RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SLC25A16P16260 332 aa8.52□□□□□ -1.05
SH3RF1-203ENST00000508685 IFI27P40305 119 aaPredicted RBP8.52□□□□□ -1.05
SH3RF1-203ENST00000508685 LY6EQ16553 131 aa8.52□□□□□ -1.05
SH3RF1-203ENST00000508685 KLK9Q2XQG4 91 aa8.52□□□□□ -1.05
SH3RF1-203ENST00000508685 SIGLEC8Q9NYZ4 499 aa8.52□□□□□ -1.05
SH3RF1-203ENST00000508685 KLK9Q9UKQ9 250 aa8.52□□□□□ -1.05
SH3RF1-203ENST00000508685 RBAKDNA6NC62 111 aa8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 HBDP02042 147 aa8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 C15orf32Q32M92 178 aa8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 FER1L6-AS1Q8NA97 138 aa8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 FAM110DQ8TAY7 271 aaPredicted RBP8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 MEGF9Q9H1U4 602 aa8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 LINC00527Q9UJ94 153 aa8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 MOB4Q9Y3A3 225 aa8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 IGHV3-35A0A0C4DH35 117 aa8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 H3BUX3 64 aa8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 MRPL51Q4U2R6 128 aaKnown RBP8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 PRR31Q5SQ13 230 aa8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 OR9G4Q8NGQ1 327 aa8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 CNFNQ9BYD5 112 aa8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 PEF1Q9UBV8 284 aaKnown RBP8.51□□□□□ -1.05
SH3RF1-203ENST00000508685 IGHV3OR16-8A0A075B7F1 116 aa8.5□□□□□ -1.05
SH3RF1-203ENST00000508685 A0A087X0K7 114 aa8.5□□□□□ -1.05
SH3RF1-203ENST00000508685 FABP5P3A8MUU1 101 aa8.5□□□□□ -1.05
SH3RF1-203ENST00000508685 RNF223E7ERA6 249 aa8.5□□□□□ -1.05
SH3RF1-203ENST00000508685 CTSGP08311 255 aa8.5□□□□□ -1.05
SH3RF1-203ENST00000508685 IGLC6P0CF74 106 aa8.5□□□□□ -1.05
SH3RF1-203ENST00000508685 CKS2P33552 79 aa8.5□□□□□ -1.05
SH3RF1-203ENST00000508685 ITPR3Q14573 2671 aa8.5□□□□□ -1.05
SH3RF1-203ENST00000508685 LINC01546A6NGU7 62 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 H0Y8G0 127 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 TWIST1Q15672 202 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 TMEM97Q5BJF2 176 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 AMN1Q8IY45 258 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 SLC50A1Q9BRV3 221 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 MYO9AB2RTY4 2548 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 MUC21A0A0G2JKD1 596 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 MUC21A0A140T8X8 626 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 TMEM213A2RRL7 107 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 A6NDN8 102 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 PRB4P10163 310 aaPredicted RBP8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 MUC21Q5SSG8 566 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 LINC01356Q8N9X3 169 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 OR8A1Q8NGG7 326 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 ASCL2Q99929 193 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 TIMM8BQ9Y5J9 83 aaPredicted RBP8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 TLN2Q9Y4G6 2542 aa8.49□□□□□ -1.05
SH3RF1-203ENST00000508685 A0A096LNJ9 63 aa8.48□□□□□ -1.05
SH3RF1-203ENST00000508685 LOC389332A0A1B0GUA5 103 aa8.48□□□□□ -1.05
SH3RF1-203ENST00000508685 TGFAP01135 160 aa8.48□□□□□ -1.05
SH3RF1-203ENST00000508685 CDKN1BP46527 198 aa8.48□□□□□ -1.05
SH3RF1-203ENST00000508685 Q71RC1 249 aaPredicted RBP8.48□□□□□ -1.05
SH3RF1-203ENST00000508685 BOD1L2Q8IYS8 172 aa8.48□□□□□ -1.05
SH3RF1-203ENST00000508685 OR4X2Q8NGF9 303 aa8.48□□□□□ -1.05
SH3RF1-203ENST00000508685 ZNF502Q8TBZ5 544 aa8.48□□□□□ -1.05
SH3RF1-203ENST00000508685 IFI27L1Q96BM0 104 aa8.48□□□□□ -1.05
SH3RF1-203ENST00000508685 MAP1LC3AQ9H492 121 aa8.48□□□□□ -1.05
SH3RF1-203ENST00000508685 IGKV2-40A0A087WW87 121 aaPredicted RBP8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 TMSB15BA0A087X1C1 80 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 IGKV2D-40P01614 121 aaPredicted RBP8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 GATA3P23771 443 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 DEFB113Q30KQ7 82 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 Q5PR19 223 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 C2orf91Q6ZV80 131 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 MRPL53Q96EL3 112 aaKnown RBP8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 CCDC140Q96MF4 163 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 NXT2Q9NPJ8 142 aaKnown RBP8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 SMAD5-AS1Q9Y6J3 95 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 CUBNO60494 3623 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 TRAV41A0A0B4J266 112 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 A6NDX4 124 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 CLEC3BP05452 202 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 BLCAPP62952 87 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 Q6ZS46 218 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 Q6ZVH6 145 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 ATP6V0BQ99437 205 aa8.47□□□□□ -1.05
SH3RF1-203ENST00000508685 NCR2O95944 276 aa8.46□□□□□ -1.05
SH3RF1-203ENST00000508685 ORM1P02763 201 aa8.46□□□□□ -1.05
SH3RF1-203ENST00000508685 HSD52Q0P140 79 aa8.46□□□□□ -1.05
SH3RF1-203ENST00000508685 C19orf54Q5BKX5 351 aa8.46□□□□□ -1.05
SH3RF1-203ENST00000508685 SMPXQ9UHP9 88 aa8.46□□□□□ -1.05
SH3RF1-203ENST00000508685 H3BRM9 83 aa8.46□□□□□ -1.06
SH3RF1-203ENST00000508685 SMAD7O15105 426 aaKnown RBP8.46□□□□□ -1.06
SH3RF1-203ENST00000508685 FGF6P10767 208 aa8.46□□□□□ -1.06
SH3RF1-203ENST00000508685 CR1P17927 2039 aa8.46□□□□□ -1.06
SH3RF1-203ENST00000508685 FCER1GP30273 86 aa8.46□□□□□ -1.06
SH3RF1-203ENST00000508685 RBX1P62877 108 aa8.46□□□□□ -1.06
SH3RF1-203ENST00000508685 CLEC19AQ6UXS0 136 aa8.46□□□□□ -1.06
SH3RF1-203ENST00000508685 RNASE8Q8TDE3 154 aaKnown RBP8.46□□□□□ -1.06
SH3RF1-203ENST00000508685 AP1S3Q96PC3 154 aa8.46□□□□□ -1.06
SH3RF1-203ENST00000508685 VGLL1Q99990 258 aa8.46□□□□□ -1.06
SH3RF1-203ENST00000508685 MCRIP2Q9BUT9 160 aaKnown RBP8.46□□□□□ -1.06
SH3RF1-203ENST00000508685 FLNAP21333 2647 aaKnown RBP8.46□□□□□ -1.06
SH3RF1-203ENST00000508685 OTOGQ6ZRI0 2925 aa8.46□□□□□ -1.06
SH3RF1-203ENST00000508685 C7orf71A4D174 169 aa8.45□□□□□ -1.06
SH3RF1-203ENST00000508685 BUB3O43684 328 aa8.45□□□□□ -1.06
SH3RF1-203ENST00000508685 NPYP01303 97 aa8.45□□□□□ -1.06
SH3RF1-203ENST00000508685 IGHG4P01861 327 aa8.45□□□□□ -1.06
SH3RF1-203ENST00000508685 IGHV4-31P0DP07 118 aa8.45□□□□□ -1.06
SH3RF1-203ENST00000508685 CACNG7P62955 275 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms