RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 C3orf85A0A1B0GTC6 90 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 SDHAF1A6NFY7 115 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 C2orf70A6NJV1 201 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 H3BRN7 92 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 SNAPC5O75971 98 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 S100A8P05109 93 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 HIST1H1DP16402 221 aaKnown RBP1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 BRS3P32247 399 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 GNG4P50150 75 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 PDE6HQ13956 83 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 Q1T7F1 81 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 DEFB113Q30KQ7 82 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 KRTAP13-1Q8IUC0 172 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 ARL17AQ8IVW1 177 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 CLECL1Q8IZS7 167 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 LINC00269Q8N2A0 174 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 Q8N2B8 174 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 NAA60Q9H7X0 242 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 CPAMD8Q8IZJ3 1885 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 MYO5AQ9Y4I1 1855 aaKnown RBP1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 CCDC88CQ9P219 2028 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 MYO9BQ13459 2157 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 MBD5Q9P267 1494 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 ANAPC1Q9H1A4 1944 aa1.11□□□□□ -2.23
HMGB1P35-201ENST00000503360 CNTLNQ9NXG0 1405 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 LOC100130705A0A1B0GUX0 176 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 A6NN06 94 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 C5orf67F2Z3F1 127 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 CD2P06729 351 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 CXCL8P10145 99 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 PPP3R1P63098 170 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 C1orf137Q5JT78 98 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 CASC2Q6XLA1 102 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 FOXI2Q6ZQN5 318 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 Q6ZUT4 128 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 OR10AG1Q8NH19 301 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 AGPAT4-IT1Q9H0P7 198 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 BOKQ9UMX3 212 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 NOP16Q9Y3C1 178 aaKnown RBP1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 IER3IP1Q9Y5U9 82 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 CHCHD2Q9Y6H1 151 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 QRICH2Q9H0J4 1663 aa1.1□□□□□ -2.23
HMGB1P35-201ENST00000503360 ADGRB1O14514 1584 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 TRAV2A0A0B4J234 112 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 J3QLW9 94 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 M0R129 80 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 EDF1O60869 148 aaKnown RBP1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 TNFP01375 233 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 TPPP2P59282 170 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 CNBPP62633 177 aaKnown RBP1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 MIR22HGQ0VDD5 57 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 TPRXLQ17RH7 258 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 Q56UQ5 140 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 MIC13Q5XKP0 118 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 OR2T2Q6IF00 324 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 ZNF833PQ6ZTB9 187 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 GKN2Q86XP6 184 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 C8orf59Q8N0T1 100 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 FAM19A2Q8N3H0 131 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 ACBD7Q8N6N7 88 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 C5orf17Q8NAS9 161 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 VSTM2AQ8TAG5 236 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 SEC11CQ9BY50 192 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 TTTY12Q9BZ98 90 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 TAS2R8Q9NYW2 309 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 ZFP30Q9Y2G7 519 aa1.09□□□□□ -2.23
HMGB1P35-201ENST00000503360 ARHGAP32A7KAX9 2087 aa1.09□□□□□ -2.24
HMGB1P35-201ENST00000503360 MPDZO75970 2070 aa1.09□□□□□ -2.24
HMGB1P35-201ENST00000503360 DIDO1Q9BTC0 2240 aaKnown RBP1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 VPS8Q8N3P4 1428 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 CUL7Q14999 1698 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 PXDNLA1KZ92 1463 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 TMEM218A2RU14 115 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 CCDC179H3BU77 68 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 J3QRE1 110 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 PITX3O75364 302 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 IGHV3-33P01772 117 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 KRTAP26-1Q6PEX3 210 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 TEX261Q6UWH6 196 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 GTF2H5Q6ZYL4 71 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 SLC25A26Q70HW3 274 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 SNX29P2Q8IUI4 249 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 PLPP5Q8NEB5 264 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 Q8TAT8 98 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 ZCCHC13Q8WW36 166 aaKnown RBP1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 TXNDC17Q9BRA2 123 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 RPRMQ9NS64 109 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 SERP1Q9Y6X1 66 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 PTPRBP23467 1997 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 TANC2Q9HCD6 1990 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 GLI3P10071 1580 aa1.08□□□□□ -2.24
HMGB1P35-201ENST00000503360 COL4A5P29400 1685 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 USP54Q70EL1 1684 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 MYH7P12883 1935 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 RP1P56715 2156 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 POLEQ07864 2286 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 DISP1Q96F81 1524 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 TRAV30A0A087WSZ9 112 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 PIGBOS1A0A0B4J2F0 54 aa1.07□□□□□ -2.24
HMGB1P35-201ENST00000503360 SPAARA0A1B0GVQ0 90 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms