RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ZNF80P51504 273 aaPredicted RBP14.2□□□□□ -0.14
USP39-218ENST00000493829 OR5I1Q13606 314 aa14.2□□□□□ -0.14
USP39-218ENST00000493829 FAM74A3Q4VXF1 159 aa14.2□□□□□ -0.14
USP39-218ENST00000493829 SMUG1Q53HV7 270 aa14.2□□□□□ -0.14
USP39-218ENST00000493829 OCC1Q8TAD7 63 aa14.2□□□□□ -0.14
USP39-218ENST00000493829 CLUHP3Q96NS8 147 aa14.2□□□□□ -0.14
USP39-218ENST00000493829 NIPSNAP3BQ9BS92 247 aa14.2□□□□□ -0.14
USP39-218ENST00000493829 LENEPQ9Y5L5 61 aa14.2□□□□□ -0.14
USP39-218ENST00000493829 TRAV12-3A0A0B4J271 114 aa14.19□□□□□ -0.14
USP39-218ENST00000493829 K7EN84 100 aa14.19□□□□□ -0.14
USP39-218ENST00000493829 FRMD6-AS1P0C7T7 363 aa14.19□□□□□ -0.14
USP39-218ENST00000493829 ADIRFQ15847 76 aa14.19□□□□□ -0.14
USP39-218ENST00000493829 TMEM241Q24JQ0 296 aa14.19□□□□□ -0.14
USP39-218ENST00000493829 NAT8Q9UHE5 227 aa14.19□□□□□ -0.14
USP39-218ENST00000493829 KLLNB2CW77 178 aa14.18□□□□□ -0.14
USP39-218ENST00000493829 DEFB121Q5J5C9 76 aa14.18□□□□□ -0.14
USP39-218ENST00000493829 MLST8Q9BVC4 326 aa14.18□□□□□ -0.14
USP39-218ENST00000493829 CSTL1Q9H114 145 aa14.18□□□□□ -0.14
USP39-218ENST00000493829 C7orf71A4D174 169 aa14.17□□□□□ -0.14
USP39-218ENST00000493829 CRXO43186 299 aaPredicted RBP14.17□□□□□ -0.14
USP39-218ENST00000493829 GIG44P09565 113 aaPredicted RBP14.17□□□□□ -0.14
USP39-218ENST00000493829 MORN3Q6PF18 240 aaPredicted RBP14.17□□□□□ -0.14
USP39-218ENST00000493829 LINC01551Q86U37 167 aa14.17□□□□□ -0.14
USP39-218ENST00000493829 TRBV7-9A0A0J9YWB2 115 aa14.17□□□□□ -0.14
USP39-218ENST00000493829 INSP01308 110 aa14.17□□□□□ -0.14
USP39-218ENST00000493829 RBMY1A1P0DJD3 496 aaKnown RBP14.17□□□□□ -0.14
USP39-218ENST00000493829 RBMY1CP0DJD4 496 aa14.17□□□□□ -0.14
USP39-218ENST00000493829 APOC4P55056 127 aa14.17□□□□□ -0.14
USP39-218ENST00000493829 RPL23P62829 140 aaKnown RBP14.17□□□□□ -0.14
USP39-218ENST00000493829 RBMY1FQ15415 496 aaKnown RBP14.17□□□□□ -0.14
USP39-218ENST00000493829 SEC11CQ9BY50 192 aa14.17□□□□□ -0.14
USP39-218ENST00000493829 NAGKQ9UJ70 344 aa14.17□□□□□ -0.14
USP39-218ENST00000493829 IGHV3OR16-12A0A075B7B8 117 aa14.16□□□□□ -0.14
USP39-218ENST00000493829 SH2D1AO60880 128 aa14.16□□□□□ -0.14
USP39-218ENST00000493829 CRIP1P50238 77 aa14.16□□□□□ -0.14
USP39-218ENST00000493829 LINC00322Q6ZN03 302 aaPredicted RBP14.16□□□□□ -0.14
USP39-218ENST00000493829 SDF2L1Q9HCN8 221 aa14.15□□□□□ -0.14
USP39-218ENST00000493829 AMBPP02760 352 aa14.14□□□□□ -0.15
USP39-218ENST00000493829 MUC21Q5SSG8 566 aa14.14□□□□□ -0.15
USP39-218ENST00000493829 FAM162BQ5T6X4 162 aa14.14□□□□□ -0.15
USP39-218ENST00000493829 SMIM12Q96EX1 92 aa14.14□□□□□ -0.15
USP39-218ENST00000493829 RNASE7Q9H1E1 156 aaKnown RBP14.14□□□□□ -0.15
USP39-218ENST00000493829 A8MZ25 164 aa14.14□□□□□ -0.15
USP39-218ENST00000493829 PFN1P07737 140 aaKnown RBP14.14□□□□□ -0.15
USP39-218ENST00000493829 DEFB135Q30KP9 77 aa14.14□□□□□ -0.15
USP39-218ENST00000493829 MRAPQ8TCY5 172 aa14.14□□□□□ -0.15
USP39-218ENST00000493829 LY96Q9Y6Y9 160 aa14.14□□□□□ -0.15
USP39-218ENST00000493829 KIR2DL5BA0A0G2JN68 375 aa14.13□□□□□ -0.15
USP39-218ENST00000493829 KIR2DL5BA0A0G2JPC4 375 aa14.13□□□□□ -0.15
USP39-218ENST00000493829 M0R036 132 aa14.13□□□□□ -0.15
USP39-218ENST00000493829 APOC3P02656 99 aa14.13□□□□□ -0.15
USP39-218ENST00000493829 COX8CQ7Z4L0 72 aa14.13□□□□□ -0.15
USP39-218ENST00000493829 KIR2DL5AQ8N109 375 aa14.13□□□□□ -0.15
USP39-218ENST00000493829 KIR2DL5BQ8NHK3 375 aa14.13□□□□□ -0.15
USP39-218ENST00000493829 TMEM208Q9BTX3 173 aa14.13□□□□□ -0.15
USP39-218ENST00000493829 C1QTNF4Q9BXJ3 329 aa14.13□□□□□ -0.15
USP39-218ENST00000493829 TRAV21A0A0B4J279 112 aa14.12□□□□□ -0.15
USP39-218ENST00000493829 KRBOX1C9JBD0 128 aa14.12□□□□□ -0.15
USP39-218ENST00000493829 HTN1P15515 57 aa14.12□□□□□ -0.15
USP39-218ENST00000493829 Q6AWC8 147 aa14.12□□□□□ -0.15
USP39-218ENST00000493829 ISOC2Q96AB3 205 aa14.12□□□□□ -0.15
USP39-218ENST00000493829 CARHSP1Q9Y2V2 147 aaKnown RBP14.12□□□□□ -0.15
USP39-218ENST00000493829 TMSB15BA0A087X1C1 80 aa14.11□□□□□ -0.15
USP39-218ENST00000493829 C10orf91Q5T1B1 145 aa14.11□□□□□ -0.15
USP39-218ENST00000493829 DAZAP1Q96EP5 407 aaKnown RBP14.11□□□□□ -0.15
USP39-218ENST00000493829 C11orf21Q9P2W6 132 aa14.11□□□□□ -0.15
USP39-218ENST00000493829 FABP5P3A8MUU1 101 aa14.1□□□□□ -0.15
USP39-218ENST00000493829 ZNF324O75467 553 aaPredicted RBP14.1□□□□□ -0.15
USP39-218ENST00000493829 PRM2P04554 102 aa14.1□□□□□ -0.15
USP39-218ENST00000493829 ERVFC1-1P60608 527 aa14.1□□□□□ -0.15
USP39-218ENST00000493829 RPL19P84098 196 aaKnown RBP14.1□□□□□ -0.15
USP39-218ENST00000493829 DEFA6Q01524 100 aa14.1□□□□□ -0.15
USP39-218ENST00000493829 C1orf158Q8N1D5 194 aa14.1□□□□□ -0.15
USP39-218ENST00000493829 RETNQ9HD89 108 aa14.1□□□□□ -0.15
USP39-218ENST00000493829 ATP6V1G1O75348 118 aa14.1□□□□□ -0.15
USP39-218ENST00000493829 ORM1P02763 201 aa14.1□□□□□ -0.15
USP39-218ENST00000493829 IBA57Q5T440 356 aaKnown RBP14.1□□□□□ -0.15
USP39-218ENST00000493829 CSNK1G2-AS1Q8NCQ2 148 aa14.1□□□□□ -0.15
USP39-218ENST00000493829 LINC01587Q99440 93 aa14.1□□□□□ -0.15
USP39-218ENST00000493829 BIN3Q9NQY0 253 aa14.1□□□□□ -0.15
USP39-218ENST00000493829 GOLT1BQ9Y3E0 138 aa14.1□□□□□ -0.15
USP39-218ENST00000493829 P01737 135 aa14.09□□□□□ -0.15
USP39-218ENST00000493829 PNRC1Q12796 327 aaPredicted RBP14.09□□□□□ -0.15
USP39-218ENST00000493829 C19orf71A6NCJ1 209 aa14.08□□□□□ -0.16
USP39-218ENST00000493829 ANXA2RQ3ZCQ2 193 aa14.08□□□□□ -0.16
USP39-218ENST00000493829 NUDT10Q8NFP7 164 aa14.08□□□□□ -0.16
USP39-218ENST00000493829 NUDT11Q96G61 164 aa14.08□□□□□ -0.16
USP39-218ENST00000493829 SFRP2Q96HF1 295 aa14.08□□□□□ -0.16
USP39-218ENST00000493829 MEGF8Q7Z7M0 2845 aa14.08□□□□□ -0.16
USP39-218ENST00000493829 RCHY1Q96PM5 261 aa14.07□□□□□ -0.16
USP39-218ENST00000493829 ZNF705GA8MUZ8 300 aaPredicted RBP14.07□□□□□ -0.16
USP39-218ENST00000493829 B4DEV8 164 aa14.07□□□□□ -0.16
USP39-218ENST00000493829 UBE2CO00762 179 aa14.07□□□□□ -0.16
USP39-218ENST00000493829 FAM159AQ6UWV7 190 aa14.07□□□□□ -0.16
USP39-218ENST00000493829 SBSPONQ8IVN8 264 aa14.07□□□□□ -0.16
USP39-218ENST00000493829 OR2D3Q8NGH3 330 aa14.07□□□□□ -0.16
USP39-218ENST00000493829 TP53TG3Q9ULZ0 132 aa14.07□□□□□ -0.16
USP39-218ENST00000493829 IGHV1OR15-1A0A075B7D0 117 aa14.06□□□□□ -0.16
USP39-218ENST00000493829 IGKV3D-20A0A0C4DH25 116 aa14.06□□□□□ -0.16
USP39-218ENST00000493829 CBY3A6NI87 242 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms