RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 LPAR5Q9H1C0 372 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 HSPB11Q9Y547 144 aa0.5□□□□□ -2.33
HMGB1P30-201ENST00000492455 NINQ8N4C6 2090 aa0.49□□□□□ -2.33
HMGB1P30-201ENST00000492455 A0A1W2PPB8 328 aa0.49□□□□□ -2.33
HMGB1P30-201ENST00000492455 A0A1W2PRS3 328 aa0.49□□□□□ -2.33
HMGB1P30-201ENST00000492455 ARL5CA6NH57 179 aa0.49□□□□□ -2.33
HMGB1P30-201ENST00000492455 KIR3DP1A8MWS1 328 aa0.49□□□□□ -2.33
HMGB1P30-201ENST00000492455 RPL37AP61513 92 aaKnown RBP0.49□□□□□ -2.33
HMGB1P30-201ENST00000492455 LSM3P62310 102 aaKnown RBP0.49□□□□□ -2.33
HMGB1P30-201ENST00000492455 DR1Q01658 176 aa0.49□□□□□ -2.33
HMGB1P30-201ENST00000492455 CSAG1Q6PB30 78 aa0.49□□□□□ -2.33
HMGB1P30-201ENST00000492455 Q6ZQY7 126 aa0.49□□□□□ -2.33
HMGB1P30-201ENST00000492455 TCTEX1D1Q8N7M0 179 aa0.49□□□□□ -2.33
HMGB1P30-201ENST00000492455 C19orf12Q9NSK7 152 aa0.49□□□□□ -2.33
HMGB1P30-201ENST00000492455 GPR98Q8WXG9 6306 aa0.49□□□□□ -2.33
HMGB1P30-201ENST00000492455 ASH1LQ9NR48 2969 aaKnown RBP0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 FGD6Q6ZV73 1430 aa0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 IFITM5A6NNB3 132 aa0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 BBIP1A8MTZ0 92 aa0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 J3KT08 172 aa0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 UQCRQO14949 82 aa0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 SULT1C4O75897 302 aa0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 SLC25A5P05141 298 aaKnown RBP0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 GYPBP06028 91 aa0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 KDELR1P24390 212 aa0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 GTF2A1P52655 376 aaPredicted RBP0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 SPINK9Q5DT21 86 aa0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 Q5XG85 94 aa0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 AP1S3Q96PC3 154 aa0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 CCL19Q99731 98 aa0.48□□□□□ -2.33
HMGB1P30-201ENST00000492455 MED23Q9ULK4 1368 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 DSPPQ9NZW4 1301 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 TRAV36DV7A0A075B6V5 113 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 A0A0D9SG42 100 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 A0A1B0GX51 115 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 TMEM189A5PLL7 270 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 NUPR2A6NF83 97 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 DEGS1O15121 323 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 TCRAP04437 139 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 PRB4P10163 310 aaPredicted RBP0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 SDC4P31431 198 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 ETV6P41212 452 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 QRFPP83859 136 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 C3orf62Q6ZUJ4 267 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 Q86TA4 180 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 COMMD3Q9UBI1 195 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 APCP25054 2843 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 ANKRD31Q8N7Z5 1873 aa0.47□□□□□ -2.33
HMGB1P30-201ENST00000492455 PTPRDP23468 1912 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 CDC42EP2O14613 210 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 EDF1O60869 148 aaKnown RBP0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 DPM2O94777 84 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 CKS2P33552 79 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 SNRPD3P62318 126 aaKnown RBP0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 OR8B8Q15620 311 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 ASB16-AS1Q495Z4 193 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 XAF1Q6GPH4 301 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 OR8I2Q8N0Y5 310 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 OTOSQ8NHW6 89 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 PLAC4Q8WY50 150 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 SMIM7Q9BQ49 75 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 C10orf95Q9H7T3 257 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 MRPL36Q9P0J6 103 aaKnown RBP0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 SPAG17Q6Q759 2223 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 OVOS2A0A0G2JMS6 1433 aa0.46□□□□□ -2.34
HMGB1P30-201ENST00000492455 FRAS1Q86XX4 4008 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 IGHV1-24A0A0C4DH33 117 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 TNFSF15O95150 251 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 MT-ND4LP03901 98 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 SCTP09683 121 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 CAV3P56539 151 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 PSPHP78330 225 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 RHOHQ15669 191 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 TMEM244Q5VVB8 128 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 LYPD5Q6UWN5 251 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 DEFB132Q7Z7B7 95 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 OR8J3Q8NGG0 315 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 SPANXA1Q9NS26 97 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 FER1L6Q2WGJ9 1857 aa0.45□□□□□ -2.34
HMGB1P30-201ENST00000492455 ARAP1Q96P48 1450 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 NBDYA0A0U1RRE5 68 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 A0A1B0GW64 132 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 TMEM30CPA0ZSE6 113 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 C9JAW5 83 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 IGF2P01344 180 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 IGKCP01834 107 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 PAEPP09466 180 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 PCBD1P61457 104 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 HSD17B12Q53GQ0 312 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 SPATA8Q6RVD6 105 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 C10orf99Q6UWK7 81 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 TMEM91Q6ZNR0 172 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 IDO2Q6ZQW0 420 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 Q6ZS92 163 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 AKAP14Q86UN6 197 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 LINC00208Q96KT6 92 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 SPANXCQ9NY87 97 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 MRPL35Q9NZE8 188 aaKnown RBP0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 METTL1Q9UBP6 276 aaKnown RBP0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 JPT1Q9UK76 154 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms