RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 SLC17A3O00476 420 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 IGHV3-30P01768 117 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 IGHV3-33P01772 117 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 OR4E1P0C645 316 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 SFTA3P0C7M3 94 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 IGHV3-30-3P0DP02 117 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 IGHV3-30-5P0DP03 117 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 SRPXP78539 464 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 CD300CQ08708 224 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 BTN1A1Q13410 526 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 LYZL2Q7Z4W2 148 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 BPIFA4PQ86YQ2 179 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 TMEM229BQ8NBD8 167 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 OR51S1Q8NGJ8 323 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 OR52I2Q8NH67 350 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 ATP6V0E2Q8NHE4 81 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 ARV1Q9H2C2 271 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 COMMD3Q9UBI1 195 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 GPR132Q9UNW8 380 aa4.9□□□□□ -1.63
VPS45-210ENST00000497638 SMCO3A2RU48 225 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 PITX3O75364 302 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 CCNKO75909 580 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 PFN1P07737 140 aaKnown RBP4.89□□□□□ -1.63
VPS45-210ENST00000497638 NMBP08949 121 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 IGLC2P0DOY2 106 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 CRISP2P16562 243 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 RNASE4P34096 147 aaKnown RBP4.89□□□□□ -1.63
VPS45-210ENST00000497638 TGFBR1P36897 503 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 LELP1Q5T871 98 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 OR10P1Q8NGE3 313 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 BAALCQ8WXS3 180 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 RASL10AQ92737 203 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 RMI2Q96E14 147 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 MRPL53Q96EL3 112 aaKnown RBP4.89□□□□□ -1.63
VPS45-210ENST00000497638 FAM19A4Q96LR4 140 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 ARL6Q9H0F7 186 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 VCX3BQ9H321 246 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 TP53TG3Q9ULZ0 132 aa4.89□□□□□ -1.63
VPS45-210ENST00000497638 TRAV4A0A0B4J268 109 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 LOC100131303A0A0U1RQF7 123 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 DUXBA0A1W2PPF3 345 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 RNF222A6NCQ9 220 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 FABP12A6NFH5 140 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 DISC1C4P0D8 188 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 H3BTX0 84 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 K7EPK0 472 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 GPX1P07203 203 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 SNRPCP09234 159 aaKnown RBP4.88□□□□□ -1.63
VPS45-210ENST00000497638 SLC25A6P12236 298 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 ANXA3P12429 323 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 SSBP1Q04837 148 aaKnown RBP4.88□□□□□ -1.63
VPS45-210ENST00000497638 OPCMLQ14982 345 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 GUK1Q16774 197 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 IZUMO2Q6UXV1 221 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 PATE2Q6UY27 113 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 LINC00305Q7Z4B0 112 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 HSD17B11Q8NBQ5 300 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 SVIPQ8NHG7 77 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 C15orf40Q8WUR7 153 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 SAT2Q96F10 170 aaPredicted RBP4.88□□□□□ -1.63
VPS45-210ENST00000497638 LINC00477Q96M19 166 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 SPXQ9BT56 116 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 RPH3ALQ9UNE2 315 aa4.88□□□□□ -1.63
VPS45-210ENST00000497638 STRAPQ9Y3F4 350 aaKnown RBP4.88□□□□□ -1.63
VPS45-210ENST00000497638 WRBO00258 174 aa4.87□□□□□ -1.63
VPS45-210ENST00000497638 SYNGR2O43760 224 aa4.87□□□□□ -1.63
VPS45-210ENST00000497638 HPGDSO60760 199 aa4.87□□□□□ -1.63
VPS45-210ENST00000497638 ZNF253O75346 499 aa4.87□□□□□ -1.63
VPS45-210ENST00000497638 POLR2GP62487 172 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS45-210ENST00000497638 SPANXN5Q5MJ07 72 aa4.87□□□□□ -1.63
VPS45-210ENST00000497638 FAAP20Q6NZ36 180 aa4.87□□□□□ -1.63
VPS45-210ENST00000497638 SCGB3A2Q96PL1 93 aa4.87□□□□□ -1.63
VPS45-210ENST00000497638 PRRT1Q99946 306 aa4.87□□□□□ -1.63
VPS45-210ENST00000497638 SRRQ9GZT4 340 aa4.87□□□□□ -1.63
VPS45-210ENST00000497638 DPH3P1Q9H4G8 78 aa4.87□□□□□ -1.63
VPS45-210ENST00000497638 RAB26Q9ULW5 256 aa4.87□□□□□ -1.63
VPS45-210ENST00000497638 TRAV8-1A0A0A6YYK1 113 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 A0A0D9SG52 128 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 FAM25AB3EWG3 89 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 FAM25CB3EWG5 89 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 FAM25GB3EWG6 89 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 GGTLC3B5MD39 225 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 FNDC10F2Z333 226 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 H3BQ15 152 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 COX7A2P2O60397 106 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 GATA1P15976 413 aaPredicted RBP4.86□□□□□ -1.63
VPS45-210ENST00000497638 ERCC8Q13216 396 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 NEDD8Q15843 81 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 C14orf177Q52M58 125 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 FFAR4Q5NUL3 377 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 FAM122CQ6P4D5 195 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 ZNF546Q86UE3 836 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 ZFAND2AQ8N6M9 145 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 OR4C5Q8NGB2 326 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 YIPF6Q96EC8 236 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 AGPAT4-IT1Q9H0P7 198 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 SH3BGRL3Q9H299 93 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 PRELID1Q9Y255 219 aa4.86□□□□□ -1.63
VPS45-210ENST00000497638 H3BP45 60 aa4.85□□□□□ -1.63
VPS45-210ENST00000497638 M0R3E3 92 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms