□□□□□ -1.07
ARFGEF1-202ENST00000517955 LINC00467Q9BRT7 94 aa8.34□□□□□ -1.07
ARFGEF1-202ENST00000517955 SEC11CQ9BY50 192 aa8.34□□□□□ -1.07
ARFGEF1-202ENST00000517955 NAT8Q9UHE5 227 aa8.34□□□□□ -1.07
ARFGEF1-202ENST00000517955 TRAV21A0A0B4J279 112 aa8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 FABP5P3A8MUU1 101 aa8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 CA1P00915 261 aaPredicted RBP8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 GCGP01275 180 aa8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 INSP01308 110 aa8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 PFN1P07737 140 aaKnown RBP8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 CRIP1P50238 77 aa8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 CEBPGP53567 150 aa8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 KIR3DS1Q14943 382 aa8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 PRR9Q5T870 116 aa8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 LINC01551Q86U37 167 aa8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 ZC2HC1AQ96GY0 325 aa8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 NIPSNAP3BQ9BS92 247 aa8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 SDF2L1Q9HCN8 221 aa8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 TP53TG1Q9Y2A0 90 aa8.33□□□□□ -1.08
ARFGEF1-202ENST00000517955 KRBOX1C9JBD0 128 aa8.32□□□□□ -1.08
ARFGEF1-202ENST00000517955 H7BYZ3 331 aa8.32□□□□□ -1.08
ARFGEF1-202ENST00000517955 RNASE4P34096 147 aaKnown RBP8.32□□□□□ -1.08
ARFGEF1-202ENST00000517955 ZNF80P51504 273 aaPredicted RBP8.32□□□□□ -1.08
ARFGEF1-202ENST00000517955 TDRG1Q3Y452 100 aa8.32□□□□□ -1.08
ARFGEF1-202ENST00000517955 FAM162BQ5T6X4 162 aa8.32□□□□□ -1.08
ARFGEF1-202ENST00000517955 ZNF705AQ6ZN79 300 aaPredicted RBP8.32□□□□□ -1.08
ARFGEF1-202ENST00000517955 C1orf158Q8N1D5 194 aa8.32□□□□□ -1.08
ARFGEF1-202ENST00000517955 NEU1Q99519 415 aa8.32□□□□□ -1.08
ARFGEF1-202ENST00000517955 XCL2Q9UBD3 114 aa8.32□□□□□ -1.08
ARFGEF1-202ENST00000517955 MEGF8Q7Z7M0 2845 aa8.32□□□□□ -1.08
ARFGEF1-202ENST00000517955 TRAV12-2A0A075B6T6 113 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 C19orf71A6NCJ1 209 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 K7EN84 100 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 RBMY1A1P0DJD3 496 aaKnown RBP8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 RBMY1CP0DJD4 496 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 ADCYAP1P18509 176 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 FXYD7P58549 80 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 RPL23P62829 140 aaKnown RBP8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 PNRC1Q12796 327 aaPredicted RBP8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 BTN1A1Q13410 526 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 RBMY1FQ15415 496 aaKnown RBP8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 DEFB121Q5J5C9 76 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 FAM231DQ6ZW35 169 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 SLC7A5P1Q8MH63 180 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 MRAPQ8TCY5 172 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 RNF183Q96D59 192 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 PYGO2Q9BRQ0 406 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 CARHSP1Q9Y2V2 147 aaKnown RBP8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 GOLT1BQ9Y3E0 138 aa8.31□□□□□ -1.08
ARFGEF1-202ENST00000517955 TRAV12-3A0A0B4J271 114 aa8.3□□□□□ -1.08
ARFGEF1-202ENST00000517955 PGPEP1LA6NFU8 196 aa8.3□□□□□ -1.08
ARFGEF1-202ENST00000517955 SMIM9A6NGZ8 99 aa8.3□□□□□ -1.08
ARFGEF1-202ENST00000517955 F8W036 122 aa8.3□□□□□ -1.08
ARFGEF1-202ENST00000517955 DEFA6Q01524 100 aa8.3□□□□□ -1.08
ARFGEF1-202ENST00000517955 NHLRC2Q8NBF2 726 aa8.3□□□□□ -1.08
ARFGEF1-202ENST00000517955 B9D2Q9BPU9 175 aa8.3□□□□□ -1.08
ARFGEF1-202ENST00000517955 TM2D3Q9BRN9 247 aa8.3□□□□□ -1.08
ARFGEF1-202ENST00000517955 TP53TG3Q9ULZ0 132 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms