RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 C16orf54Q6UWD8 224 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 RPRMQ9NS64 109 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 ZNF586Q9NXT0 402 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 TEX48A0A1B0GUV7 120 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 LOC102723971A0A1B0GUV8 181 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 SMIM9A6NGZ8 99 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 ZNF98A6NK75 572 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 H3BMM0 161 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 H3BRN7 92 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 MBP02144 154 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 SRP19P09132 144 aaKnown RBP6.29□□□□□ -1.4
NUP54-211ENST00000512151 TAGLN2P37802 199 aaKnown RBP6.29□□□□□ -1.4
NUP54-211ENST00000512151 ZNF726P1Q15940 193 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 KHDC3LQ587J8 217 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 TTC32Q5I0X7 151 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 PSMG4Q5JS54 123 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 LINC00305Q7Z4B0 112 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 ZNF709Q8N972 641 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 OR10G4Q8NGN3 311 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 SFT2D1Q8WV19 159 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 GLMPQ8WWB7 406 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 METTL26Q96S19 204 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 C1QTNF4Q9BXJ3 329 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 SLC25A39Q9BZJ4 359 aaPredicted RBP6.29□□□□□ -1.4
NUP54-211ENST00000512151 SEPSECSQ9HD40 501 aaKnown RBP6.29□□□□□ -1.4
NUP54-211ENST00000512151 DNAJC4Q9NNZ3 241 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 HIGD1AQ9Y241 93 aa6.29□□□□□ -1.4
NUP54-211ENST00000512151 MRPS12O15235 138 aaKnown RBP6.28□□□□□ -1.4
NUP54-211ENST00000512151 COX7A2P2O60397 106 aa6.28□□□□□ -1.4
NUP54-211ENST00000512151 RHEBQ15382 184 aa6.28□□□□□ -1.4
NUP54-211ENST00000512151 FAM78BQ5VT40 261 aa6.28□□□□□ -1.4
NUP54-211ENST00000512151 C10orf113Q5VZT2 155 aa6.28□□□□□ -1.4
NUP54-211ENST00000512151 MIR17HGQ75NE6 70 aa6.28□□□□□ -1.4
NUP54-211ENST00000512151 CBLN2Q8IUK8 224 aa6.28□□□□□ -1.4
NUP54-211ENST00000512151 OR1L4Q8NGR5 311 aa6.28□□□□□ -1.4
NUP54-211ENST00000512151 SHANK2-AS3Q9BTD1 123 aa6.28□□□□□ -1.4
NUP54-211ENST00000512151 SMCO4Q9NRQ5 59 aa6.28□□□□□ -1.4
NUP54-211ENST00000512151 CTXND1A0A1B0GTU2 59 aa6.27□□□□□ -1.41
NUP54-211ENST00000512151 A0A1B0GV50 99 aa6.27□□□□□ -1.41
NUP54-211ENST00000512151 IFNA1P01562 189 aa6.27□□□□□ -1.41
NUP54-211ENST00000512151 BCL2P10415 239 aa6.27□□□□□ -1.41
NUP54-211ENST00000512151 DEFB1P60022 68 aa6.27□□□□□ -1.41
NUP54-211ENST00000512151 ACOT6Q3I5F7 207 aaPredicted RBP6.27□□□□□ -1.41
NUP54-211ENST00000512151 FAM122CQ6P4D5 195 aa6.27□□□□□ -1.41
NUP54-211ENST00000512151 OR10G9Q8NGN4 311 aa6.27□□□□□ -1.41
NUP54-211ENST00000512151 OR10G7Q8NGN6 311 aa6.27□□□□□ -1.41
NUP54-211ENST00000512151 FAM167A-AS1Q96KT0 104 aa6.27□□□□□ -1.41
NUP54-211ENST00000512151 PFDN5Q99471 154 aa6.27□□□□□ -1.41
NUP54-211ENST00000512151 SLC25A22Q9H936 323 aa6.27□□□□□ -1.41
NUP54-211ENST00000512151 KCNIP2Q9NS61 270 aa6.27□□□□□ -1.41
NUP54-211ENST00000512151 TNFRSF18Q9Y5U5 241 aa6.27□□□□□ -1.41
NUP54-211ENST00000512151 A0A1W2PPQ1 181 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 A0A1W2PS18 150 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 C7orf77A4D0Y5 90 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 MAP1LC3B2A6NCE7 125 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 F5H768 121 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 HMGB3O15347 200 aaKnown RBP6.26□□□□□ -1.41
NUP54-211ENST00000512151 SNRPCP09234 159 aaKnown RBP6.26□□□□□ -1.41
NUP54-211ENST00000512151 GCSHP23434 173 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 NUTF2P61970 127 aaKnown RBP6.26□□□□□ -1.41
NUP54-211ENST00000512151 C1orf194Q5T5A4 169 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 GDF5OSQ5U4N7 250 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 LCN15Q6UWW0 184 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 C1orf158Q8N1D5 194 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 C15orf54Q8N8G6 183 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 DEFB104AQ8WTQ1 72 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 SLC25A2Q9BXI2 301 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 MAP1LC3BQ9GZQ8 125 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 FAM30AQ9NZY2 134 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 FUT9Q9Y231 359 aa6.26□□□□□ -1.41
NUP54-211ENST00000512151 COLCA2A8K830 154 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 IGKV3-20P01619 116 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 PRM2P04554 102 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 PYYP10082 97 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 ERVFC1-1P60608 527 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 RHOBP62745 196 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 FLI1Q01543 452 aaPredicted RBP6.25□□□□□ -1.41
NUP54-211ENST00000512151 SIGLEC15Q6ZMC9 328 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 OR8I2Q8N0Y5 310 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 CYB561D1Q8N8Q1 229 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 RXFP4Q8TDU9 374 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 RAB24Q969Q5 203 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 MRPL32Q9BYC8 188 aaKnown RBP6.25□□□□□ -1.41
NUP54-211ENST00000512151 ACTR3CQ9C0K3 210 aaPredicted RBP6.25□□□□□ -1.41
NUP54-211ENST00000512151 RPS10P5Q9NQ39 176 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 GNG13Q9P2W3 67 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 VAX2Q9UIW0 290 aa6.25□□□□□ -1.41
NUP54-211ENST00000512151 A0A087WTM6 91 aa6.24□□□□□ -1.41
NUP54-211ENST00000512151 A0A087WWC5 75 aa6.24□□□□□ -1.41
NUP54-211ENST00000512151 HELTA6NFD8 242 aa6.24□□□□□ -1.41
NUP54-211ENST00000512151 H3BQ15 152 aa6.24□□□□□ -1.41
NUP54-211ENST00000512151 H3BTX0 84 aa6.24□□□□□ -1.41
NUP54-211ENST00000512151 M0R036 132 aa6.24□□□□□ -1.41
NUP54-211ENST00000512151 EREGO14944 169 aa6.24□□□□□ -1.41
NUP54-211ENST00000512151 OXTP01178 125 aa6.24□□□□□ -1.41
NUP54-211ENST00000512151 STAG3L2P0CL84 134 aa6.24□□□□□ -1.41
NUP54-211ENST00000512151 STAG3L3P0CL85 134 aa6.24□□□□□ -1.41
NUP54-211ENST00000512151 HLA-DRB4P13762 266 aa6.24□□□□□ -1.41
NUP54-211ENST00000512151 CDC34P49427 236 aaPredicted RBP6.24□□□□□ -1.41
NUP54-211ENST00000512151 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms