RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 SAA1P0DJI8 122 aaPredicted RBP0.62□□□□□ -2.31
CLK1-213ENST00000492793 SLC25A4P12235 298 aa0.62□□□□□ -2.31
CLK1-213ENST00000492793 RPL22P35268 128 aaKnown RBP0.62□□□□□ -2.31
CLK1-213ENST00000492793 SRP9P49458 86 aaKnown RBP0.62□□□□□ -2.31
CLK1-213ENST00000492793 C3orf62Q6ZUJ4 267 aa0.62□□□□□ -2.31
CLK1-213ENST00000492793 AKAP14Q86UN6 197 aa0.62□□□□□ -2.31
CLK1-213ENST00000492793 BRK1Q8WUW1 75 aa0.62□□□□□ -2.31
CLK1-213ENST00000492793 NAT14Q8WUY8 206 aa0.62□□□□□ -2.31
CLK1-213ENST00000492793 DLC1Q96QB1 1528 aa0.62□□□□□ -2.31
CLK1-213ENST00000492793 LOC285556D6RIA3 1793 aa0.62□□□□□ -2.31
CLK1-213ENST00000492793 KIAA1549LQ6ZVL6 1849 aa0.61□□□□□ -2.31
CLK1-213ENST00000492793 ANKRD30AQ9BXX3 1397 aa0.61□□□□□ -2.31
CLK1-213ENST00000492793 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.61□□□□□ -2.31
CLK1-213ENST00000492793 A0A0D9SG42 100 aa0.61□□□□□ -2.31
CLK1-213ENST00000492793 J3KT08 172 aa0.61□□□□□ -2.31
CLK1-213ENST00000492793 PDE6GP18545 87 aa0.61□□□□□ -2.31
CLK1-213ENST00000492793 SNRPD3P62318 126 aaKnown RBP0.61□□□□□ -2.31
CLK1-213ENST00000492793 BLCAPP62952 87 aa0.61□□□□□ -2.31
CLK1-213ENST00000492793 Q5XG85 94 aa0.61□□□□□ -2.31
CLK1-213ENST00000492793 ATOH7Q8N100 152 aa0.61□□□□□ -2.31
CLK1-213ENST00000492793 OR5A2Q8NGI9 324 aa0.61□□□□□ -2.31
CLK1-213ENST00000492793 OR51A4Q8NGJ6 313 aa0.61□□□□□ -2.31
CLK1-213ENST00000492793 CIB3Q96Q77 187 aaPredicted RBP0.61□□□□□ -2.31
CLK1-213ENST00000492793 LPAR5Q9H1C0 372 aa0.61□□□□□ -2.31
CLK1-213ENST00000492793 MYH1P12882 1939 aa0.61□□□□□ -2.31
CLK1-213ENST00000492793 FER1L6Q2WGJ9 1857 aa0.61□□□□□ -2.31
CLK1-213ENST00000492793 TRAV36DV7A0A075B6V5 113 aa0.6□□□□□ -2.31
CLK1-213ENST00000492793 LOC107986453A0A1B0GWG9 222 aa0.6□□□□□ -2.31
CLK1-213ENST00000492793 ARL5CA6NH57 179 aa0.6□□□□□ -2.31
CLK1-213ENST00000492793 DEGS1O15121 323 aa0.6□□□□□ -2.31
CLK1-213ENST00000492793 HBDP02042 147 aa0.6□□□□□ -2.31
CLK1-213ENST00000492793 CCL4P13236 92 aa0.6□□□□□ -2.31
CLK1-213ENST00000492793 SDC4P31431 198 aa0.6□□□□□ -2.31
CLK1-213ENST00000492793 OR8B8Q15620 311 aa0.6□□□□□ -2.31
CLK1-213ENST00000492793 C10orf111Q8N326 155 aa0.6□□□□□ -2.31
CLK1-213ENST00000492793 JPT1Q9UK76 154 aa0.6□□□□□ -2.31
CLK1-213ENST00000492793 MPC1Q9Y5U8 109 aa0.6□□□□□ -2.31
CLK1-213ENST00000492793 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.59□□□□□ -2.31
CLK1-213ENST00000492793 FGD6Q6ZV73 1430 aa0.59□□□□□ -2.31
CLK1-213ENST00000492793 A0A1B0GX51 115 aa0.59□□□□□ -2.31
CLK1-213ENST00000492793 IGHV3-30P01768 117 aa0.59□□□□□ -2.31
CLK1-213ENST00000492793 MT-ND4LP03901 98 aa0.59□□□□□ -2.31
CLK1-213ENST00000492793 SLC25A5P05141 298 aaKnown RBP0.59□□□□□ -2.31
CLK1-213ENST00000492793 IGHV3-30-5P0DP03 117 aa0.59□□□□□ -2.31
CLK1-213ENST00000492793 SPINK7P58062 85 aa0.59□□□□□ -2.31
CLK1-213ENST00000492793 QRFPP83859 136 aa0.59□□□□□ -2.31
CLK1-213ENST00000492793 CSAG1Q6PB30 78 aa0.59□□□□□ -2.31
CLK1-213ENST00000492793 IZUMO2Q6UXV1 221 aa0.59□□□□□ -2.31
CLK1-213ENST00000492793 OR8I2Q8N0Y5 310 aa0.59□□□□□ -2.31
CLK1-213ENST00000492793 PLAC4Q8WY50 150 aa0.59□□□□□ -2.31
CLK1-213ENST00000492793 USP54Q70EL1 1684 aa0.59□□□□□ -2.32
CLK1-213ENST00000492793 MED23Q9ULK4 1368 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 OVOS2A0A0G2JMS6 1433 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 A0A1B0GW64 132 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 A0A1W2PPB8 328 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 A0A1W2PRS3 328 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 KIR3DP1A8MWS1 328 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 UQCRQO14949 82 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 DPM2O94777 84 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 TNFSF15O95150 251 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 TCRAP04437 139 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 GTF2A1P52655 376 aaPredicted RBP0.58□□□□□ -2.32
CLK1-213ENST00000492793 CAV3P56539 151 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 DNAJB13P59910 316 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 TCTEX1D1Q8N7M0 179 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 PYDC1Q8WXC3 89 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 C19orf12Q9NSK7 152 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 DSPPQ9NZW4 1301 aa0.58□□□□□ -2.32
CLK1-213ENST00000492793 USP24Q9UPU5 2620 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 ARAP1Q96P48 1450 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 A6NN06 94 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 C9JAW5 83 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 EDF1O60869 148 aaKnown RBP0.57□□□□□ -2.32
CLK1-213ENST00000492793 PAEPP09466 180 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 SCTP09683 121 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 CMPK1P30085 196 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 ETV6P41212 452 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 LSM3P62310 102 aaKnown RBP0.57□□□□□ -2.32
CLK1-213ENST00000492793 CCSMST1Q4G0I0 132 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 TMEM244Q5VVB8 128 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 OTOSQ8NHW6 89 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 ASH1LQ9NR48 2969 aaKnown RBP0.57□□□□□ -2.32
CLK1-213ENST00000492793 SPANXA1Q9NS26 97 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 COMMD3Q9UBI1 195 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 HIGD1AQ9Y241 93 aa0.57□□□□□ -2.32
CLK1-213ENST00000492793 XIRP1Q702N8 1843 aaKnown RBP0.57□□□□□ -2.32
CLK1-213ENST00000492793 TMEM189A5PLL7 270 aa0.56□□□□□ -2.32
CLK1-213ENST00000492793 IFITM5A6NNB3 132 aa0.56□□□□□ -2.32
CLK1-213ENST00000492793 CDC42EP2O14613 210 aa0.56□□□□□ -2.32
CLK1-213ENST00000492793 GYPBP06028 91 aa0.56□□□□□ -2.32
CLK1-213ENST00000492793 SCGB1A1P11684 91 aa0.56□□□□□ -2.32
CLK1-213ENST00000492793 CKS2P33552 79 aa0.56□□□□□ -2.32
CLK1-213ENST00000492793 PCBD1P61457 104 aa0.56□□□□□ -2.32
CLK1-213ENST00000492793 PSPHP78330 225 aa0.56□□□□□ -2.32
CLK1-213ENST00000492793 HSD17B12Q53GQ0 312 aa0.56□□□□□ -2.32
CLK1-213ENST00000492793 TCTE3Q8IZS6 198 aa0.56□□□□□ -2.32
CLK1-213ENST00000492793 OR8J3Q8NGG0 315 aa0.56□□□□□ -2.32
CLK1-213ENST00000492793 SMIM7Q9BQ49 75 aa0.56□□□□□ -2.32
CLK1-213ENST00000492793 NAV3Q8IVL0 2385 aa0.56□□□□□ -2.32
CLK1-213ENST00000492793 CACNA1EQ15878 2313 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms