RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 Q8TAT8 98 aa10.23□□□□□ -0.77
HDAC6-236ENST00000498808 SPXQ9BT56 116 aa10.23□□□□□ -0.77
HDAC6-236ENST00000498808 TNXBP22105 4242 aa10.22□□□□□ -0.77
HDAC6-236ENST00000498808 IGHV3-16A0A0C4DH30 117 aa10.22□□□□□ -0.77
HDAC6-236ENST00000498808 PYYP10082 97 aa10.22□□□□□ -0.77
HDAC6-236ENST00000498808 HIST1H1EP10412 219 aaKnown RBP10.22□□□□□ -0.77
HDAC6-236ENST00000498808 GATA1P15976 413 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-236ENST00000498808 TAS2R30P59541 319 aa10.22□□□□□ -0.77
HDAC6-236ENST00000498808 PDE6HQ13956 83 aa10.22□□□□□ -0.77
HDAC6-236ENST00000498808 NRARPQ7Z6K4 114 aa10.22□□□□□ -0.77
HDAC6-236ENST00000498808 OR4C5Q8NGB2 326 aa10.22□□□□□ -0.77
HDAC6-236ENST00000498808 OR1L4Q8NGR5 311 aa10.22□□□□□ -0.77
HDAC6-236ENST00000498808 TRIM63Q969Q1 353 aa10.22□□□□□ -0.77
HDAC6-236ENST00000498808 DAZAP1Q96EP5 407 aaKnown RBP10.22□□□□□ -0.77
HDAC6-236ENST00000498808 SLC25A21Q9BQT8 299 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-236ENST00000498808 TMEM14CQ9P0S9 112 aa10.22□□□□□ -0.77
HDAC6-236ENST00000498808 TIMM9Q9Y5J7 89 aa10.22□□□□□ -0.77
HDAC6-236ENST00000498808 SCGB1D2O95969 90 aa10.21□□□□□ -0.77
HDAC6-236ENST00000498808 TMEM183BQ1AE95 376 aa10.21□□□□□ -0.77
HDAC6-236ENST00000498808 LELP1Q5T871 98 aa10.21□□□□□ -0.77
HDAC6-236ENST00000498808 FAM122CQ6P4D5 195 aa10.21□□□□□ -0.77
HDAC6-236ENST00000498808 TMEM183AQ8IXX5 376 aa10.21□□□□□ -0.77
HDAC6-236ENST00000498808 BAALCQ8WXS3 180 aa10.21□□□□□ -0.77
HDAC6-236ENST00000498808 PFDN5Q99471 154 aa10.21□□□□□ -0.77
HDAC6-236ENST00000498808 BOLA1Q9Y3E2 137 aa10.21□□□□□ -0.77
HDAC6-236ENST00000498808 C9orf170A2RU37 121 aa10.2□□□□□ -0.78
HDAC6-236ENST00000498808 RBFOX3A6NFN3 312 aa10.2□□□□□ -0.78
HDAC6-236ENST00000498808 ZNF138P52744 262 aa10.2□□□□□ -0.78
HDAC6-236ENST00000498808 RPL37AP61513 92 aaKnown RBP10.2□□□□□ -0.78
HDAC6-236ENST00000498808 AAMDCQ9H7C9 122 aa10.2□□□□□ -0.78
HDAC6-236ENST00000498808 TRGV11A0A075B6L2 103 aa10.19□□□□□ -0.78
HDAC6-236ENST00000498808 TRBV7-9A0A0J9YWB2 115 aa10.19□□□□□ -0.78
HDAC6-236ENST00000498808 C7orf66A4D0T2 115 aa10.19□□□□□ -0.78
HDAC6-236ENST00000498808 PFN1P07737 140 aaKnown RBP10.19□□□□□ -0.78
HDAC6-236ENST00000498808 UBE2MP61081 183 aaKnown RBP10.19□□□□□ -0.78
HDAC6-236ENST00000498808 ZNF266Q14584 549 aa10.19□□□□□ -0.78
HDAC6-236ENST00000498808 ACOT6Q3I5F7 207 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-236ENST00000498808 C12orf45Q8N5I9 185 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-236ENST00000498808 TRAV8-3A0A0A6YYJ7 113 aa10.18□□□□□ -0.78
HDAC6-236ENST00000498808 FABP12A6NFH5 140 aa10.18□□□□□ -0.78
HDAC6-236ENST00000498808 SMIM18P0DKX4 95 aa10.18□□□□□ -0.78
HDAC6-236ENST00000498808 RAB31Q13636 194 aa10.18□□□□□ -0.78
HDAC6-236ENST00000498808 BAK1Q16611 211 aa10.18□□□□□ -0.78
HDAC6-236ENST00000498808 TOMM5Q8N4H5 51 aa10.18□□□□□ -0.78
HDAC6-236ENST00000498808 SLC25A29Q8N8R3 303 aa10.18□□□□□ -0.78
HDAC6-236ENST00000498808 SLC39A9Q9NUM3 307 aa10.18□□□□□ -0.78
HDAC6-236ENST00000498808 WDR83OSQ9Y284 106 aa10.18□□□□□ -0.78
HDAC6-236ENST00000498808 M0R2P5 195 aa10.17□□□□□ -0.78
HDAC6-236ENST00000498808 IGLV2-11P01706 119 aa10.17□□□□□ -0.78
HDAC6-236ENST00000498808 RPL29P47914 159 aaKnown RBP10.17□□□□□ -0.78
HDAC6-236ENST00000498808 AP3S2P59780 193 aa10.17□□□□□ -0.78
HDAC6-236ENST00000498808 IAH1Q2TAA2 248 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-236ENST00000498808 Q6AWC8 147 aa10.17□□□□□ -0.78
HDAC6-236ENST00000498808 FAM159AQ6UWV7 190 aa10.17□□□□□ -0.78
HDAC6-236ENST00000498808 DYNC2LI1Q8TCX1 351 aa10.17□□□□□ -0.78
HDAC6-236ENST00000498808 RNF222A6NCQ9 220 aa10.16□□□□□ -0.78
HDAC6-236ENST00000498808 DAZ4Q86SG3 579 aaKnown RBP10.16□□□□□ -0.78
HDAC6-236ENST00000498808 GTSF1LQ9H1H1 148 aa10.16□□□□□ -0.78
HDAC6-236ENST00000498808 DAZ3Q9NR90 486 aaKnown RBP10.16□□□□□ -0.78
HDAC6-236ENST00000498808 GNRH2O43555 120 aa10.15□□□□□ -0.78
HDAC6-236ENST00000498808 MBPP02686 304 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-236ENST00000498808 GCSAMLQ5JQS6 135 aa10.15□□□□□ -0.78
HDAC6-236ENST00000498808 Q8N976 141 aa10.15□□□□□ -0.78
HDAC6-236ENST00000498808 SLC25A2Q9BXI2 301 aa10.15□□□□□ -0.78
HDAC6-236ENST00000498808 GPN1Q9HCN4 374 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-236ENST00000498808 GSKIPQ9P0R6 139 aa10.15□□□□□ -0.78
HDAC6-236ENST00000498808 FBLL1A6NHQ2 334 aaKnown RBP10.14□□□□□ -0.79
HDAC6-236ENST00000498808 CST7O76096 145 aa10.14□□□□□ -0.79
HDAC6-236ENST00000498808 RHOHQ15669 191 aa10.14□□□□□ -0.79
HDAC6-236ENST00000498808 VWC2Q2TAL6 325 aa10.14□□□□□ -0.79
HDAC6-236ENST00000498808 ATP6V0E2Q8NHE4 81 aa10.14□□□□□ -0.79
HDAC6-236ENST00000498808 FAM167A-AS1Q96KT0 104 aa10.14□□□□□ -0.79
HDAC6-236ENST00000498808 PRADC1Q9BSG0 188 aa10.14□□□□□ -0.79
HDAC6-236ENST00000498808 UQCC1Q9NVA1 299 aa10.14□□□□□ -0.79
HDAC6-236ENST00000498808 NAGKQ9UJ70 344 aa10.14□□□□□ -0.79
HDAC6-236ENST00000498808 UBE2L5PA0A1B0GUS4 154 aa10.13□□□□□ -0.79
HDAC6-236ENST00000498808 TRBV6-4A0A1B0GX49 114 aa10.13□□□□□ -0.79
HDAC6-236ENST00000498808 NBEAP1P0C6P0 100 aa10.13□□□□□ -0.79
HDAC6-236ENST00000498808 DNAJC30Q96LL9 226 aa10.13□□□□□ -0.79
HDAC6-236ENST00000498808 SLIRPQ9GZT3 109 aaKnown RBP10.13□□□□□ -0.79
HDAC6-236ENST00000498808 FLVCR2Q9UPI3 526 aa10.13□□□□□ -0.79
HDAC6-236ENST00000498808 RBAKDNA6NC62 111 aa10.12□□□□□ -0.79
HDAC6-236ENST00000498808 ASIPP42127 132 aa10.12□□□□□ -0.79
HDAC6-236ENST00000498808 CAV2P51636 162 aa10.12□□□□□ -0.79
HDAC6-236ENST00000498808 BAXQ07812 192 aa10.12□□□□□ -0.79
HDAC6-236ENST00000498808 PYDC2Q56P42 97 aa10.12□□□□□ -0.79
HDAC6-236ENST00000498808 TOR2AQ5JU69 321 aa10.12□□□□□ -0.79
HDAC6-236ENST00000498808 DPPA3Q6W0C5 159 aa10.12□□□□□ -0.79
HDAC6-236ENST00000498808 CHAC2Q8WUX2 184 aa10.12□□□□□ -0.79
HDAC6-236ENST00000498808 DEDD2Q8WXF8 326 aa10.12□□□□□ -0.79
HDAC6-236ENST00000498808 PHYHIPLQ96FC7 376 aa10.12□□□□□ -0.79
HDAC6-236ENST00000498808 C20orf85Q9H1P6 137 aa10.12□□□□□ -0.79
HDAC6-236ENST00000498808 COX11Q9Y6N1 276 aa10.12□□□□□ -0.79
HDAC6-236ENST00000498808 IGHV3-73A0A0B4J1V6 119 aa10.11□□□□□ -0.79
HDAC6-236ENST00000498808 FAM24AA6NFZ4 105 aa10.11□□□□□ -0.79
HDAC6-236ENST00000498808 L7N2F9 121 aa10.11□□□□□ -0.79
HDAC6-236ENST00000498808 TYMSP04818 313 aa10.11□□□□□ -0.79
HDAC6-236ENST00000498808 VAMP2P63027 116 aa10.11□□□□□ -0.79
HDAC6-236ENST00000498808 CFAP126Q5VTH2 177 aa10.11□□□□□ -0.79
HDAC6-236ENST00000498808 MIR17HGQ75NE6 70 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms