RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 MORN5Q5VZ52 161 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 BOD1L2Q8IYS8 172 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 IGKV1D-8A0A087WSZ0 117 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 IGHV4-28A0A0C4DH34 117 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 A0A1B0GW64 132 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 RNF222A6NCQ9 220 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 NTF4P34130 210 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 MLANAQ16655 118 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 C9orf153Q5TBE3 101 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 C8orf31Q8N9H6 132 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 TINCRA0A1B0GVN0 87 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 LRCOL1A6NCL2 159 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 GYPEP15421 78 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 MPV17L2Q567V2 206 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 FOXI2Q6ZQN5 318 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 GLRX5Q86SX6 157 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 hDV102S1A0JD36 115 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 DEFB136Q30KP8 78 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 IGFL3Q6UXB1 125 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 CFHR4Q92496 578 aa4.61□□□□□ -1.67
USP38-203ENST00000511739 MRPL53Q96EL3 112 aaKnown RBP4.61□□□□□ -1.67
USP38-203ENST00000511739 A0A0A6YYD4 124 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 C5orf63A6NC05 138 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 ZNF124Q15973 351 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 LHFPL1Q86WI0 220 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 RNF126Q9BV68 326 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 PNRC2Q9NPJ4 139 aaKnown RBP4.6□□□□□ -1.67
USP38-203ENST00000511739 ZNF407Q9C0G0 2248 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 ZNF134P52741 427 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 Q6P435 159 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 RNF138Q8WVD3 245 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 IGLV10-54A0A075B6I4 117 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 IGKV1-27A0A075B6S5 117 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 TRACP01848 142 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 UTF1Q5T230 341 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 TMEM75Q8N9X5 138 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 ESM1Q9NQ30 184 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 ZNRD1Q9P1U0 126 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 KIAA1549LQ6ZVL6 1849 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 LINC00205P59089 165 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 ATP6V0E2Q8NHE4 81 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 PYGO2Q9BRQ0 406 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 A0A087X0K7 114 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 H3BUA1 57 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 SPINK8P0C7L1 97 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 QRFPP83859 136 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 SRSF2Q01130 221 aaKnown RBP4.6□□□□□ -1.67
USP38-203ENST00000511739 TEX36Q5VZQ5 186 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 C9orf47Q6ZRZ4 202 aa4.6□□□□□ -1.67
USP38-203ENST00000511739 TMEM213A2RRL7 107 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 F6UB75 175 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 C5orf38Q86SI9 138 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 C16orf74Q96GX8 76 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 WFDC1Q9HC57 220 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 PKDREJQ9NTG1 2253 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 CACNA1HO95180 2353 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 B3GALT5-AS1P59052 145 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 RNASE13Q5GAN3 156 aaKnown RBP4.59□□□□□ -1.67
USP38-203ENST00000511739 LY6G6FQ5SQ64 297 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 TMEM14EPQ6UXP3 125 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 Q6ZS49 121 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 FNDC10F2Z333 226 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 FAM120AOSQ5T036 256 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 APRG1Q8IVJ8 170 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 WIPF2Q8TF74 440 aaPredicted RBP4.59□□□□□ -1.67
USP38-203ENST00000511739 SYS1-DBNDD2H3BUS1 97 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 LINC01551Q86U37 167 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 Q8N8P6 123 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 Q8TCH9 128 aa4.59□□□□□ -1.67
USP38-203ENST00000511739 KLF2Q9Y5W3 355 aaPredicted RBP4.59□□□□□ -1.67
USP38-203ENST00000511739 TRAV4A0A0B4J268 109 aa4.59□□□□□ -1.68
USP38-203ENST00000511739 PRSS46E5RG02 174 aa4.59□□□□□ -1.68
USP38-203ENST00000511739 ZFP36P26651 326 aaKnown RBP4.59□□□□□ -1.68
USP38-203ENST00000511739 OR11H6Q8NGC7 330 aa4.59□□□□□ -1.68
USP38-203ENST00000511739 GFRA4Q9GZZ7 299 aa4.59□□□□□ -1.68
USP38-203ENST00000511739 C14orf132Q9NPU4 83 aa4.59□□□□□ -1.68
USP38-203ENST00000511739 LY96Q9Y6Y9 160 aa4.59□□□□□ -1.68
USP38-203ENST00000511739 TRBV6-6A0A0A6YYG2 114 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 LY6G6EA0A0G2JKS1 128 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 COX7A2LO14548 114 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 SLURP1P55000 103 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 MP68P56378 58 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 KIR3DS1Q14943 382 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 KLHDC3Q9BQ90 382 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 U3KQA8 63 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 C15orf62A8K5M9 175 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 LOXP28300 417 aaPredicted RBP4.58□□□□□ -1.68
USP38-203ENST00000511739 FOXE3Q13461 319 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 C14orf177Q52M58 125 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 ZNF493Q6ZR52 646 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 TRAV26-2A0A0B4J265 109 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.58□□□□□ -1.68
USP38-203ENST00000511739 AMTNQ6UX39 209 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 RNF144BQ7Z419 303 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 GTSF1Q8WW33 167 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 TRBV19A0A075B6N1 114 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 A0A087WV48 116 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 IGHV2-5P01817 119 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 FGF6P10767 208 aa4.58□□□□□ -1.68
USP38-203ENST00000511739 SLC25A29Q8N8R3 303 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms