RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 NKX6-2Q9C056 277 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-212ENST00000495497 PSG8Q9UQ74 426 aa13.92□□□□□ -0.18
HDAC4-212ENST00000495497 PLECQ15149 4684 aaKnown RBP13.91□□□□□ -0.18
HDAC4-212ENST00000495497 TRAV1-1A0A0B4J248 108 aa13.91□□□□□ -0.18
HDAC4-212ENST00000495497 TMEM189A5PLL7 270 aa13.91□□□□□ -0.18
HDAC4-212ENST00000495497 F6UZH7 168 aa13.91□□□□□ -0.18
HDAC4-212ENST00000495497 K7EQM0 130 aa13.91□□□□□ -0.18
HDAC4-212ENST00000495497 PRNTQ86SH4 94 aa13.91□□□□□ -0.18
HDAC4-212ENST00000495497 C8orf49Q96NF6 230 aa13.91□□□□□ -0.18
HDAC4-212ENST00000495497 TREM1Q9NP99 234 aa13.91□□□□□ -0.18
HDAC4-212ENST00000495497 LENEPQ9Y5L5 61 aa13.91□□□□□ -0.18
HDAC4-212ENST00000495497 PLAC8L1A1L4L8 177 aa13.9□□□□□ -0.18
HDAC4-212ENST00000495497 FLI1Q01543 452 aaPredicted RBP13.9□□□□□ -0.18
HDAC4-212ENST00000495497 FAM222AQ5U5X8 452 aa13.9□□□□□ -0.18
HDAC4-212ENST00000495497 TMEM75Q8N9X5 138 aa13.9□□□□□ -0.18
HDAC4-212ENST00000495497 GNG13Q9P2W3 67 aa13.9□□□□□ -0.18
HDAC4-212ENST00000495497 ARL2-SNX15V9GYD0 113 aa13.9□□□□□ -0.18
HDAC4-212ENST00000495497 SPART-AS1P0CW21 52 aa13.89□□□□□ -0.19
HDAC4-212ENST00000495497 C12orf74Q32Q52 190 aa13.89□□□□□ -0.19
HDAC4-212ENST00000495497 HIST1H2BAQ96A08 127 aa13.89□□□□□ -0.19
HDAC4-212ENST00000495497 PYGO2Q9BRQ0 406 aa13.89□□□□□ -0.19
HDAC4-212ENST00000495497 DKK2Q9UBU2 259 aa13.89□□□□□ -0.19
HDAC4-212ENST00000495497 PPT1P50897 306 aa13.88□□□□□ -0.19
HDAC4-212ENST00000495497 Q6ZTC4 211 aa13.88□□□□□ -0.19
HDAC4-212ENST00000495497 RNASE8Q8TDE3 154 aaKnown RBP13.88□□□□□ -0.19
HDAC4-212ENST00000495497 PHLDA1Q8WV24 401 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-212ENST00000495497 C16orf74Q96GX8 76 aa13.88□□□□□ -0.19
HDAC4-212ENST00000495497 TP53TG3Q9ULZ0 132 aa13.88□□□□□ -0.19
HDAC4-212ENST00000495497 C11orf94C9JXX5 98 aa13.87□□□□□ -0.19
HDAC4-212ENST00000495497 TEX46H3BTG2 121 aa13.87□□□□□ -0.19
HDAC4-212ENST00000495497 RGS13O14921 159 aa13.87□□□□□ -0.19
HDAC4-212ENST00000495497 MUC21Q5SSG8 566 aa13.87□□□□□ -0.19
HDAC4-212ENST00000495497 Q6AWC8 147 aa13.87□□□□□ -0.19
HDAC4-212ENST00000495497 TMEM263Q8WUH6 116 aaKnown RBP13.87□□□□□ -0.19
HDAC4-212ENST00000495497 NDFIP1Q9BT67 221 aa13.87□□□□□ -0.19
HDAC4-212ENST00000495497 IGHV1OR15-1A0A075B7D0 117 aa13.86□□□□□ -0.19
HDAC4-212ENST00000495497 SCO2A0A1W2PP80 73 aa13.86□□□□□ -0.19
HDAC4-212ENST00000495497 CBY3A6NI87 242 aa13.86□□□□□ -0.19
HDAC4-212ENST00000495497 ZNF80P51504 273 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-212ENST00000495497 ZNF493Q6ZR52 646 aa13.86□□□□□ -0.19
HDAC4-212ENST00000495497 EIF4E3Q8N5X7 224 aaKnown RBP13.86□□□□□ -0.19
HDAC4-212ENST00000495497 LINC00467Q9BRT7 94 aa13.86□□□□□ -0.19
HDAC4-212ENST00000495497 MANBALQ9NQG1 85 aa13.86□□□□□ -0.19
HDAC4-212ENST00000495497 Q86TA4 180 aa13.85□□□□□ -0.19
HDAC4-212ENST00000495497 NOP10Q9NPE3 64 aaKnown RBP13.85□□□□□ -0.19
HDAC4-212ENST00000495497 FBLL1A6NHQ2 334 aaKnown RBP13.84□□□□□ -0.19
HDAC4-212ENST00000495497 GCGP01275 180 aa13.84□□□□□ -0.19
HDAC4-212ENST00000495497 AKR1C3P42330 323 aa13.84□□□□□ -0.19
HDAC4-212ENST00000495497 UBE2G1P62253 170 aa13.84□□□□□ -0.19
HDAC4-212ENST00000495497 BLOC1S1P78537 153 aa13.84□□□□□ -0.19
HDAC4-212ENST00000495497 CEMP1Q6PRD7 247 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-212ENST00000495497 TCEAL7Q9BRU2 100 aa13.84□□□□□ -0.19
HDAC4-212ENST00000495497 GSN-AS1Q9NRJ2 163 aa13.84□□□□□ -0.19
HDAC4-212ENST00000495497 NAGKQ9UJ70 344 aa13.84□□□□□ -0.19
HDAC4-212ENST00000495497 TRAV21A0A0B4J279 112 aa13.83□□□□□ -0.2
HDAC4-212ENST00000495497 ANXA2RQ3ZCQ2 193 aa13.83□□□□□ -0.2
HDAC4-212ENST00000495497 SAPCD1Q5SSQ6 148 aa13.83□□□□□ -0.2
HDAC4-212ENST00000495497 C11orf72Q8NBR9 251 aa13.83□□□□□ -0.2
HDAC4-212ENST00000495497 FMC1Q96HJ9 113 aa13.83□□□□□ -0.2
HDAC4-212ENST00000495497 KLF12Q9Y4X4 402 aa13.83□□□□□ -0.2
HDAC4-212ENST00000495497 TIMM8BQ9Y5J9 83 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-212ENST00000495497 LYRM9A8MSI8 78 aa13.82□□□□□ -0.2
HDAC4-212ENST00000495497 DEFB130BP0DP73 79 aa13.82□□□□□ -0.2
HDAC4-212ENST00000495497 DEFB130AP0DP74 79 aa13.82□□□□□ -0.2
HDAC4-212ENST00000495497 DAD1P61803 113 aa13.82□□□□□ -0.2
HDAC4-212ENST00000495497 SMUG1Q53HV7 270 aa13.82□□□□□ -0.2
HDAC4-212ENST00000495497 C2CD4CQ8TF44 421 aa13.82□□□□□ -0.2
HDAC4-212ENST00000495497 TEX48A0A1B0GUV7 120 aa13.81□□□□□ -0.2
HDAC4-212ENST00000495497 NUPR2A6NF83 97 aa13.81□□□□□ -0.2
HDAC4-212ENST00000495497 SNURFLB1AK76 121 aa13.81□□□□□ -0.2
HDAC4-212ENST00000495497 IFNA1P01562 189 aa13.81□□□□□ -0.2
HDAC4-212ENST00000495497 TMEM183BQ1AE95 376 aa13.81□□□□□ -0.2
HDAC4-212ENST00000495497 FAM159AQ6UWV7 190 aa13.81□□□□□ -0.2
HDAC4-212ENST00000495497 PCNPQ8WW12 178 aaKnown RBP13.81□□□□□ -0.2
HDAC4-212ENST00000495497 C11orf21Q9P2W6 132 aa13.81□□□□□ -0.2
HDAC4-212ENST00000495497 LYSTQ99698 3801 aa13.8□□□□□ -0.2
HDAC4-212ENST00000495497 TRAV10A0A0B4J240 114 aa13.8□□□□□ -0.2
HDAC4-212ENST00000495497 GNRH2O43555 120 aa13.8□□□□□ -0.2
HDAC4-212ENST00000495497 BCL2P10415 239 aa13.8□□□□□ -0.2
HDAC4-212ENST00000495497 TMEM183AQ8IXX5 376 aa13.8□□□□□ -0.2
HDAC4-212ENST00000495497 NHLRC2Q8NBF2 726 aa13.8□□□□□ -0.2
HDAC4-212ENST00000495497 ZNF680Q8NEM1 530 aa13.8□□□□□ -0.2
HDAC4-212ENST00000495497 MDFICQ9P1T7 246 aa13.8□□□□□ -0.2
HDAC4-212ENST00000495497 KMT2CQ8NEZ4 4911 aaKnown RBP13.8□□□□□ -0.2
HDAC4-212ENST00000495497 DEFB131BA0A096LNP1 70 aa13.79□□□□□ -0.2
HDAC4-212ENST00000495497 TRBV6-1A0A0K0K1D8 114 aa13.79□□□□□ -0.2
HDAC4-212ENST00000495497 LTAP01374 205 aa13.79□□□□□ -0.2
HDAC4-212ENST00000495497 HTN3P15516 51 aa13.79□□□□□ -0.2
HDAC4-212ENST00000495497 TEX261Q6UWH6 196 aa13.79□□□□□ -0.2
HDAC4-212ENST00000495497 LYPD6BQ8NI32 183 aa13.79□□□□□ -0.2
HDAC4-212ENST00000495497 ZC2HC1AQ96GY0 325 aa13.79□□□□□ -0.2
HDAC4-212ENST00000495497 DERL1Q9BUN8 251 aa13.79□□□□□ -0.2
HDAC4-212ENST00000495497 ZFP30Q9Y2G7 519 aa13.79□□□□□ -0.2
HDAC4-212ENST00000495497 PFN1P07737 140 aaKnown RBP13.78□□□□□ -0.2
HDAC4-212ENST00000495497 CRIP1P50238 77 aa13.78□□□□□ -0.2
HDAC4-212ENST00000495497 MEF2BQ02080 365 aaPredicted RBP13.78□□□□□ -0.2
HDAC4-212ENST00000495497 GAGE12BA1L429 117 aa13.77□□□□□ -0.21
HDAC4-212ENST00000495497 GAGE7O76087 117 aa13.77□□□□□ -0.21
HDAC4-212ENST00000495497 TYMSP04818 313 aa13.77□□□□□ -0.21
HDAC4-212ENST00000495497 GAGE12FP0CL80 117 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms